Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NR_134458.1
- Aligned Length:
- 3043
- Identities:
- 190
- Gaps:
- 2829
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTTCTCGTGGTGTCTTGTGGGAGTGGCGGTGCGATCCCTCTCAGACTTGTGAGTCCCTGCTGGAGTCAGAAGTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTAGGCGAATCCCAGGCGCGCCAAGGAAAGTGCTACAAAAGCCATCCATCTTGCAAGCGTTGGTGCCGAGGCGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AACGCTGAGAACGCAAATACTAAAGGGCGCTGTTCTTTCCTCGTGGAGCTCACAGTCCGCTGGGGAGACCGTGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GATGACAGCAGAGAAACTAGCGCGATCAGTAGTACTCAGCGCAAGGACAGCGAGCAGAGAAGGCAAACCTAGTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTTGCTAAGGAAGACTTCACAGAGGAGGTAGTGTCAGGGCCGAGACTAGGAGAAGGATTCAGACAGCCCTGATT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCTATTCCAATGTCATCACAAACCCCCAGGATGCTTGGAAGGCCAAGGAATCAAGGTCAGCTGTATCCACAGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTAGTCTCAAGCCTTCATCCTCTTACCCGATAGCAGGCGATTCCCAGTCCTAGCCAGATAGATGAGCCCCAGTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCAGGAAGATGAAGTGCATCTCAGAAGCATCCACTACAAAGCTAATGGTTCGTTCATAGCATGCCTTGGCCTCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAATGATTTCCACTCAGAAAATAGAGATGGCCCTTCAGGCCCCAGACATTGGGGTTCTGGGAAAGTGAAAAGCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGTAGTATATGGGATAAGGTAGTATTTAAAAGTACCTTGATGATCTTTGTTTAACATTTAAATTTAGATAGATT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTCCATTTCCTTTCTCTTTTCTTTTTCAGATCAACCGTTTTCTTTTTCTAAGAGCACTCAGAAACATAACCATT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TAATTGTACAAGGAGACATTTTTCTAGCTCTGCCCTCAGATTTCTTTCTTGCATTCTTCAAAGCCATTTTGGGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTGGAGTAAATATTAAGAAAAACATTCAAGCATAACCCCAATACTGTTCACATGAGAAAATATAAGAAATCTAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAAAATTGAAATAAACACTATCAGCTAAAGATATCCTTTTCTCTGCTCTTTGCAAAACTCATGATTACTTTATT 1036
Query 1 ----------------ATGGAGTCT--CATTCTGTCGCCCAGACTG--GAGTGAAGTGGCATGATCTCGGCTCA 54
||||||||| || |||||||||||.||| |||||.|.||||...|||||.|||||
Sbjct 1037 ATTATTATTTTTTGAGATGGAGTCTTGCA--CTGTCGCCCAGGCTGGAGAGTGCAATGGCTCAATCTCCGCTCA 1108
Query 55 CTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACA 127
||||||||||.||||| |.||| |||.||||.|||||||||||..|||||.||||||||||||||||||||||.
Sbjct 1109 CTGCAACCTCCGCCTC-CCAGGTTCAGGCGAGTCTCCTGCCTCACCCTCCTGAGTAGCTGGGATTACAGGCACC 1181
Query 128 CGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCT 201
.||.||||.||||..|||| |||||||||||||||||||||||||||||||||.|||||||||||||||||||
Sbjct 1182 TGCCACCACGCCCATCTAA--TTTTTTGTATTTTTAGTAGAGATGGGGTTTCACTATGTTGGCCAGGCTGGTCT 1253
Query 202 CGAACTCCTGACCTCAAG-------------------------------------------------------- 219
.||||||||||||||..|
Sbjct 1254 TGAACTCCTGACCTCGTGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGCGATTACAGTTGTGAGCCACCGCGCC 1327
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1328 CAGCCAACTCATGATTACTTAAGAAAAGCAAATGGAAGGGTATAGAGAGATGAGTTTACTGACAGCTGATGACC 1401
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1402 ACCCTTCTGTTCACCAGAAATCTACGTGTGATATGGCATCACCACCTTTAAATAAAGCCCCTTCTCCAGACTCA 1475
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1476 AGAGGCTTTAGCAAAAGTCATTACCAGGTAGTCCATCTGGGCTGCTTGTTGAAGGTATTCCTCTGCCTTGGCAA 1549
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1550 AGTTCTTCTTAAGAATGTGTGTTTGGGCCAGCACCAAGTAATATTCACAGCTGGGGCCTCCTTGAGGGCATAAC 1623
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1624 AGCTCATGTGCAAGCACTCTGTGCACATACTGCAAGGATAATCAGATTATAAGCAACATATAAATGGCTGCATT 1697
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1698 GCGTCTTTTTCGGTTGAAGGATTCTGTCTCTGATAATAAATAATACGAAATGTATTACAGAATGAAATAATTAT 1771
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1772 CCTCAACTTCAAAAGGTAAAGGGTGAATTACAAACATTCTGCACTTCATAGTTCCATTACCAGCTATTCACCTA 1845
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1846 GTCACCAAATGAAGACATTACCAAGTGAATAACTTGCAATATTGTACAATTCTGGTCTTGCTGGTCATCATACT 1919
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1920 AGGTGAGTGTTAGACTGCATGTATTATGCAGCAGACAAAGGCACATCATCAACCACCCCATTTACAAAGGAGGT 1993
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1994 AACATTTTCAGGCAGCTGACATTGTAAGGAAACTTAAGTGAGGTAAAACTGCCTTTCTAACAATCTAGACTTGA 2067
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2068 AATCTTAGAAACATAAATGTCTGTTTTGGATCCACCTCCAAACATTGGTTATGTTTACCAGTTTTGTAGTTTGG 2141
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2142 GTCAATTTTTGTATTTTGTTTTTTTTTTTTTCTTTTTTTAGAGACAGGGTCTTACTCTGTCACCCAGGGCTGCT 2215
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2216 TACTGCAGCCTTCTGGCCTCAAGCAATCCTCCTGCCTTGGCTTCCCAAAAGTGCTGGAATTATAGGGGTGAGCC 2289
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2290 CCATGCCTGGCCAAATCTTTGCTTTTTACACTTTATAAGACCTACAAAATTAACAAAGTTAGATATACTTCTTA 2363
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2364 AGTCGAGGGTAAATCCTTCTTTTCATCTCCCACTGTTCCCATCTCAGCCTATAATGTAGAAAATTCTACATTAT 2437
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2438 ACTTACACCTTTTTAGGAGAATACTAGAGGGAACAGCTGCAGCTATTTTTTCCACCTGCCTTCTGGGTCTCTGA 2511
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2512 CCTGGGGGAGCTAATGACTTATTTAGCTGTGGAAGAAGAGAGTCTGTTTCTATTTTGCGGAGGGTTAATGTGTT 2585
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2586 AAAGCCTCCTGCTTAATGTGGCTCAATCCCACCCAGTTAATAATTCTTGCCCTTTCTTGAGCTTGCCTGCCCTT 2659
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2660 GAGTAGGGCATGCACTTGGCAGGATCAAAACCAAACACTCCTGGCTCCTGAGTCTTGATCTCTCCTACTGCTTG 2733
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2734 CTCATGAATATGCTTCTTTCTTCCCATGTAATAGGCAGACTTCCTAGAATGCTCTTCTTCTCTGAGAGGAGGCT 2807
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2808 TCAATTCTTCAGCTGCTCTACCTGTGACTGCATGGGTAAGTCAAATGTGGGGCTAGTTATGTTGTCCAGCCAAG 2881
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2882 TTTTACCAATAAAAATAAGCTAATATTTTTATTCCCCCACATAGTACTGTGTATGTTTCTAGTTGGATCTAACC 2955
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2956 TAGAAGGGAAGAAGGGAATGATTTGGCTCCTGTGAACCCCCAACACTCACAAAATGAATTCCCATAATAAAGTG 3029
Query 220 --------- 219
Sbjct 3030 ATATCAGGC 3038
