Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NR_136211.1
- Aligned Length:
- 3537
- Identities:
- 189
- Gaps:
- 3321
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGGAAGTCGGCGGCGGTGGCGGAGGCGGTGAGTGCGCGGCTCCGGGGCTGGCCGACTCCGCTAGTGGCCCGGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCTGGGCTCGGGGGCTCCGGGCTCTGGGCTCTGGGTGCGCGGACCGGGCCAGGCTGCTTGAAGACCTCGCGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTGTGTCAGCAGAGCCGCCCTGCACCACCATGTGCATCATCTTCTTTAAGTTTGATCCTCGCCCTGTTTCCAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAACGCGTACAGGCTCATCTTGGCAGCCAACAGGGATGAATTCTACAGCCGACCCTCCAAGTTAGCTGACTTCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGGAGGAAGGCAAGGAAGGAGGCACATGGCTGGGCATC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGCACACGTGGCAAGCTGGCAGCACTCACCAACTACCTGCAGCCGCAGCTGGACTGGCAGGCCCGAGGGCGAGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGAACTTGTCACCCACTTTCTGACCACTGACGTGGACAGCTTGTCCTACCTGAAGAAGGTCTCTATGGAGGGCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATCTGTACAATGGCTTCAACCTCATAGCAGCCGACCTGAGCACAGCAAAGGGAGACGTCATTTGCTACTATGGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AACCGAGGGGAGCCTGATCCTATCGTTTTGACGCCAGGCACCTACGGGCTGAGCAACGCGCTGCTGGAGACTCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTGGAGGAAGCTGTGCTTTGGGAAGCAGCTCTTCCTGGAGGCTGTGGAACGGAGCCAGGCGCTGCCCAAGGATG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGCTCATCGCCAGCCTCCTGGATGTGCTCAACAATGAAGAGGCGTGAGTGGGCGGGTCCTGCTGGGGCAGCTGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CAGACCCGGCCATCGAGGACCAGGGTGGGGAGTACGTGCAGCCCATGCTGAGCAAGTACGCGGCTGTGTGCGTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CGCTGCCCTGGCTACGGCACCAGAACCAACACTATCATCCTGGTAGATGCGGACGGCCACGTGACCTTCACTGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCGTAGCATGATGGACAAGGACCTCTCCCACTGGGAGACCAGAACCTATGAGTTCACACTGCAGAGCTAACCCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACCTCTGGGCCTGGCCAGTGGGCTCCTGGGGGGCCCTGCCTTGAGGGGCACTGTGGACAGGAAACCTTCCTTTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCATACTGCATTGCACTGCCCGTGGCTTGGCCAGCATCCCCCGGATCAGGGCCCTGTGGTTTGCGTGTTACCCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCTGTGTCCCCATGCCCAGTTCAGGGTCTGCCTTTATGCCAGTGAGGAGCAGCAGAGTCTGATACTAGGTCTAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GACCGGCCGAGGTATACCATGAACATGTGGATACACCTGAGCCCACTCTTGCACATGTACACAGGCACTCACAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGCACACACATACACTCCTGCGTGTGCACAAGCACACACATGCAAGCCATATACATGGACACCGACACAGGCAC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATGTACGTGCACAGGTGTGCTACACATGTGCACACATGCACAGTTGCACAGACACACACACACAGGTGCACACA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CACGATGCCGAACAAGGCAGAAGGGCGACTCTCACCTCTCATGTGCTTCTGGCCAGTAGGTCTTTGTTCTGGTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CAACGACAGGAGTAGGCTTGTATTTAAAAGCGGCCCCTCCTCTCCTGTGGCCACAGAACACAGGCGTGCTTGGA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CTCTTGACAAGCAGACCTGCTCCTGCAGAGGAGACAGCCACATTTGGAATTGGGCACCGAGAAGACCTGAGAAA 1702
Query 1 ------------------------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGA 44
|.|||||||...||||||.|||||.||||||||.|||||||.||
Sbjct 1703 AACCCACTCTCTCTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCACGA 1776
Query 45 TCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATT 118
||||||||||||||||||||.|||||.|.||.||||||.|||||||||||.|.||||||.||.|||||||||||
Sbjct 1777 TCTCGGCTCACTGCAACCTCCGCCTCCCAAGTTCAAGCAATTCTCCTGCCCCAGCCTCCTGATTAGCTGGGATT 1850
Query 119 ACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCA 192
||||||....||.|||||||||.||||| |||||||.|||||||||||||.||||||||||||||||||.||
Sbjct 1851 ACAGGCGTGTGCCACCATGCCCAGCTAA---TTTTTGTGTTTTTAGTAGAGACGGGGTTTCACCATGTTGGTCA 1921
Query 193 GGCTGGTCTCGAACTCCTGA----------------CCTC---------AAG---------------------- 219
|||||||||.|||||||||| |||| |||
Sbjct 1922 GGCTGGTCTTGAACTCCTGACGTGGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGC 1995
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1996 CACCACGCCTGGCCGAAAAACCCACTCTCATAACAGAAGTGCAGACTCATTGCTAGATTCAGTGCCCTTGAGTG 2069
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2070 TGCCAGAGGTCCTCTGTGTTTGAGACAATCCTGTGTGTGCCAGGAGGCTCCGTGTGCACCAGGGGCTCTCAGAA 2143
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2144 TCCCGCTTACCCAGCTGGAGACCATGCCTCTGGCAGCCCCATCTCAGCCAGCCCTGCTCTCTCCCTCTTCCCTC 2217
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2218 CAGGTGAGGCAAACTTCATAGGAATCTGTACCTGAATGTGAGCTCCTGATAATAAAACTCTGAGGCTTTGGTGA 2291
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2292 GCGCATTTCGAGGCCTTTCCCTTGTATGCAGGGTGCCAGTGGGAGCTGCTATGTCTCCTGTGCAGCCAGACACC 2365
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2366 CTGGACGAGGCCCTTCCCACCTCCCCCTTTCCTCACGGCTTCTTCAGCACCACATGTGGATGCCTGTGGGTCAG 2439
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2440 TCCATCTGTCCATGGGCAGGGGCCGCTGTGAGAGACCCCATGCGCGTGGGATGTGGTAGATGCTGATTATGGGG 2513
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2514 CCAGCCACCCATACAGGTCTATCAGGTCGCAATGGAGGCCCCACTGGAGCGGGAGGCAGGCTGGCCTGGACTTC 2587
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2588 TGTTGGATGATGGGGGCCAGGGGATGGTAGGAGGGGCAGGAGAGCAGGTCTGCATCTGTCTCAGCCCCAGGAGC 2661
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2662 TCCTGGTTTGGGGCCAGCTCTAAGGAGCTTCATCCCTGAGCCTGGCCGAGTATAAGGGGGTCCCGGATATCCAA 2735
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2736 TGCTGAGACCTAGACTTTTCTAAGCCTCTGCACCCAACCCCTAACTTGGCCTTTTCAGACCCATGAGAGTGCAG 2809
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2810 GGTGGGTGTGGACCTGCGCCAGGGCTTCCCAGCCTGATTGTGACATGATGTGAGTCCACCTAGGGAGGAGCAGG 2883
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2884 GGCCTCCCCGTCTCTTCCCCTTCTTGCCCAGACCACTTTGCTGGGCTCAGAGCCTTCCATGGCTCACTTTGAAC 2957
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2958 TCAGAAGAGTTTCCCAGCTGCGACCCAGGCTGCACCCCCAGGCCTGAGGAGAAACTGAGGCCCCACATCCCATA 3031
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3032 CGTGTCCTCTGAGTCAGGACAACAGGCTCCCGGCTGGGGGCACTGCCCTTGCTGCCAACACATTCACCTGCCCC 3105
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3106 AGTGGCTACCATGTCCTGTGCCGGTGACCAGTGCCAGTCCCCAACCTGGATGGTGCCCTGCCCTCATGAAGAGC 3179
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3180 CCCCCGGATGTTCACCTCTGCCCAGAGACCCGGCCTGCCCAGGAAGAGCAGTCTCTGCTCTTGTGTGGGTCCCT 3253
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3254 CTGCCCCCACCCTGCCCAGGGCTCCCCAGCAGCCTGAGGCCCCTAAGGAAGAACAGCCCTCAATGGTGATTCTA 3327
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3328 TTGGTGTTATGAGTTGTGTCCCCAAAGAGATATATCAGTGTCCTGACCCACAGTACCTCAGAATGTGACTGCAT 3401
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3402 TTGGAGATAGGGTTCTTCCAGGGGTAACCAAGGTAGAATGAGGTCGTTAGTGTGGGCCCTAATCCAATATGACG 3475
Query 220 ----------------------------------------------------------- 219
Sbjct 3476 GCTATCCTTATAAAAAGAGGAACATTTAGGCTGGATACAGTGGCTCATGCCTATAATCC 3534
