Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NR_133668.1
- Aligned Length:
- 2610
- Identities:
- 193
- Gaps:
- 2396
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CAGCCGTTGACGGCAGCGGCACGTGAAAGTACCGACCTTTCTGGCCTTTGTGACGGACCTTTGGAGGCGGGTGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTTCAGATTCGTGCGCTCCGGCCTTTCAGTGTCTCTGGAAGAAGACCAGCTACAAGGAAATACTTCTGAAAAAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CACTCTGAACCCCAAGCTGGAGTGAATCTTCTCCTGAGCTCTCTCATTCCAGAATGGCAATCTTGTTTCAGGAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGATCTCTAATAGTGACTGATGGTAAAGGAAGAAGGCTGTGCCTAGAACAAAGAATCAGGCTGGCAAAGAAATC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACAGGTCTTTCCTCAAACTTTAAATTGCTACTCTCTGGAGATAGCTACCTGGACTTTACAGAGCTGTCAGAAGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTTGGGAAGGTTTGCCAGCATTGGAAAAAGCCACTTGGACTTCACAGAGCTGTCAGAAGACTTAGGAAGCTTTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCAGTAGTTCCTGAGACCAGAAATACATATTATGAAGCAGGTGCTGGAACAGGCCCTGGCCCCTACTTGTGAAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTGCAGATATAGATGGTGTTACTGAGAAGGAAACTAAGGACTTGGCTCCAAAACAAAACAAAACAAAATCTGGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GATGCTGAATTTTGTTGGGGGGAATGTCTGTAGAACTGCAACATCAATGCAGTAAGTGTAGTAAAAGCTTTAGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTATGGTGAGTCATTACTCAGCATCATGGAGTCCACGATGAAGAGAATCTCTTTTCAATCTGTGCAATCAACAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTTTTTGAAAGGCTTTTGTTTATAGTGGAACCCTCTTTTCCCCCTAGAAGAACCACCACAAGGAAAAATGCTGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CACCATAAGGAATGTGGGAAAGTTTTCAGCCACATGGCCTTATTTGACTTCAAAGAATCCACATGAGAGAGAGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTGCATAAATGTAATAACTGAGGAGGCCTTTGTTCAGCAAAGAAACCTTATACAAACTCGTATAAAGAATGTAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAAGACCTTCACCCAGAAGCCAGGACTGACTGTGCACCAGAGAATCTGCACAATAAACATGATGAATGTGGAGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGCTTGCTTCAGCATTGGAGAATTCACAGTAAAGGGAAACCCTGCCAGTGTGATGAGTACGGAAAAGTCTTCAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGGTTGGAACTTGGGAAAAATCAGTGAGTGAATTCATATTAGAGAGGCTCTTATAAATGAGAGGATTGTGGAAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTTGTATAGACAGAGATCAGACCTCAACAAGGGAGCCTCCACAGTATTGAAAAGTTAATATAATTAATGTAAGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GGGCAAGTTGTATGGGGAATGGGTAGTCTAAATTGCTCATTTTAGCCAGTAAAAACATTAAATTAGTTTCTTAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ATCAAGAAAAGGAAATGTTAGAAGTTATTTTTCCCTTCCAGAGGGGTCTATATGTGTAAGCAACCAGGACTTTT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GAAATAAGTTGCATCTCTGGATTTGTGATCTGTCTCCTGGATGATTATCTCTGTTTTGGGAGACAGGTATTTTT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TCTTCATGCCTGCTCTAGTCTCATCTCATATCTTTAATTCATTCAGCAAGTATACACAATAGTATTATCGTCTA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CTGTTTGTTGTAAATATATATATATTATTTTCTTTTTGGTCTGAGTAGGCTTGTATTGGTACCCTAGGACATAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AAATCACATATATCATGTTTCAGTAAATGCAGTGAAAGGAACTATATTATTAAATTGCTGGGAATTTCTGTAAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TTTGAGACTACCTTTATATTCTCCAACACAAGACCGTGTAGGTGTCCCTTCAGAGAGTATATTTTTCTAGCTTG 1776
Query 1 ----------------------------ATGGAGTCT--CATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGA 44
||||||||| | |.|||||||||||.||||||||.|.|||||.||
Sbjct 1777 GCTTCTTTATTTTCTTTATTTTTTTGAGATGGAGTCTTGC-TCCTGTCGCCCAGGCTGGAGTGCAATGGCACGA 1849
Query 45 TCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGAT 117
||||||||||||||||||||.||||| |.||| |||||.||||||||||.|||.|.||||.|||||||||||||
Sbjct 1850 TCTCGGCTCACTGCAACCTCCGCCTC-CCAGGTTCAAGTGATTCTCCTGTCTCAGTCTCCCGAGTAGCTGGGAT 1922
Query 118 TACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCC 191
|||||||||..||.|||||.|||.||||| |||||||||||||||||||||.||||||||||||||||||||
Sbjct 1923 TACAGGCACTTGCCACCATTCCCAGCTAA---TTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCC 1993
Query 192 AGGCTGGTCTCGAACTCCTGACCTCAAG---------------------------------------------- 219
||||||||||||||||||||||||...|
Sbjct 1994 AGGCTGGTCTCGAACTCCTGACCTTGTGATCTGCCCACCTTGGCCTCCCAAAGTTCAGGGATTACAGGCATGAG 2067
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2068 CCACCATGCCCGGCTGTTTTTTTAAGATAGAAAAATATACTTCATGTATAGCCTATTGACAGATAATGACTGAT 2141
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2142 ATTTTTTCTTATAGATAACACATAATAAACATTGTGAAGACTAATAAGTAACTTGCTTATTCTTTTCAGTTCTA 2215
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2216 AAACCTGTAGGAAAGAATCTTTAGAAGCTGTCAACAAGTTGATAATGTAGCCCAATCTCTACCCATGATAGGAG 2289
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2290 AGTAAGGCTTATATATTTTATAGTAGGGCACTAAATACAGGAACCATGTATTTAAAAACTTTTTAGTGATTATC 2363
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2364 TCAGAATTCTAGGTGTCCCTCTGCTGTACATCCCTAAATTTTTTGCATAGGTATTATTAATAAATTCATTATTT 2437
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2438 TCAAAGATGGACTGTGTTCTGTAAAAAGCTTTTCCAGTATCTGCAAATCACACAGTTTTTTTTAACTCTATTAC 2511
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2512 TATTATATAAAATGATTTCTTAATATTGAACCAACCTTGCATTCCTAGAATAAACCTCACTTAGCCATGAAAAA 2585
Query 220 -------------------- 219
Sbjct 2586 AAAAAAAAAAAAAAAAAAAA 2605
