Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12783
Subject:
NR_135557.1
Aligned Length:
2791
Identities:
188
Gaps:
2575

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGCGTTGGTACGTGCTTTGGTGCAGGGCCTCTTCTCGAGCGCTGATTTCCAGGGTGCTGTTCCAGATGCCATAT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCAAAATAAATGAGCAGACCTGTGGGGCGAGGGGAAAGGTACAGATAAGTAAACTGAGGCCCAAAGAAGTTAAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TAAATTTCCCAAAGTCACAAGACAAAGGAGGGGCAGAGCTGTGATTTGAAGTTGGTGCTGTTTGACTCCAAAGC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TGCTTCAGTTGTCAGGATGTTTACACGGAAGAAGCACTGGACCAGTTATGCTGGGCTCCTGTTTCTACTCCATC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCTGTAGATTCAGCATCCTTGTTTCTAAAATAAAAGTATTACACCAAAGACTCTCTTACGGATCTCCTAACTCT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GACCCTCTAGGATTCCATCTGTTATATTGAACTTTGTAGTATTTTTTGCTGCAAAATCTGTTGAGCACAGCTTA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GCTTTTCTTTTACATCAGTTACAATATTGTTCAGTATTATGGAGATGCTGTCAGGGATAGTGAAGCTGTTTGTC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TCTACATTAAATGGCCCAGTCTGTTATTTATTTTGAGTTCCTATGTCAGCCCTCCTCCCCTTGCTTTGTAAATG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TAGCTTTCCATCTCCTTCCTTGATGTCAGACTGTCAGTTTTTACTTCTTGTTGCTGTCCCAGTGCTTACCTGGA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GCAGTCAGACTGCCTCTTTTCTAAATTGCTGCTTCCAACACCTGATATTTAAATTGTTAGAGTGAGTCTAAAAT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TAAGAGGAAATGGTCTTTGAAGAAGGCCTGAAGAACTCTTCCATGGGGAAAGTATAGAGTGTGCACGCATTAAA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TACAAGAACCTGATGATATTTTCTTGGATGCCGTGTGTTTTCAGGGTTCTCGGGAGTTGAGTTTGCACATACGG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ATTAGGTTGCTCTTTCAGTGATGTGTGAGGAAGGAAGTGAAGATGCAACTCACTTCCCTGCTTTGGTATTGGAT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CCACAGCATTATCCAATTACTCCTATATTCTATGAGCTTATTCTCATCACCCAACTTTACCACCTGATATTGTA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CAAGATTTATAAGTAAAATCTTTTCCAAATGATGCTTTTGAAGCAGGCATCGATTTGATTGCAAATTTAATTTG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GAGAGCCAATATTTATGGAATTTGTGCAATCAAACATTCTCTCCATAACATTCGATCTGACAAATTAAATTTAA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  AAATACCCCCATTTTGCCACCAGAATACACTTGCCAAGGGTAATTAGCAAATGGCCAAGTCTTCATTAGGTCTT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GTGAATGGACCAGTCCATTGCTGTCTGAATCAGAGAAAGAGGCCCTGGCTGTGCATGGTATAAGGAGCATTTGG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  AATCTTAGTCATTTCCCAAGGTCCTGCTGGGGTCCTAATGACTGTAGTTTGGGGAGAACACTGGGAAAATCAAT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  CAGGCACTAACCATACAAGACAATTTCTGCTTCACGAAATCGTTGTTTTGGACACACTGTAAAAGATCTTATAA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TATTTTAAAATCTTTCTGATTTGTTTGTATGGAGAAATTCAGACTTAGAGTGGGTACTAGAGAGCATCTAGCCT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GGCATTGAAGCTCACTGGTGATAATTGAATGTTTACAGCCTCAAATATCCTGAGAAAAATGTTCTCATTCAACT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  ATTTTAAAATATCTGGTATGTAAGAGGAACACATTTAAGAGTATCTTTCTAATTTCAATAAGAAATTAAAAGCA  1702

Query    1  --------------------------------------------------ATGGAGTCTCATTCTGTCGCCCAG  24
                                                              |||||||.|||.||||||||||||
Sbjct 1703  TGGAAATGGAATTTTATTTTATTTTTTTAATTTTTTTTAAATTTTTTTAGATGGAGTTTCACTCTGTCGCCCAG  1776

Query   25  ACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGG  98
            .||||||||.|||||..||||||.||||||.|||||||||..||||..|.|.||||||.|||||||||||||.|
Sbjct 1777  GCTGGAGTGCAGTGGTGTGATCTTGGCTCAATGCAACCTCCACCTCCTGGGTTCAAGCCATTCTCCTGCCTCAG  1850

Query   99  CCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATG  172
            |||||..|||||||.|||.||||||||..|.|.||.|||||.||||||   |||||||||||||||||||||||
Sbjct 1851  CCTCCCAAGTAGCTAGGACTACAGGCATGCACCACTATGCCTGGCTAA---TTTTTGTATTTTTAGTAGAGATG  1921

Query  173  GGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG---------------------------  219
            |||||||.|||||||||||||||||||||||||.|||||||||||||                           
Sbjct 1922  GGGTTTCTCCATGTTGGCCAGGCTGGTCTCGAAGTCCTGACCTCAAGTGATCCTCCTGCTTCAGCCTTCCAAAG  1995

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1996  TACTGGGATTACAGCGTGAGCCACTGCGCCCGGCGAAACCTTGGTTTTTATCCTAGATTATCTAGGGTCCTAGA  2069

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2070  TTACTGAGTGTTGAGGGGCAAGTTACCCTCTTATGGATGAAATGAGACGGCCAATTAGATACAGTTTAGGGTCC  2143

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2144  CTTCTGATGCATCATTCTTTGGTTTTACAGCTAAAGTCAACTCTTAATCATCTAGTTAGTGAGGGAAGCCCTGT  2217

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2218  AGGAAATACTGTATGAACCAATGGTTCTCAGTGAAGGTGGTACTGACTCCTAGGGGAATTTTGGAAATATGTGG  2291

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2292  GAGTGTCTACGGTTCTCATGATGATTGTGGGCACTTGTGGCATTAAGTGGACAGGGACCTGGGCTGTTTATCAT  2365

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2366  TCTGCAATGTGACTGACTCACAGAATGAAGCTCTGTCTTGTATCATATATGACTGCTGATGGCCCCAGTGGACA  2439

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2440  TTCATTTAAGTACAAACCTGTTTATAATTTTTGAACTTGAATTTATCTCCATTTTACATATACACACAAAGCAT  2513

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2514  TTTTTTTTTTGCATGGCTTTTTAGACATTGAATTTTCCAGGACTGCAACAGCTGGGTAAATTGAGAGACAGTTG  2587

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2588  TCTCTTGTTTGGTTTGGAATTTACCGACTTGATCATCATTTTGGAAGACCATCATCAACAACAATGTTATTCAT  2661

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2662  GGACTTTGAGCATCAAATAACTGTCCTATATGAGTCTGCATTTGTGGCAGTTGTACTCACAGTGGTTCTACAAA  2735

Query  220  -----------------------------------------------------  219
                                                                 
Sbjct 2736  TGACTGCAAACAACTGACGACTTCGTTGCGTCTCCTAATGTACGCATGCCCCA  2788

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