Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NR_133669.1
- Aligned Length:
- 2675
- Identities:
- 193
- Gaps:
- 2461
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CAGCCGTTGACGGCAGCGGCACGTGAAAGTACCGACCTTTCTGGCCTTTGTGACGGACCTTTGGAGGCGGGTGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTTCAGATTCGTGCGCTCCGGCCTTTCAGTGTCTCTGGTGAGGTTGGGCCTGATAGGTTGAGAGCTGCCAGGGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAGTTAAGGATGACTTCCAAGTTTTGAGGAAGAAGACCAGCTACAAGGAAATACTTCTGAAAAATCACTCTGAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCCCAAGCTGGAGTGAATCTTCTCCTGAGCTCTCTCATTCCAGAATGGCAATCTTGTTTCAGGAGAGATCTCTA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATAGTGACTGATGGTAAAGGAAGAAGGCTGTGCCTAGAACAAAGAATCAGGCTGGCAAAGAAATCACAGGTCTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCCTCAAACTTTAAATTGCTACTCTCTGGAGATAGCTACCTGGACTTTACAGAGCTGTCAGAAGACTTGGGAAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTTTGCCAGCATTGGAAAAAGCCACTTGGACTTCACAGAGCTGTCAGAAGACTTAGGAAGCTTTGCCAGTAGTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCTGAGACCAGAAATACATATTATGAAGCAGGTGCTGGAACAGGCCCTGGCCCCTACTTGTGAAGCTGCAGATA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TAGATGGTGTTACTGAGAAGGAAACTAAGGACTTGGCTCCAAAACAAAACAAAACAAAATCTGGAGATGCTGAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTTTGTTGGGGGGAATGTCTGTAGAACTGCAACATCAATGCAGTAAGTGTAGTAAAAGCTTTAGTTTATGGTGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTCATTACTCAGCATCATGGAGTCCACGATGAAGAGAATCTCTTTTCAATCTGTGCAATCAACAAGTTTTTGAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGGCTTTTGTTTATAGTGGAACCCTCTTTTCCCCCTAGAAGAACCACCACAAGGAAAAATGCTGTCACCATAAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GAATGTGGGAAAGTTTTCAGCCACATGGCCTTATTTGACTTCAAAGAATCCACATGAGAGAGAGACTGCATAAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGTAATAACTGAGGAGGCCTTTGTTCAGCAAAGAAACCTTATACAAACTCGTATAAAGAATGTAGGAAGACCTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CACCCAGAAGCCAGGACTGACTGTGCACCAGAGAATCTGCACAATAAACATGATGAATGTGGAGATGCTTGCTT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CAGCATTGGAGAATTCACAGTAAAGGGAAACCCTGCCAGTGTGATGAGTACGGAAAAGTCTTCAGAGGTTGGAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTTGGGAAAAATCAGTGAGTGAATTCATATTAGAGAGGCTCTTATAAATGAGAGGATTGTGGAAACTTGTATAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACAGAGATCAGACCTCAACAAGGGAGCCTCCACAGTATTGAAAAGTTAATATAATTAATGTAAGTGGGCAAGTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GTATGGGGAATGGGTAGTCTAAATTGCTCATTTTAGCCAGTAAAAACATTAAATTAGTTTCTTAGATCAAGAAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGGAAATGTTAGAAGTTATTTTTCCCTTCCAGAGGGGTCTATATGTGTAAGCAACCAGGACTTTTGAAATAAGT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TGCATCTCTGGATTTGTGATCTGTCTCCTGGATGATTATCTCTGTTTTGGGAGACAGGTATTTTTTCTTCATGC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CTGCTCTAGTCTCATCTCATATCTTTAATTCATTCAGCAAGTATACACAATAGTATTATCGTCTACTGTTTGTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GTAAATATATATATATTATTTTCTTTTTGGTCTGAGTAGGCTTGTATTGGTACCCTAGGACATAAAAATCACAT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ATATCATGTTTCAGTAAATGCAGTGAAAGGAACTATATTATTAAATTGCTGGGAATTTCTGTAAATTTGAGACT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ACCTTTATATTCTCCAACACAAGACCGTGTAGGTGTCCCTTCAGAGAGTATATTTTTCTAGCTTGGCTTCTTTA 1850
Query 1 -------------------ATGGAGTCT--CATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTC 53
||||||||| | |.|||||||||||.||||||||.|.|||||.|||||||||||
Sbjct 1851 TTTTCTTTATTTTTTTGAGATGGAGTCTTGC-TCCTGTCGCCCAGGCTGGAGTGCAATGGCACGATCTCGGCTC 1923
Query 54 ACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCAC 126
|||||||||||.||||| |.||| |||||.||||||||||.|||.|.||||.||||||||||||||||||||||
Sbjct 1924 ACTGCAACCTCCGCCTC-CCAGGTTCAAGTGATTCTCCTGTCTCAGTCTCCCGAGTAGCTGGGATTACAGGCAC 1996
Query 127 ACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTC 200
..||.|||||.|||.||||| |||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 1997 TTGCCACCATTCCCAGCTAA---TTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTC 2067
Query 201 TCGAACTCCTGACCTCAAG------------------------------------------------------- 219
|||||||||||||||...|
Sbjct 2068 TCGAACTCCTGACCTTGTGATCTGCCCACCTTGGCCTCCCAAAGTTCAGGGATTACAGGCATGAGCCACCATGC 2141
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2142 CCGGCTGTTTTTTTAAGATAGAAAAATATACTTCATGTATAGCCTATTGACAGATAATGACTGATATTTTTTCT 2215
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2216 TATAGATAACACATAATAAACATTGTGAAGACTAATAAGTAACTTGCTTATTCTTTTCAGTTCTAAAACCTGTA 2289
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2290 GGAAAGAATCTTTAGAAGCTGTCAACAAGTTGATAATGTAGCCCAATCTCTACCCATGATAGGAGAGTAAGGCT 2363
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2364 TATATATTTTATAGTAGGGCACTAAATACAGGAACCATGTATTTAAAAACTTTTTAGTGATTATCTCAGAATTC 2437
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2438 TAGGTGTCCCTCTGCTGTACATCCCTAAATTTTTTGCATAGGTATTATTAATAAATTCATTATTTTCAAAGATG 2511
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2512 GACTGTGTTCTGTAAAAAGCTTTTCCAGTATCTGCAAATCACACAGTTTTTTTTAACTCTATTACTATTATATA 2585
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2586 AAATGATTTCTTAATATTGAACCAACCTTGCATTCCTAGAATAAACCTCACTTAGCCATGAAAAAAAAAAAAAA 2659
Query 220 ----------- 219
Sbjct 2660 AAAAAAAAAAA 2670
