Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NR_135557.1
- Aligned Length:
- 2791
- Identities:
- 188
- Gaps:
- 2575
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGCGTTGGTACGTGCTTTGGTGCAGGGCCTCTTCTCGAGCGCTGATTTCCAGGGTGCTGTTCCAGATGCCATAT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCAAAATAAATGAGCAGACCTGTGGGGCGAGGGGAAAGGTACAGATAAGTAAACTGAGGCCCAAAGAAGTTAAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TAAATTTCCCAAAGTCACAAGACAAAGGAGGGGCAGAGCTGTGATTTGAAGTTGGTGCTGTTTGACTCCAAAGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGCTTCAGTTGTCAGGATGTTTACACGGAAGAAGCACTGGACCAGTTATGCTGGGCTCCTGTTTCTACTCCATC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCTGTAGATTCAGCATCCTTGTTTCTAAAATAAAAGTATTACACCAAAGACTCTCTTACGGATCTCCTAACTCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GACCCTCTAGGATTCCATCTGTTATATTGAACTTTGTAGTATTTTTTGCTGCAAAATCTGTTGAGCACAGCTTA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCTTTTCTTTTACATCAGTTACAATATTGTTCAGTATTATGGAGATGCTGTCAGGGATAGTGAAGCTGTTTGTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCTACATTAAATGGCCCAGTCTGTTATTTATTTTGAGTTCCTATGTCAGCCCTCCTCCCCTTGCTTTGTAAATG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TAGCTTTCCATCTCCTTCCTTGATGTCAGACTGTCAGTTTTTACTTCTTGTTGCTGTCCCAGTGCTTACCTGGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCAGTCAGACTGCCTCTTTTCTAAATTGCTGCTTCCAACACCTGATATTTAAATTGTTAGAGTGAGTCTAAAAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TAAGAGGAAATGGTCTTTGAAGAAGGCCTGAAGAACTCTTCCATGGGGAAAGTATAGAGTGTGCACGCATTAAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TACAAGAACCTGATGATATTTTCTTGGATGCCGTGTGTTTTCAGGGTTCTCGGGAGTTGAGTTTGCACATACGG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATTAGGTTGCTCTTTCAGTGATGTGTGAGGAAGGAAGTGAAGATGCAACTCACTTCCCTGCTTTGGTATTGGAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCACAGCATTATCCAATTACTCCTATATTCTATGAGCTTATTCTCATCACCCAACTTTACCACCTGATATTGTA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CAAGATTTATAAGTAAAATCTTTTCCAAATGATGCTTTTGAAGCAGGCATCGATTTGATTGCAAATTTAATTTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GAGAGCCAATATTTATGGAATTTGTGCAATCAAACATTCTCTCCATAACATTCGATCTGACAAATTAAATTTAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAATACCCCCATTTTGCCACCAGAATACACTTGCCAAGGGTAATTAGCAAATGGCCAAGTCTTCATTAGGTCTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GTGAATGGACCAGTCCATTGCTGTCTGAATCAGAGAAAGAGGCCCTGGCTGTGCATGGTATAAGGAGCATTTGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AATCTTAGTCATTTCCCAAGGTCCTGCTGGGGTCCTAATGACTGTAGTTTGGGGAGAACACTGGGAAAATCAAT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CAGGCACTAACCATACAAGACAATTTCTGCTTCACGAAATCGTTGTTTTGGACACACTGTAAAAGATCTTATAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TATTTTAAAATCTTTCTGATTTGTTTGTATGGAGAAATTCAGACTTAGAGTGGGTACTAGAGAGCATCTAGCCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGCATTGAAGCTCACTGGTGATAATTGAATGTTTACAGCCTCAAATATCCTGAGAAAAATGTTCTCATTCAACT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ATTTTAAAATATCTGGTATGTAAGAGGAACACATTTAAGAGTATCTTTCTAATTTCAATAAGAAATTAAAAGCA 1702
Query 1 --------------------------------------------------ATGGAGTCTCATTCTGTCGCCCAG 24
|||||||.|||.||||||||||||
Sbjct 1703 TGGAAATGGAATTTTATTTTATTTTTTTAATTTTTTTTAAATTTTTTTAGATGGAGTTTCACTCTGTCGCCCAG 1776
Query 25 ACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGG 98
.||||||||.|||||..||||||.||||||.|||||||||..||||..|.|.||||||.|||||||||||||.|
Sbjct 1777 GCTGGAGTGCAGTGGTGTGATCTTGGCTCAATGCAACCTCCACCTCCTGGGTTCAAGCCATTCTCCTGCCTCAG 1850
Query 99 CCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATG 172
|||||..|||||||.|||.||||||||..|.|.||.|||||.|||||| |||||||||||||||||||||||
Sbjct 1851 CCTCCCAAGTAGCTAGGACTACAGGCATGCACCACTATGCCTGGCTAA---TTTTTGTATTTTTAGTAGAGATG 1921
Query 173 GGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG--------------------------- 219
|||||||.|||||||||||||||||||||||||.|||||||||||||
Sbjct 1922 GGGTTTCTCCATGTTGGCCAGGCTGGTCTCGAAGTCCTGACCTCAAGTGATCCTCCTGCTTCAGCCTTCCAAAG 1995
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1996 TACTGGGATTACAGCGTGAGCCACTGCGCCCGGCGAAACCTTGGTTTTTATCCTAGATTATCTAGGGTCCTAGA 2069
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2070 TTACTGAGTGTTGAGGGGCAAGTTACCCTCTTATGGATGAAATGAGACGGCCAATTAGATACAGTTTAGGGTCC 2143
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2144 CTTCTGATGCATCATTCTTTGGTTTTACAGCTAAAGTCAACTCTTAATCATCTAGTTAGTGAGGGAAGCCCTGT 2217
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2218 AGGAAATACTGTATGAACCAATGGTTCTCAGTGAAGGTGGTACTGACTCCTAGGGGAATTTTGGAAATATGTGG 2291
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2292 GAGTGTCTACGGTTCTCATGATGATTGTGGGCACTTGTGGCATTAAGTGGACAGGGACCTGGGCTGTTTATCAT 2365
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2366 TCTGCAATGTGACTGACTCACAGAATGAAGCTCTGTCTTGTATCATATATGACTGCTGATGGCCCCAGTGGACA 2439
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2440 TTCATTTAAGTACAAACCTGTTTATAATTTTTGAACTTGAATTTATCTCCATTTTACATATACACACAAAGCAT 2513
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2514 TTTTTTTTTTGCATGGCTTTTTAGACATTGAATTTTCCAGGACTGCAACAGCTGGGTAAATTGAGAGACAGTTG 2587
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2588 TCTCTTGTTTGGTTTGGAATTTACCGACTTGATCATCATTTTGGAAGACCATCATCAACAACAATGTTATTCAT 2661
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2662 GGACTTTGAGCATCAAATAACTGTCCTATATGAGTCTGCATTTGTGGCAGTTGTACTCACAGTGGTTCTACAAA 2735
Query 220 ----------------------------------------------------- 219
Sbjct 2736 TGACTGCAAACAACTGACGACTTCGTTGCGTCTCCTAATGTACGCATGCCCCA 2788
