Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12783
Subject:
NR_135551.1
Aligned Length:
1976
Identities:
188
Gaps:
1760

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TCTTTCCAGAGGAGGAACACGGAAAAATCAGCCTTGTGGGTGAACAGGAGGAGAGTCACATTCGCCAGCAGGCA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCACCCTGTGCAGGCAGTGGGAGAAATCTGAGCTTCAGCAGCGTCCGGAGCAGGATTTGCACGAAGTCTCCCGT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TTCAAGTTTTATGTCTCCTGGAGTCCTGGGGAAGGCACCCAGCCCACCCACAGCTCCCTTCTCAGAGCCCTAAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AATTGATGAGAAAGCCCCTCACTACCACATGCAGGACACGCAGAAACTTCAGATGAGTGGACTGGTCACGTGAT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ACAGCAATGACAAAAACTTCAGTATTGGCATTCATTCCAGCTGATGGCATTCCAGGAGCTTTTAATGAATTAAA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GCCACATTTGCCTGAAGAAGCCAGCGAAGTTACTAACTGGTTCAAAAACGATTATGTGCATGATGGGCAGTATT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GTTGCAGTTCAATCACCAGTATTGCTTCCACCAGATTTGTGGTCTATATATGTGTGCATATGGAATAGATTTCC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ACAGACCCACAACACGGAAGCATGGCACAGAAGATGGGAAAAAATGGGGAATACTCATGTAGTTGTATACTAAA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CCATAGAAGAATTTTGAAAAGAGCAGTGTCACATGGAAAATAAATGTGAACATATTCTCCAAGGACAGCCATGT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CGTAAAAGAAAAAAAGCAGCTATTTTTTGTGATGTGAGACTTAAAAATATAGTTAATGACTGTGAAAGTTGGCC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AGCTCTTATGGACTATCTCCATGCAATTGCCCATAATCTAGCTCCATAACTTTTTTATTTGTTGAATTTTCTTT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TTAGTTTTTAGTTTTTATTTTTAGTTTTTTTCACTATTTGAAATTGTCAGCATTATTTTTTTATAATTCGCCAT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GCTACCTATTTCATCTTTGCATCATTTCCAATACTGCATGCATCGTATAAAGAGTTTTAGAGAGTCCTAATTTG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CTTTGTGCATTTTTGCAAATGTAACTCCATGAAAGTGCATTTTCAAAATGTTGAACTTGTGTGTAAGCAGTATG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TGTGTGCATAAAGACATTAAAACTTCCTCGACAAATGAAAATGTATCTTCTTTGTACATCTGCTTTTATGAAAG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  ATAAAATTTCTCAATGCCTTGGCTCTTTGGGCAACTGATGTGGTGGTGATATGGTAGTGACTCATCACGGTTTT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TGATCAATCTTATCAAAAGACTTAGAAGAGTCTAAGAATCACAGCATTTCAGATGACTGCTGTATAAAGCTGGG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GGCACACAATTACCAACCACAGTGTGATATACATTTTTATATTTTGCTTTTTGATTTATTTATTTATGAATATG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GTTCATCTGCTCATAACTGTTATACCCATGTGACTGTTGTTAGTATATCTGAGTGTTTCTGCTTGCAAAAATAT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GGTATTATTGTCCATTTTATTGTGTAAAGTAGCCTATGAAGAGTTCTGTCATGTTTTTGCATGTTTCTTAAATA  1480

Query    1  ----------------------------------------------------------------ATGGAGTCTC  10
                                                                            |.||||||||
Sbjct 1481  AATCCCCTTTAAAAATGTAAGTAAATATTTTACAACGTTTTGAAAACTTTTTTTTTTTTTTAAGACGGAGTCTC  1554

Query   11  -------ATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGT  77
                   .|..|||.||||||.||||||||.|||||||..||||||||||||||||||.||..||||..|.|.|
Sbjct 1555  GCTTTTTTTGTTGTTGCCCAGGCTGGAGTGCAGTGGCACAATCTCGGCTCACTGCAACATCCACCTCCTGGGTT  1628

Query   78  CAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTT  151
            |||||||||||||||||||.||||||.|||||||||||||||||||||..|||.||||||||.||||||   ||
Sbjct 1629  CAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATCCGCCACCATGCCTGGCTAA---TT  1699

Query  152  TTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------  219
            ||||||||||||||||||||||||||||.|||||||||||||||||||.|.|||||||||.||||..|      
Sbjct 1700  TTTGTATTTTTAGTAGAGATGGGGTTTCGCCATGTTGGCCAGGCTGGTTTTGAACTCCTGGCCTCTGGTGATCC  1773

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1774  GCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACACCCGGCTGAAAAAGTTTTTTCTAA  1847

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1848  AATATTTTTGGAATTTTGTTTTTCAGGATTTTAACATTGGGGATGATGGCATTTGGGATTATGGTCAGCTCCCA  1921

Query  220  ----------------------------------------------------  219
                                                                
Sbjct 1922  TCTTGGACTTCTGGCCTCTAGAATTGTGAGAAAATAAATATCTGTGATTTAA  1973

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