Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12783
Subject:
NR_134458.1
Aligned Length:
3043
Identities:
190
Gaps:
2829

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TTTCTCGTGGTGTCTTGTGGGAGTGGCGGTGCGATCCCTCTCAGACTTGTGAGTCCCTGCTGGAGTCAGAAGTT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTAGGCGAATCCCAGGCGCGCCAAGGAAAGTGCTACAAAAGCCATCCATCTTGCAAGCGTTGGTGCCGAGGCGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AACGCTGAGAACGCAAATACTAAAGGGCGCTGTTCTTTCCTCGTGGAGCTCACAGTCCGCTGGGGAGACCGTGA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GATGACAGCAGAGAAACTAGCGCGATCAGTAGTACTCAGCGCAAGGACAGCGAGCAGAGAAGGCAAACCTAGTG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTTGCTAAGGAAGACTTCACAGAGGAGGTAGTGTCAGGGCCGAGACTAGGAGAAGGATTCAGACAGCCCTGATT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GCTATTCCAATGTCATCACAAACCCCCAGGATGCTTGGAAGGCCAAGGAATCAAGGTCAGCTGTATCCACAGCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CTAGTCTCAAGCCTTCATCCTCTTACCCGATAGCAGGCGATTCCCAGTCCTAGCCAGATAGATGAGCCCCAGTC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TCAGGAAGATGAAGTGCATCTCAGAAGCATCCACTACAAAGCTAATGGTTCGTTCATAGCATGCCTTGGCCTCA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GAATGATTTCCACTCAGAAAATAGAGATGGCCCTTCAGGCCCCAGACATTGGGGTTCTGGGAAAGTGAAAAGCA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AGTAGTATATGGGATAAGGTAGTATTTAAAAGTACCTTGATGATCTTTGTTTAACATTTAAATTTAGATAGATT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GTCCATTTCCTTTCTCTTTTCTTTTTCAGATCAACCGTTTTCTTTTTCTAAGAGCACTCAGAAACATAACCATT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TAATTGTACAAGGAGACATTTTTCTAGCTCTGCCCTCAGATTTCTTTCTTGCATTCTTCAAAGCCATTTTGGGT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GTGGAGTAAATATTAAGAAAAACATTCAAGCATAACCCCAATACTGTTCACATGAGAAAATATAAGAAATCTAG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AAAAATTGAAATAAACACTATCAGCTAAAGATATCCTTTTCTCTGCTCTTTGCAAAACTCATGATTACTTTATT  1036

Query    1  ----------------ATGGAGTCT--CATTCTGTCGCCCAGACTG--GAGTGAAGTGGCATGATCTCGGCTCA  54
                            |||||||||  ||  |||||||||||.|||  |||||.|.||||...|||||.|||||
Sbjct 1037  ATTATTATTTTTTGAGATGGAGTCTTGCA--CTGTCGCCCAGGCTGGAGAGTGCAATGGCTCAATCTCCGCTCA  1108

Query   55  CTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACA  127
            ||||||||||.||||| |.||| |||.||||.|||||||||||..|||||.||||||||||||||||||||||.
Sbjct 1109  CTGCAACCTCCGCCTC-CCAGGTTCAGGCGAGTCTCCTGCCTCACCCTCCTGAGTAGCTGGGATTACAGGCACC  1181

Query  128  CGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCT  201
            .||.||||.||||..||||  |||||||||||||||||||||||||||||||||.|||||||||||||||||||
Sbjct 1182  TGCCACCACGCCCATCTAA--TTTTTTGTATTTTTAGTAGAGATGGGGTTTCACTATGTTGGCCAGGCTGGTCT  1253

Query  202  CGAACTCCTGACCTCAAG--------------------------------------------------------  219
            .||||||||||||||..|                                                        
Sbjct 1254  TGAACTCCTGACCTCGTGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGCGATTACAGTTGTGAGCCACCGCGCC  1327

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1328  CAGCCAACTCATGATTACTTAAGAAAAGCAAATGGAAGGGTATAGAGAGATGAGTTTACTGACAGCTGATGACC  1401

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1402  ACCCTTCTGTTCACCAGAAATCTACGTGTGATATGGCATCACCACCTTTAAATAAAGCCCCTTCTCCAGACTCA  1475

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1476  AGAGGCTTTAGCAAAAGTCATTACCAGGTAGTCCATCTGGGCTGCTTGTTGAAGGTATTCCTCTGCCTTGGCAA  1549

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1550  AGTTCTTCTTAAGAATGTGTGTTTGGGCCAGCACCAAGTAATATTCACAGCTGGGGCCTCCTTGAGGGCATAAC  1623

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1624  AGCTCATGTGCAAGCACTCTGTGCACATACTGCAAGGATAATCAGATTATAAGCAACATATAAATGGCTGCATT  1697

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1698  GCGTCTTTTTCGGTTGAAGGATTCTGTCTCTGATAATAAATAATACGAAATGTATTACAGAATGAAATAATTAT  1771

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1772  CCTCAACTTCAAAAGGTAAAGGGTGAATTACAAACATTCTGCACTTCATAGTTCCATTACCAGCTATTCACCTA  1845

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1846  GTCACCAAATGAAGACATTACCAAGTGAATAACTTGCAATATTGTACAATTCTGGTCTTGCTGGTCATCATACT  1919

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1920  AGGTGAGTGTTAGACTGCATGTATTATGCAGCAGACAAAGGCACATCATCAACCACCCCATTTACAAAGGAGGT  1993

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1994  AACATTTTCAGGCAGCTGACATTGTAAGGAAACTTAAGTGAGGTAAAACTGCCTTTCTAACAATCTAGACTTGA  2067

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2068  AATCTTAGAAACATAAATGTCTGTTTTGGATCCACCTCCAAACATTGGTTATGTTTACCAGTTTTGTAGTTTGG  2141

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2142  GTCAATTTTTGTATTTTGTTTTTTTTTTTTTCTTTTTTTAGAGACAGGGTCTTACTCTGTCACCCAGGGCTGCT  2215

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2216  TACTGCAGCCTTCTGGCCTCAAGCAATCCTCCTGCCTTGGCTTCCCAAAAGTGCTGGAATTATAGGGGTGAGCC  2289

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2290  CCATGCCTGGCCAAATCTTTGCTTTTTACACTTTATAAGACCTACAAAATTAACAAAGTTAGATATACTTCTTA  2363

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2364  AGTCGAGGGTAAATCCTTCTTTTCATCTCCCACTGTTCCCATCTCAGCCTATAATGTAGAAAATTCTACATTAT  2437

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2438  ACTTACACCTTTTTAGGAGAATACTAGAGGGAACAGCTGCAGCTATTTTTTCCACCTGCCTTCTGGGTCTCTGA  2511

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2512  CCTGGGGGAGCTAATGACTTATTTAGCTGTGGAAGAAGAGAGTCTGTTTCTATTTTGCGGAGGGTTAATGTGTT  2585

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2586  AAAGCCTCCTGCTTAATGTGGCTCAATCCCACCCAGTTAATAATTCTTGCCCTTTCTTGAGCTTGCCTGCCCTT  2659

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2660  GAGTAGGGCATGCACTTGGCAGGATCAAAACCAAACACTCCTGGCTCCTGAGTCTTGATCTCTCCTACTGCTTG  2733

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2734  CTCATGAATATGCTTCTTTCTTCCCATGTAATAGGCAGACTTCCTAGAATGCTCTTCTTCTCTGAGAGGAGGCT  2807

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2808  TCAATTCTTCAGCTGCTCTACCTGTGACTGCATGGGTAAGTCAAATGTGGGGCTAGTTATGTTGTCCAGCCAAG  2881

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2882  TTTTACCAATAAAAATAAGCTAATATTTTTATTCCCCCACATAGTACTGTGTATGTTTCTAGTTGGATCTAACC  2955

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2956  TAGAAGGGAAGAAGGGAATGATTTGGCTCCTGTGAACCCCCAACACTCACAAAATGAATTCCCATAATAAAGTG  3029

Query  220  ---------  219
                     
Sbjct 3030  ATATCAGGC  3038

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