Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NR_136206.1
- Aligned Length:
- 3351
- Identities:
- 189
- Gaps:
- 3135
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGGAAGTCGGCGGCGGTGGCGGAGGCGGTGAGTGCGCGGCTCCGGGGCTGGCCGACTCCGCTAGTGGCCCGGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCTGGGCTCGGGGGCTCCGGGCTCTGGGCTCTGGGTGCGCGGACCGGGCCAGGCTGCTTGAAGACCTCGCGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTGTGTCAGCAGAGCCGCCCTGCACCACCATGTGCATCATCTTCTTTAAGTTTGATCCTCGCCCTGTTTCCAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAACGCGTACAGGCTCATCTTGGCAGCCAACAGGGATGAATTCTACAGCCGACCCTCCAAGTTAGCTGACTTCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGGAGGAAGGCAAGGAAGGAGGCACATGGCTGGGCATC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGCACACGTGGCAAGCTGGCAGCACTCACCAACTACCTGCAGCCGCAGCTGGACTGGCAGGCCCGAGGGCGAGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CACCTACGGGCTGAGCAACGCGCTGCTGGAGACTCCCTGGAGGAAGCTGTGCTTTGGGAAGCAGCTCTTCCTGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGGCTGTGGAACGGAGCCAGGCGCTGCCCAAGGATGTGCTCATCGCCAGCCTCCTGGATGTGCTCAACAATGAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAGGCGTGAGTGGGCGGGTCCTGCTGGGGCAGCTGCCAGACCCGGCCATCGAGGACCAGGGTGGGGAGTACGTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAGCCCATGCTGAGCAAGTACGCGGCTGTGTGCGTGCGCTGCCCTGGCTACGGCACCAGAACCAACACTATCAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCTGGTAGATGCGGACGGCCACGTGACCTTCACTGAGCGTAGCATGATGGACAAGGACCTCTCCCACTGGGAGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCAGAACCTATGAGTTCACACTGCAGAGCTAACCCCACCTCTGGGCCTGGCCAGTGGGCTCCTGGGGGGCCCTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCTTGAGGGGCACTGTGGACAGGAAACCTTCCTTTGCCATACTGCATTGCACTGCCCGTGGCTTGGCCAGCATC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCCCGGATCAGGGCCCTGTGGTTTGCGTGTTACCCATCTGTGTCCCCATGCCCAGTTCAGGGTCTGCCTTTATG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCAGTGAGGAGCAGCAGAGTCTGATACTAGGTCTAGGACCGGCCGAGGTATACCATGAACATGTGGATACACCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GAGCCCACTCTTGCACATGTACACAGGCACTCACATGGCACACACATACACTCCTGCGTGTGCACAAGCACACA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CATGCAAGCCATATACATGGACACCGACACAGGCACATGTACGTGCACAGGTGTGCTACACATGTGCACACATG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CACAGTTGCACAGACACACACACACAGGTGCACACACACGATGCCGAACAAGGCAGAAGGGCGACTCTCACCTC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TCATGTGCTTCTGGCCAGTAGGTCTTTGTTCTGGTCCAACGACAGGAGTAGGCTTGTATTTAAAAGCGGCCCCT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CCTCTCCTGTGGCCACAGAACACAGGCGTGCTTGGACTCTTGACAAGCAGACCTGCTCCTGCAGAGGAGACAGC 1480
Query 1 ------------------------------------------------------------------ATGGAGTC 8
|.||||||
Sbjct 1481 CACATTTGGAATTGGGCACCGAGAAGACCTGAGAAAAACCCACTCTCTCTTTTTTTTTTTTTTGAGACGGAGTC 1554
Query 9 TCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGC 82
|...||||||.|||||.||||||||.|||||||.||||||||||||||||||||||.|||||.|.||.||||||
Sbjct 1555 TTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAACCTCCGCCTCCCAAGTTCAAGC 1628
Query 83 GATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGT 156
.|||||||||||.|.||||||.||.|||||||||||||||||....||.|||||||||.||||| |||||||
Sbjct 1629 AATTCTCCTGCCCCAGCCTCCTGATTAGCTGGGATTACAGGCGTGTGCCACCATGCCCAGCTAA---TTTTTGT 1699
Query 157 ATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGA----------------CC 214
.|||||||||||||.||||||||||||||||||.|||||||||||.|||||||||| ||
Sbjct 1700 GTTTTTAGTAGAGACGGGGTTTCACCATGTTGGTCAGGCTGGTCTTGAACTCCTGACGTGGTGATCCACCTGCC 1773
Query 215 TC---------AAG------------------------------------------------------------ 219
|| |||
Sbjct 1774 TCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCTGGCCGAAAAACCCACTCTCATAACAGAA 1847
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1848 GTGCAGACTCATTGCTAGATTCAGTGCCCTTGAGTGTGCCAGAGGTCCTCTGTGTTTGAGACAATCCTGTGTGT 1921
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1922 GCCAGGAGGCTCCGTGTGCACCAGGGGCTCTCAGAATCCCGCTTACCCAGCTGGAGACCATGCCTCTGGCAGCC 1995
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1996 CCATCTCAGCCAGCCCTGCTCTCTCCCTCTTCCCTCCAGGTGAGGCAAACTTCATAGGAATCTGTACCTGAATG 2069
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2070 TGAGCTCCTGATAATAAAACTCTGAGGCTTTGGTGAGCGCATTTCGAGGCCTTTCCCTTGTATGCAGGGTGCCA 2143
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2144 GTGGGAGCTGCTATGTCTCCTGTGCAGCCAGACACCCTGGACGAGGCCCTTCCCACCTCCCCCTTTCCTCACGG 2217
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2218 CTTCTTCAGCACCACATGTGGATGCCTGTGGGTCAGTCCATCTGTCCATGGGCAGGGGCCGCTGTGAGAGACCC 2291
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2292 CATGCGCGTGGGATGTGGTAGATGCTGATTATGGGGCCAGCCACCCATACAGGTCTATCAGGTCGCAATGGAGG 2365
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2366 CCCCACTGGAGCGGGAGGCAGGCTGGCCTGGACTTCTGTTGGATGATGGGGGCCAGGGGATGGTAGGAGGGGCA 2439
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2440 GGAGAGCAGGTCTGCATCTGTCTCAGCCCCAGGAGCTCCTGGTTTGGGGCCAGCTCTAAGGAGCTTCATCCCTG 2513
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2514 AGCCTGGCCGAGTATAAGGGGGTCCCGGATATCCAATGCTGAGACCTAGACTTTTCTAAGCCTCTGCACCCAAC 2587
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2588 CCCTAACTTGGCCTTTTCAGACCCATGAGAGTGCAGGGTGGGTGTGGACCTGCGCCAGGGCTTCCCAGCCTGAT 2661
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2662 TGTGACATGATGTGAGTCCACCTAGGGAGGAGCAGGGGCCTCCCCGTCTCTTCCCCTTCTTGCCCAGACCACTT 2735
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2736 TGCTGGGCTCAGAGCCTTCCATGGCTCACTTTGAACTCAGAAGAGTTTCCCAGCTGCGACCCAGGCTGCACCCC 2809
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2810 CAGGCCTGAGGAGAAACTGAGGCCCCACATCCCATACGTGTCCTCTGAGTCAGGACAACAGGCTCCCGGCTGGG 2883
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2884 GGCACTGCCCTTGCTGCCAACACATTCACCTGCCCCAGTGGCTACCATGTCCTGTGCCGGTGACCAGTGCCAGT 2957
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2958 CCCCAACCTGGATGGTGCCCTGCCCTCATGAAGAGCCCCCCGGATGTTCACCTCTGCCCAGAGACCCGGCCTGC 3031
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3032 CCAGGAAGAGCAGTCTCTGCTCTTGTGTGGGTCCCTCTGCCCCCACCCTGCCCAGGGCTCCCCAGCAGCCTGAG 3105
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3106 GCCCCTAAGGAAGAACAGCCCTCAATGGTGATTCTATTGGTGTTATGAGTTGTGTCCCCAAAGAGATATATCAG 3179
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3180 TGTCCTGACCCACAGTACCTCAGAATGTGACTGCATTTGGAGATAGGGTTCTTCCAGGGGTAACCAAGGTAGAA 3253
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3254 TGAGGTCGTTAGTGTGGGCCCTAATCCAATATGACGGCTATCCTTATAAAAAGAGGAACATTTAGGCTGGATAC 3327
Query 220 --------------------- 219
Sbjct 3328 AGTGGCTCATGCCTATAATCC 3348
