Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NR_136511.2
- Aligned Length:
- 3181
- Identities:
- 193
- Gaps:
- 2967
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTTTTGATGGGTTCCGGGTCCCAAAAGGGTTCGAGGCCTCTTGCCTTCGCTCCGTAGGAGGGAGTTCTCTTCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCCTGGGGGCCGCAGGACTGTCCAGGAATACAGTTTCCAGGTGAGATCTTACTTGAAACACCGGTAGTTCTA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCACAGCTAAAATGGCATCTACTTGGGCTATCCAGGCCCACATGGACCAGGATGAACCTTTGGAAGTAAAGATA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGGAAGAGAAATATACCACCAGACAGGATTGGGACCTGCGTAAAAACAACACCCATAGCAGAGAGGTCTTCCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCAGTACTTCAGACAGTTCTGCTACCAGGAGACATCTGGTCCCCGTGAGGCTTTGAGCCGACTCCGAGAACTTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCCATCAGTGGCTGAGGCCAGAGACCCACACCAAAGAACAGATTCTGGAGCTGCTGGTGCTGGAGCAGTTCCTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACCATCCTACCTGAGGAGCTCCAGGCCTGGGTGCAGGAGCAGCATCCAGAGAGTGGGGAGGAGGTGGTGACTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCTGGAGGATTTAGAGAGAGAACTGGATGAACCAGGAGAGCAGGTCTCAGTCCACACTGGGGAACAGGAAATGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCTTGCAGGAGACGGTACGTCTACGAAAAGAAGGAGAACCCAGTATGTCCCTCCAGTCCATGAAAGCCCAGCCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAGTATGAATCTCCAGAACTTGAATCCCAACAGGAGCAAGGAAGAAGACCAGCTACAAGGAAATACTTCTGAAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AATCACTCTGAACCCCAAGCTGGAGTGAATCTTCTCCTGAGCTCTCTCATTCCAGAATGGCAATCTTGTTTCAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAGAGATCTCTAATAGTGACTGATGGTAAAGGAAGAAGGCTGTGCCTAGAACAAAGAATCAGGCTGGCAAAGAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATCACAGGTCTTTCCTCAAACTTTAAATTGCTACTCTCTGGAGATAGCTACCTGGACTTTACAGAGCTGTCAGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGACTTGGGAAGGTTTGCCAGCATTGGAAAAAGCCACTTGGACTTCACAGAGCTGTCAGAAGACTTAGGAAGCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTGCCAGTAGTTCCTGAGACCAGAAATACATATTATGAAGCAGGTGCTGGAACAGGCCCTGGCCCCTACTTGTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAGCTGCAGATATAGATGGTGTTACTGAGAAGGAAACTAAGGACTTGGCTCCAAAACAAAACAAAACAAAATCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGAGATGCTGAATTTTGTTGGGGGGAATGTCTGTAGAACTGCAACATCAATGCAGTAAGTGTAGTAAAAGCTTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGTTTATGGTGAGTCATTACTCAGCATCATGGAGTCCACGATGAAGAGAATCTCTTTTCAATCTGTGCAATCAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CAAGTTTTTGAAAGGCTTTTGTTTATAGTGGAACCCTCTTTTCCCCCTAGAAGAACCACCACAAGGAAAAATGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGTCACCATAAGGAATGTGGGAAAGTTTTCAGCCACATGGCCTTATTTGACTTCAAAGAATCCACATGAGAGAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGACTGCATAAATGTAATAACTGAGGAGGCCTTTGTTCAGCAAAGAAACCTTATACAAACTCGTATAAAGAATG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TAGGAAGACCTTCACCCAGAAGCCAGGACTGACTGTGCACCAGAGAATCTGCACAATAAACATGATGAATGTGG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGATGCTTGCTTCAGCATTGGAGAATTCACAGTAAAGGGAAACCCTGCCAGTGTGATGAGTACGGAAAAGTCTT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CAGAGGTTGGAACTTGGGAAAAATCAGTGAGTGAATTCATATTAGAGAGGCTCTTATAAATGAGAGGATTGTGG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AAACTTGTATAGACAGAGATCAGACCTCAACAAGGGAGCCTCCACAGTATTGAAAAGTTAATATAATTAATGTA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGTGGGCAAGTTGTATGGGGAATGGGTAGTCTAAATTGCTCATTTTAGCCAGTAAAAACATTAAATTAGTTTCT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TAGATCAAGAAAAGGAAATGTTAGAAGTTATTTTTCCCTTCCAGAGGGGTCTATATGTGTAAGCAACCAGGACT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TTTGAAATAAGTTGCATCTCTGGATTTGTGATCTGTCTCCTGGATGATTATCTCTGTTTTGGGAGACAGGTATT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TTTTCTTCATGCCTGCTCTAGTCTCATCTCATATCTTTAATTCATTCAGCAAGTATACACAATAGTATTATCGT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CTACTGTTTGTTGTAAATATATATATATTATTTTCTTTTTGGTCTGAGTAGGCTTGTATTGGTACCCTAGGACA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TAAAAATCACATATATCATGTTTCAGTAAATGCAGTGAAAGGAACTATATTATTAAATTGCTGGGAATTTCTGT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AAATTTGAGACTACCTTTATATTCTCCAACACAAGACCGTGTAGGTGTCCCTTCAGAGAGTATATTTTTCTAGC 2368
Query 1 -------------------------------ATGGAGTCT--CATTCTGTCGCCCAGACTGGAGTGAAGTGGCA 41
||||||||| | |.|||||||||||.||||||||.|.|||||
Sbjct 2369 TTGGCTTCTTTATTTTCTTTATTTTTTTGAGATGGAGTCTTGC-TCCTGTCGCCCAGGCTGGAGTGCAATGGCA 2441
Query 42 TGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGG 114
.||||||||||||||||||||||.||||| |.||| |||||.||||||||||.|||.|.||||.||||||||||
Sbjct 2442 CGATCTCGGCTCACTGCAACCTCCGCCTC-CCAGGTTCAAGTGATTCTCCTGTCTCAGTCTCCCGAGTAGCTGG 2514
Query 115 GATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTG 188
||||||||||||..||.|||||.|||.||||| |||||||||||||||||||||.|||||||||||||||||
Sbjct 2515 GATTACAGGCACTTGCCACCATTCCCAGCTAA---TTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTG 2585
Query 189 GCCAGGCTGGTCTCGAACTCCTGACCTCAAG------------------------------------------- 219
|||||||||||||||||||||||||||...|
Sbjct 2586 GCCAGGCTGGTCTCGAACTCCTGACCTTGTGATCTGCCCACCTTGGCCTCCCAAAGTTCAGGGATTACAGGCAT 2659
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2660 GAGCCACCATGCCCGGCTGTTTTTTTAAGATAGAAAAATATACTTCATGTATAGCCTATTGACAGATAATGACT 2733
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2734 GATATTTTTTCTTATAGATAACACATAATAAACATTGTGAAGACTAATAAGTAACTTGCTTATTCTTTTCAGTT 2807
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2808 CTAAAACCTGTAGGAAAGAATCTTTAGAAGCTGTCAACAAGTTGATAATGTAGCCCAATCTCTACCCATGATAG 2881
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2882 GAGAGTAAGGCTTATATATTTTATAGTAGGGCACTAAATACAGGAACCATGTATTTAAAAACTTTTTAGTGATT 2955
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2956 ATCTCAGAATTCTAGGTGTCCCTCTGCTGTACATCCCTAAATTTTTTGCATAGGTATTATTAATAAATTCATTA 3029
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3030 TTTTCAAAGATGGACTGTGTTCTGTAAAAAGCTTTTCCAGTATCTGCAAATCACACAGTTTTTTTTAACTCTAT 3103
Query 220 ------------------------------------------------------------------------- 219
Sbjct 3104 TACTATTATATAAAATGATTTCTTAATATTGAACCAACCTTGCATTCCTAGAATAAACCTCACTTAGCCATGA 3176
