Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12783
Subject:
NR_134881.1
Aligned Length:
3043
Identities:
188
Gaps:
2828

Alignment

Query    1  -------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGC  67
                   |||||||||....|||||||||||.||||||||.|.||||.|||||||||||||||||||||||  |
Sbjct    1  TTTTGAGATGGAGTCTTGCCCTGTCGCCCAGGCTGGAGTGCAATGGCGTGATCTCGGCTCACTGCAACCTC--C  72

Query   68  CTCT-CGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCC  139
            .||| |.||| ||||||.|||||||||||||..|||||.||||||||||||||||||||....||.||||.|||
Sbjct   73  ATCTCCCAGGTTCAAGCAATTCTCCTGCCTCCACCTCCCGAGTAGCTGGGATTACAGGCGTGTGCCACCACGCC  146

Query  140  CGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGAC  213
            |||||||  .|||||||||.|||||||||||||||||||||.|||.||||||||||||||||.|||||||||||
Sbjct  147  CGGCTAA--CTTTTTGTATCTTTAGTAGAGATGGGGTTTCAGCATCTTGGCCAGGCTGGTCTTGAACTCCTGAC  218

Query  214  CTCAAG--------------------------------------------------------------------  219
            |||..|                                                                    
Sbjct  219  CTCGTGATCCACCTACCTCGGCCTTCCAAAGTGCTGGAATTATAGGCGTGAGCCACCAAGCCCGGCCTCCTCTT  292

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  293  TATTTTTTATTTTGATTTATTTATTTTTGAGATGGGGGGGGTGTCTCGCTATGTTGACCAGGCTGGTCTCGAAC  366

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  367  TCCTGGCCTCAAGCAGTTCTCCCTTCTTGGCCTCCCAAAGTGCTGGGATTACAGACATTAGCCACGGCGCCTGG  440

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  441  CCTTTTTCTTCTTCTTCTTCTTTGTTGAGACAGGGTCTCAATCTGTTGCCCAGGCTGGTCTCCAACTCCTGGGC  514

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  515  TCAGGTGATCCTTCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCATTAAGTGTTCCCCTTAAT  588

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  589  GACACAGCAGATGAGAGTTTTACTGAGTATCTCCTTGTGCCAGGCACCCTGTTGTTGCTGGGGAAGCGGAAGGG  662

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  663  AGAGACAATCGTTAATCGGCTAAATTTCTGCCTTCTGAGAGCTCAGAATCAAGAAATAAATAATAGGGCAGTAA  736

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  737  AAGGGGCTGGGATTACATACAAAAAGAAAATTAATGCCTGAACTTTTTACAATCTGCTCGATAAGCTTTAATTC  810

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  811  TATTAACCTATTTGAGCTTCCCAACAACAGGCAAGCTCCCACAGCAGCTAGGAGGATCACTTTGTCGTCATACA  884

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  885  AATAGAAACAGGCTCAGAGAGGAAGTCATTTGTTCTAGTTCTCACTAGGACAAATCTACTGGCTACTAAAAAAG  958

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  959  TGTGAAGGCTGGGGACAGTTTGAGTCGTCCTGCTTGCACCTTAAGCGCCTACAAGAGTGCCCGGCTATAACAAC  1032

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1033  CACAATACCAATAATAAAATTTAAAAACAGATGTTCAGTAAGGACTTGCGGCATTAGGACCCCAGGAGGGAAGT  1106

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1107  GACGTTCGAGGAGGCGGAGAAAGCCGCGAAGACGGCCTTCCCCACATCTTCCAGCACCTGCGCGCCTGAATCCG  1180

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1181  TCCCACCCAGGCCCAGACGCAGGCTTCTTCTCGGGTCTTGGTCCTGCATCCTCTCTCTCCCAGAGCCTCCGTTA  1254

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1255  GGGGGTGGGAAAGGACTTTGCCATAGGTCGCTGAGGCCACCATCTGCTCTCTTACTGGCCAAGGGCGTAAAAAG  1328

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1329  ATAGTCTTCCCATTAGCTAGAGAGCAAACCCCAGAAAGCCTATTGGCTGCGCCGTCCGCGGGCCTTGGTCCGCT  1402

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1403  TTGAAGGCGGGCTGCGGCTGCGAGAGGAGGGCGGGCGGGAGGCTAGCTGTTGTCGTGGTTGCTCGGAGGCACGT  1476

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1477  GTGCAGTCCCGGAAGCGGCGAGGGGAAACTGCTCCGCGCGCGCCGCGGGAGGAGGAACCGCCCGGTCCTTTAGG  1550

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1551  GTCCGGGCCCGGCCGGGCCATGGATTCAATGCCTGAGCCCGCGTCCCGCTGTCTTCTGCTTCTTCCCTTGCTGC  1624

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1625  TGCTGCTGCTGCTGCTGCTGCCGGCCCCGGAGCTGGGCCCGAGCCAGGCCGGAGCTGAGGAGAACGACTGGGTT  1698

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1699  CGCCTGCCCAGCAAATGCGAAGGCTTGCGCCGGGACGCTGCGGCGGACGAGAGATCTGGTCCCGGTACCCCTGG  1772

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1773  AGTTCACACATTGTGTGTAAATATGTTGCTGTGGAGCTGAAGTCAGCCTTTGAGGAAACCGGCAAGACCAAGGA  1846

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1847  GGTGATTGGCACGGGCTATGGCATCCTGGACCAGAAGGCCTCTGGAGTCAAATACACCAAGTCCATTTCAGATC  1920

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1921  CCCCAGACCAGATGACCTATCTTCCTTCCAGCTCTGAGTCACTTCCCATTGGGACTTGCGGTTAATCGAAGTCA  1994

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1995  CTGAGACCATTTGCAAGAGGCTCCTGGATTATAGCCTGCACAAGGAGAGGACCGGCAGCAATCGATTTGCCAAG  2068

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2069  GGCATGTCAGAGACCTTTGAGACATTACACAACCTGGTACACAAAGGGGTCAAGGTGGTGATGGACATCCCCTA  2142

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2143  TGAGCTGTGGAACGAGACTTCTGCAGAGGTGGCTGACCTCAAGAAGCAGTGTGATGTGCTGGTGGAAGAGTTTG  2216

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2217  AGGAGGTGATCGAGGACTGGTACAGGAACCACCAGGAGGAAGACCTGACTGAATTCCTCTGCGCCAACCACGTG  2290

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2291  CTGAAGGGAAAAGACACCAGTTGCCTGGCAGAGCAGTGGTCCGGCAAGAAGGGAGACACAGCTGCCCTGGGAGG  2364

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2365  GAAGAAGTCCAAGAAGAAGAGCAGCAGGGCCAAGGCAGCAGGCGGCAGGAGTAGCAGCAGCAAACAAAGGAAGG  2438

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2439  AGCTGGGTGGCCTTGAGGGAGACCCCAGCCCCGAGGAGGATGAGGGCATCCAGAAGGCATCCCCTCTCACACAC  2512

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2513  AGCCCCCCTGATGAGCTCTGAGCCCACCCAGCATCCTCTGTCCTGAGACCCCTGATTTTGAAGCTGAGGAGTCA  2586

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2587  GGGGCATGGCTCTGGCAGGCCGGGATGGCCCCGCAGCCTTCAGCCCCTCCTTGCCTTGGCTGTGCCCTCTTCTG  2660

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2661  CCAAGGAAAGACACAAGCCCCAGGAAGAACTCAGAGCCGTCATGGGTAGCCCACGCCGTCCTTTCCCCTCCCCA  2734

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2735  AGTGTTTCTCTCCTGACCCAGGGTTCAGGCAGGCCTTGTGGTTTCAGGACTGCAAGGACTCCAGTGTGAACTCA  2808

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2809  GGAGGGGCAGGTGTCAGAACTGGGCACCAGGACTGGAGCCCCCTCCGGAGACCAAACTCACCATCCCTCAGTCC  2882

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2883  TCCCCAACAGGGTACTAGGACTGCAGCCCCCTGTAGCTCCTCTCTGCTTACCCCTCCTGTGGACACCTTGCACT  2956

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2957  CTGCCTGGCCCTTCCCAGAGCCCAAAGAGTAAAAATGTTCTGGTTCTGATTTCTGAGTCCTCTGCAGCCCTCAA  3030

Query  220  ---------  219
                     
Sbjct 3031  AAAAAAAAA  3039

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