Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12783
Subject:
NR_136512.2
Aligned Length:
4540
Identities:
193
Gaps:
4326

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACTTTTGATGGGTTCCGGGTCCCAAAAGGGTTCGAGGCCTCTTGCCTTCGCTCCGTAGGAGGGAGTTCTCTTCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGCCCTGGGGGCCGCAGGACTGTCCAGGAATACAGTTTCCAGGTGAGATCTTACTTGAAACACCGGTAGTTCTA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCACAGCTAAAATGGCATCTACTTGGGCTATCCAGGCCCACATGGACCAGGATGAACCTTTGGAAGTAAAGATA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GAGGAAGAGAAATATACCACCAGACAGGATTGGGACCTGCGTAAAAACAACACCCATAGCAGAGAGGTCTTCCG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TCAGTACTTCAGACAGTTCTGCTACCAGGAGACATCTGGTCCCCGTGAGGCTTTGAGCCGACTCCGAGAACTTT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GCCATCAGTGGCTGAGGCCAGAGACCCACACCAAAGAACAGATTCTGGAGCTGCTGGTGCTGGAGCAGTTCCTG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ACCATCCTACCTGAGGAGCTCCAGGCCTGGGTGCAGGAGCAGCATCCAGAGAGTGGGGAGGAGGTGGTGACTGT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GCTGGAGGATTTAGAGAGAGAACTGGATGAACCAGGAGAGCAGAGTGAGTCTGTCAGCTACATCTCATTTTCCT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CAGGTCTCAGTCCACACTGGGGAACAGGAAATGTTCTTGCAGGAGACGGTACGTCTACGAAAAGAAGGAGAACC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CAGTATGTCCCTCCAGTCCATGAAAGCCCAGCCAAAGTATGAATCTCCAGAACTTGAATCCCAACAGGAGCAAG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TTTTAGATGTTGAGACTGGAAATGAGTATGGGAATTTAAAGCAAGAAGTTTCTGAAGAAATGGAACCACATGGG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AAGACATCCAGTAAATTTGAAAATGATATGTCCAAGTCTGCTAGGTGTGGAGAAACTCGTGAACCTGAAGAAAT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AACAGAAGAGCCCTCTGCTTGCTCCAGAGAAGATAAACAACCTACCTGTGATGAAAATGGAGTAAGCCTGACTG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGAACTCTGACCATACTGAACATCAGAGAATCTGTCCAGGAGAAGAATCTTACGGATGTGATGACTGTGGAAAA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GCTTTTAGTCAGCACTCACACCTCATAGAACATCAGAGGATCCATACTGGAGATAGACCCTACAAATGCGAAGA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  ATGTGGAAAAGCTTTCCGTGGGAGAACTGTGCTTATTCGACACAAAATAATACACACTGGAGAGAAACCGTATA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  AGTGTAATGAATGTGGCAAAGCCTTTGGCCGGTGGTCAGCTCTTAACCAACATCAGAGACTTCACACAGGAGAA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AAACACTATCACTGTAATGACTGTGGCAAAGCCTTTAGTCAGAAAGCAGGCCTCTTTCACCATATCAAGATCCA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CACAAGAGACAAACCTTATCAGTGCACTCAGTGTAATAAAAGTTTTAGTCGGCGTTCCATACTTACTCAGCATC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AAGGAGTTCATACCGGCGCCAAGCCGTATGAGTGCAACGAGTGTGGAAAAGCCTTTGTTTATAACTCATCCCTT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GTTTCCCATCAGGAAATCCACCACAAAGAAAAATGCTATCAGTGTAAGGAATGTGGGAAATCCTTCAGTCAGAG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TGGCCTTATTCAGCATCAGAGAATTCACACTGGGGAAAAACCCTACAAATGTGACGTATGTGAAAAAGCCTTTA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TTCAAAGGACAAGTCTTACAGAACATCAGCGAATTCACACTGGAGAAAGACCCTATAAATGTGATAAGTGTGGG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  AAGGCGTTTACTCAAAGATCAGTCCTCACGGAACATCAGAGAATCCACACTGGAGAGAGGCCCTACAAGTGTGA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TGAGTGTGGGAATGCCTTCCGAGGAATCACCAGCCTCATTCAGCATCAGAGAATCCACACTGGGGAGAAGCCCT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  ACCAATGTGATGAGTGTGGAAAAGCCTTCAGACAGAGGTCAGATCTTAGTAAACACCAGAGAATCCATAATAGA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CGTGGTACCTATGTATGTAAAGAGTGTGGGAAATCATTCAGGCAGAACTCAGCTCTTACTCAACATCAGACTAT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CCACAAAGGAGAAAAATCTGTTTCTGTGTGATGACTACAGGGAAGTTATCTCACAGAGTTCAGGCCGGAAGAAG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  ACCAGCTACAAGGAAATACTTCTGAAAAATCACTCTGAACCCCAAGCTGGAGTGAATCTTCTCCTGAGCTCTCT  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  CATTCCAGAATGGCAATCTTGTTTCAGGAGAGATCTCTAATAGTGACTGATGGTAAAGGAAGAAGGCTGTGCCT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  AGAACAAAGAATCAGGCTGGCAAAGAAATCACAGGTCTTTCCTCAAACTTTAAATTGCTACTCTCTGGAGATAG  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  CTACCTGGACTTTACAGAGCTGTCAGAAGACTTGGGAAGGTTTGCCAGCATTGGAAAAAGCCACTTGGACTTCA  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  CAGAGCTGTCAGAAGACTTAGGAAGCTTTGCCAGTAGTTCCTGAGACCAGAAATACATATTATGAAGCAGGTGC  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  TGGAACAGGCCCTGGCCCCTACTTGTGAAGCTGCAGATATAGATGGTGTTACTGAGAAGGAAACTAAGGACTTG  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  GCTCCAAAACAAAACAAAACAAAATCTGGAGATGCTGAATTTTGTTGGGGGGAATGTCTGTAGAACTGCAACAT  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  CAATGCAGTAAGTGTAGTAAAAGCTTTAGTTTATGGTGAGTCATTACTCAGCATCATGGAGTCCACGATGAAGA  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  GAATCTCTTTTCAATCTGTGCAATCAACAAGTTTTTGAAAGGCTTTTGTTTATAGTGGAACCCTCTTTTCCCCC  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  TAGAAGAACCACCACAAGGAAAAATGCTGTCACCATAAGGAATGTGGGAAAGTTTTCAGCCACATGGCCTTATT  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  TGACTTCAAAGAATCCACATGAGAGAGAGACTGCATAAATGTAATAACTGAGGAGGCCTTTGTTCAGCAAAGAA  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  ACCTTATACAAACTCGTATAAAGAATGTAGGAAGACCTTCACCCAGAAGCCAGGACTGACTGTGCACCAGAGAA  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  TCTGCACAATAAACATGATGAATGTGGAGATGCTTGCTTCAGCATTGGAGAATTCACAGTAAAGGGAAACCCTG  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  CCAGTGTGATGAGTACGGAAAAGTCTTCAGAGGTTGGAACTTGGGAAAAATCAGTGAGTGAATTCATATTAGAG  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  AGGCTCTTATAAATGAGAGGATTGTGGAAACTTGTATAGACAGAGATCAGACCTCAACAAGGGAGCCTCCACAG  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  TATTGAAAAGTTAATATAATTAATGTAAGTGGGCAAGTTGTATGGGGAATGGGTAGTCTAAATTGCTCATTTTA  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  GCCAGTAAAAACATTAAATTAGTTTCTTAGATCAAGAAAAGGAAATGTTAGAAGTTATTTTTCCCTTCCAGAGG  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  GGTCTATATGTGTAAGCAACCAGGACTTTTGAAATAAGTTGCATCTCTGGATTTGTGATCTGTCTCCTGGATGA  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  TTATCTCTGTTTTGGGAGACAGGTATTTTTTCTTCATGCCTGCTCTAGTCTCATCTCATATCTTTAATTCATTC  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  AGCAAGTATACACAATAGTATTATCGTCTACTGTTTGTTGTAAATATATATATATTATTTTCTTTTTGGTCTGA  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  GTAGGCTTGTATTGGTACCCTAGGACATAAAAATCACATATATCATGTTTCAGTAAATGCAGTGAAAGGAACTA  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  TATTATTAAATTGCTGGGAATTTCTGTAAATTTGAGACTACCTTTATATTCTCCAACACAAGACCGTGTAGGTG  3700

Query    1  ----------------------------------------------------------ATGGAGTCT--CATTC  14
                                                                      |||||||||  | |.|
Sbjct 3701  TCCCTTCAGAGAGTATATTTTTCTAGCTTGGCTTCTTTATTTTCTTTATTTTTTTGAGATGGAGTCTTGC-TCC  3773

Query   15  TGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTC  87
            ||||||||||.||||||||.|.|||||.||||||||||||||||||||||.||||| |.||| |||||.|||||
Sbjct 3774  TGTCGCCCAGGCTGGAGTGCAATGGCACGATCTCGGCTCACTGCAACCTCCGCCTC-CCAGGTTCAAGTGATTC  3846

Query   88  TCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTT  161
            |||||.|||.|.||||.||||||||||||||||||||||..||.|||||.|||.|||||   ||||||||||||
Sbjct 3847  TCCTGTCTCAGTCTCCCGAGTAGCTGGGATTACAGGCACTTGCCACCATTCCCAGCTAA---TTTTTGTATTTT  3917

Query  162  TAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG----------------  219
            |||||||||.||||||||||||||||||||||||||||||||||||||||||||...|                
Sbjct 3918  TAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTTGTGATCTGCCCACCTTGGC  3991

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3992  CTCCCAAAGTTCAGGGATTACAGGCATGAGCCACCATGCCCGGCTGTTTTTTTAAGATAGAAAAATATACTTCA  4065

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4066  TGTATAGCCTATTGACAGATAATGACTGATATTTTTTCTTATAGATAACACATAATAAACATTGTGAAGACTAA  4139

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4140  TAAGTAACTTGCTTATTCTTTTCAGTTCTAAAACCTGTAGGAAAGAATCTTTAGAAGCTGTCAACAAGTTGATA  4213

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4214  ATGTAGCCCAATCTCTACCCATGATAGGAGAGTAAGGCTTATATATTTTATAGTAGGGCACTAAATACAGGAAC  4287

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4288  CATGTATTTAAAAACTTTTTAGTGATTATCTCAGAATTCTAGGTGTCCCTCTGCTGTACATCCCTAAATTTTTT  4361

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4362  GCATAGGTATTATTAATAAATTCATTATTTTCAAAGATGGACTGTGTTCTGTAAAAAGCTTTTCCAGTATCTGC  4435

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4436  AAATCACACAGTTTTTTTTAACTCTATTACTATTATATAAAATGATTTCTTAATATTGAACCAACCTTGCATTC  4509

Query  220  --------------------------  219
                                      
Sbjct 4510  CTAGAATAAACCTCACTTAGCCATGA  4535

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