Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NR_138024.2
- Aligned Length:
- 6170
- Identities:
- 192
- Gaps:
- 5956
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGCGGGTCCTGAGTCGCGACCCTGGTCCGGACCTGACCTGAATTGCGACCCCAACCTGGACTGCTCCCCTGAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGCAACCCCTACCCCCGCCCACCAGTATGGCCCGGCACGTGTTCCTAACGGGGCCCCCAGGTTAGAGCCTCCAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGGAAAACGTGAATGCCGAGTTGGGCAGTATGTGGTCGACCTGACTTCTTTTGAGCAGTTGGCACTACCCGTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTGAGGAATGTGAGCCGACTGCAGCAGTGGCCCAGGGCAAAGAGTGTGCGTCATCGATGAGATTGGGAAGATGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGCTCTTCAGTCAGCTTTTCATTCAAGCTGTTCGTCAGACGCTGTCTACCCCAGGGACTATAATCCTTGGCACA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATCCCAGTTCCTAAAGGAAAGCCACTGGCTCTTGTAGAAGAAATCAGAAACAGAAAGGATGTGAAGGTGTTTAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGTCACCAAGGAAAACAGAAACCACCTTCTGCCAGATATCGTGACGTGCGTGCAGAGCAGCAGGAAGTGAAGAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACGTGCATTCCTGCCTTCCGTGAAGGAGTGCCCAGTTCAAGAGGAGCCTGATGGAGCCCTGCCTGTCGAGGCTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TATGCCTATGGGGTTATGGAACCTTGTGGGCTTTTCTAGAGAAAACTCAACAGCTGTTTCCCATAAAATGTTTA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAAGATCAAATTAGCCTTAATGCTGGATTGTCTGTACAAGATTAACTATCCATTGTGGCTTATCTATGCTTAAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GATTTCTTGTTTATTTCCTCTTGCAGTCATGCACATGATTTGGGTAAACTGTGAGATGAGAAATGGTTTTCAGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTATTAGATGGAATTCACCCCCGTTGAAGTTTATAAATGTGTTCAGGGGAAGCGGGAGGAAAGAGTTCACTGCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TAATCAGTTTTGCATGTCATGAAAATTAAATTCCTCTCCAGGTGCAGCTTCAGCCTCATGCAACTTAAAGTGAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AACAGTTATTTGATTTTTTAAAAAATATTATTCCAAAAGAAAACCATTTTAGGTCATCTCCCCCAACTCTGTTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCTTACTGCTTAATAAATATAAAAATAAATCTGATGGTTACAGACAGGAGGCATTGTGTGGGAGGAATACACAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCTTTGGAAGTGTTGATAGCATCTGATATTCAGCCGACCAGATGACAAGAGCTCAGGCCCACGGGTTTGCATAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GAGCACTGCTTTGCCTTAGTTTACTCGGGAGCAATTTTGAATCTTTCTATGCCTAGTTTCCCTTCCAGAAAAGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGGAAGTGGCTGTCATCTCAGGAGTGATGTCACACCACAGAAGGAAACTGTCAACCACTCCACACAACTGTGGA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAGTGCCCAGTGCCAGGGGCTGGGCTTATCAGGAATAATGGTGTAGCAATGCGGAGTTCAGCCCATAACAGGGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TACTATAAAAATGAAGTAGGAAAGTAGAAGAGACCCCTGAAACCCCAGAACTGATAGAGGATAAAAACTTCCCT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCAAGTGGTAGATGGTACTGGAGTGATAAACAGTTCAGTGTTTTTAGGTCATTTTTGGTGAAGATCTATGAATT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TCCAGGATTTTTTTTTAACAAATTAGCATTGGCTACAAACCCACTGGTATAAGCAGCAGTGTGCCTTCTCTCTA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ACTGTGGACAAGTCGGGCATGTGGCGGGTGAGGAGCCCTGGGCTGGGCACTGGGGCACAGTGAATGGGGCGGGA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGGGCTCACATCAAAACCAAAATGGCACGCAGCCCAGGTCTGGTTCCTCCATCAGTGTCTCTTTCCTCAGCGCT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TTTCTTCCGAGGTAACTTTGTGAAGCTTGACTTGGACTTGCCTAGCCTTGGAGGGACCACAACAGGGAGGCCTA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ATAGATTATGAACTAAGCCCTCAAAAGGGCTACCTGCCCAGGAGGAGGAAGTGGGCATCTCCTTCCACAGTCCC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TGCCTGGCGGGGCTGTTCAGGGAGACTGAGTTCCGAGCTCAGGATGTCTGGCAGGCTGGCTGTGACTTCCAGCC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ACCATCACCAGGACACCGGTGTGGGCTGCATGCCTCAGTGGGCCAGGAGAGGCACGGCCTCTGAGTTGGGTAGA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GGCTTCCCACAAAGGCCTGGGAACCTGATCCTGGCCGTAAATCTGAAAGTACCACAGCCCTCAGGAGAACCAAG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AGATAGGGAGGCAGGCTGGGGAAATGTCATCAATGTGCACCCAGGCGTGGTGGAGCTGGTCAGCCCCAGCTGGA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GTGGGACCCCATCAAGATGGAGCCTTTCCTGGCACCTCCGGGAGGCCGTTTTGCGTTTCCGCCCTTCATGCATC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TGAAACACCAAGGGCCATGTTCCTTCTGGTGCTTGTCCTTTTGAGCTTGGTGTTTCAGCCGTGTCTGTTTTGTA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GACTTTGATTTTGTCTTAAATGAGAAAGAAAGCTGGTGAAGGTTATTTCAAAGTTAAATAGCTAGTCTGAGGGG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CTTATCACTGAAGCCAGTTGTGCTTATGTGGGGTGGGAGTGTCACTGCCTACTTGAAAGTATGCACTTGTGTGG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AACAGATTCAGGGTGGCCCCTAGCACTTGGGGCTGCGGGAGCTTCTGCACACTTTCCCTTTAACGGTAAAGAGA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CAAGCTTGGAGTGTTTAAGTGGTTCGTTCAGGAGCACAGTGATAGCGGTGACAAAGGAGATTTGAACCCACGTC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TGCGTGGCTCCAAAGTTCACTCTTTCATCACTCCCTGCTGCGTCCTTCTTGAGGCTTTAGCATTTTTAGTGTGT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TTTGTGCCCCCAGACCTCAGAGTTGACATTTAGCAGTGATAAACTGCTGTAAATCCAAAGAACGTTTAGTGTCT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CTTGTGGTGAGGTCCTGAAATGATTGTTGTATTAGTCAAACAGAATGATCATGGAGCATGTATGGAGATGTCAG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 ATGCAATCCCTGTATTGTAAGGCAATGACATTTAATGAAGGATAAGATGAATTCACAGATAACTAGAACTCAGG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GCCAAACGCACACAGCCTGTAGCAACAGTGTCATGCTGAGATTTAAAGGAAGAAGAGGTGCCGTGGCAGAACTC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CACGTGACCGTCCCCTCCCTGCACGCAGCCAGGATGAGAGGAGCAGAGCTGAGCGCCACCTCCCTGTCGGTGCC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 ACGGCTGAGGTGAGGAGCTCTTGCCGGATGGTGGGGTGGGGGCAGCAGGGCAGATTGAAGTCAGGGATTCTCTT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 ATACCTGAGTTTGGAATGCCTCCTATTCAAACAAAGCAAAATATCTAACAGATGGTTGGATATGAGTCTCAGGG 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 AGGAATTCAATTTGAAAAGCACAGAATTAACATGTATTGCTTATATGAAGAATCTCAGCTAGAATAACAAGGTC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GGATGGGAGGAATCAGGACTGATTTGAAGCACGATTTACTAAATCATTCTTTCCTTTTCCTCCTTAGCAGATCA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TACCGCCAGCTGCTTAACACGTAATAGTTTAATAAATTGTTTCTTCTTACCTCTCAGTGAGGGTAAGCACATGC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 AGGGAGATGGGTGAGTCTTTTAAATGGATAGTGTCATCTCTGATGATCAGCCTTGACAGGGAGAGATCCTAGTA 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 AAGCTGCAAATTCAGGCACTCAGTTCCCAGCCCTCCAGTTATCAAGGGGGTGGGAACGCTGGTGGGCTGGAAAA 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 TGTGGAACAGACCTGCTCCTCTTCTTTTCCTGCCAATTACCGTATTCATAGAAGGTTGTGTCTGTGGATCACAC 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 CTGTGTGTGTGCTGATGGCGGATGCTTGTGTAGCATAGTGACTTGGGACAAAACAGCATGGTAGATGAGGCTGG 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 AGACGGGTGGGCTAAGTAAACAGGCATTGCATTGCACATTTTGTGGGCAAAGAAGTTGAAGCATCGCATGATTT 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 TAACAAATTACTTGCCAGATGATTTCAACACACTGCAAAATTTAGAATCAATAATGCCAAATTGGCCACATGAT 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 TTATATAAAACCAAGTGCTATGGTTTTAATATTATCTTTAGAGGAGAAACCATTTTGATCTGTGTCCAAATAAC 3996
Query 1 -------------------------ATGGAGTCTCATTCTGTCGCCCAGA-CTGGAGTGAAGTGGCATG--ATC 46
|..||||||||.||||||| |..|| ||||||||.||||| || |||
Sbjct 3997 TCTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCACTCTGTCG-CTTGAGCTGGAGTGCAGTGG--TGCTATC 4067
Query 47 TCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTAC 120
|||||||||||.||||||.|||||..|.|.||||||||||||||||||||..|||||.||||||||||||||||
Sbjct 4068 TCGGCTCACTGTAACCTCCGCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAACCTCCTGAGTAGCTGGGATTAC 4141
Query 121 AGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGG 194
||||||.|||.||||.||||.||||| ||||||||||||||||||||||.|||||||||||||||||||||.|
Sbjct 4142 AGGCACCCGCCACCACGCCCAGCTAA--TTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAAG 4213
Query 195 CTGGTCTCGAACTCCTGACCTCAAG------------------------------------------------- 219
|||||||||||||||||||||||.|
Sbjct 4214 CTGGTCTCGAACTCCTGACCTCATGATTTGCCTGCCTCAGCCTACAAAAGTGCTGGGATTACAGGCGTGAGCCA 4287
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4288 CCGTGCCCAGCCCCCAAATAACTCTTGAACTGGAAAATAACTCTTTAGCTATATACTGGCAGAATATTTGAACA 4361
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4362 ACTCTAGCAAGAAATGTCAGTTTAGGGATGCCTCCTCTAAATGGGGGCTTAGAATATAACATTTTGCAGGAAGT 4435
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4436 CCTTTCTGATACATAGCTGACTAGATGAAGGACCAGATTAACAAGTTCATGAGTTGTAAATATAAAAGTTGTGT 4509
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4510 ACCACGATAAAAAAGAAAAAGAAGTATGGCTGCACTGTTGATGGCTGGTCAAACAGCCCCCAAGAATCCTGGGG 4583
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4584 TGACTCCAATACTGCCACCTTTTCTCTGTGGGTGCAGTTGCCTGCGGATGTGTGTGCACATCTGTGCCTCGGTA 4657
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4658 TGCACACTCGAGATGCCCGCTCTCATAGACGGTGCAGAGCGTCACTGCATTCCTATCTGATTAATGTGACCTTA 4731
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4732 GTGTTGTAGATACACTGTGTCACTTTCATCCTCCCTCCTCCCCACAAAAGATGCCACGAGAACTCGTGAACTGT 4805
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4806 GATAAGCAATGAACAGAATAACTGTTGAAGAAGCACCTCATGAACCTCCCCAGAGAAACGGGATGGAGGAGCAC 4879
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4880 CCAGGGTGCTCTTGCTCTCTTGCCTGCGCTGCCATTTCCTTCCAGCCTGGGTTTCTAGCTCTTTGGGGAGATTC 4953
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4954 CCCGTTTTGTGGAATGCTTTCTGTGTTTCCTACTTCTGGATGCCTAAGGAGTGGCCAGTCATACTCCTGGCTGA 5027
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5028 CCACTGCCAGGCACCGTGGTTTTCCTCACTGAACTCAAGGAGTCACCCTCCGTGGGGAGGCCACACTCACAGCT 5101
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5102 CCAGGCCTGCCATTTAGCCCTTGGGGCTTGGCTGTAAAGTTGCCCAAGAGGATTACAGGAGCTGCCAGCCAAGT 5175
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5176 TTAATTTGGCCACCTTAGAGAACTGCAGCAAGGCCCTATCAGCTTCCCATTAGACAAACAACTGCATTTAAATT 5249
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5250 AAATAAAGTTTGCACCTCTAGGGAGTGCTGACCTGAAAATAAGAACCTTCTGTCTGTGATTATAGAGTACACTT 5323
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5324 GCTTTTATTAATTGCTGATTCTTAGTTTACAAAAAAAAAAATTAGAAAAGCATTACCATTTACTTTCCAAGGGG 5397
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5398 CAAGAGATTCTCTACAATACCCTTCCCCCAACCCTCTCCTCAAATTTCCAAATCCTAAATACTTTGAAGAAATT 5471
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5472 TGTGTGACTGTTTAAAATTGAGTATTTCCTTCTAACTATTGTCTTTTGAAAAGGGATGGTTCACCAGGCCAGTG 5545
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5546 ATACTCTATGGACTGCATTTTGGGACCTCTACCCCAGCAAGGATACAGGTTCCTGGGGTCTTGAAGATGGGAAA 5619
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5620 AGTTGTCTCAGAATTTACCCAAATGTCGTTCTCACCATAAAAGATATACTTGTAGAAATGAGAAGCTTCAGTAT 5693
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5694 AACTCAAAACACTGGACGCAGCAATAACTATAAACATTTTAATTTCAAAAACAAAGGTGTGTGCGATGTTGTGT 5767
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5768 GCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTGTGAAGCCCGCAGGGTGCTGGCGGCCCACC 5841
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5842 AATCGCCTGGACTACAGTGAGGAGCATTGTGTGACTCCGCGGTGGATTTCCATGCACCGAATGGACTCAGTTTC 5915
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5916 TAAACTCACATCCTAACGTATCCTGGCTTTTCACAGAATACTGGAGACATGACTGCATGCATGATCACGGTTCT 5989
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5990 TGTTGTGAAGCTGCCACCATGTTACGCTTAACAGCTGCATAAATATTATAAAGAAATAGGGTTTTCTTGACACT 6063
Query 220 -------------------------------------------------------------------------- 219
Sbjct 6064 TAGATTTAACCTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCTGTTCATTTCTTTTTCATGGTAAC 6137
Query 220 ---------------------------- 219
Sbjct 6138 AGTAATGTATAAAGTGCCGATGATGTAA 6165
