Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NR_138025.2
- Aligned Length:
- 6069
- Identities:
- 192
- Gaps:
- 5855
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGCGGGTCCTGAGTCGCGACCCTGGTCCGGACCTGACCTGAATTGCGACCCCAACCTGGACTGCTCCCCTGAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGCAACCCCTACCCCCGCCCACCAGTATGGCCCGGCACGTGTTCCTAACGGGGCCCCCAGGCCGACTGCAGCAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGCCCAGGGCAAAGAGTGTGCGTCATCGATGAGATTGGGAAGATGGAGCTCTTCAGTCAGCTTTTCATTCAAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTGTTCGTCAGACGCTGTCTACCCCAGGGACTATAATCCTTGGCACAATCCCAGTTCCTAAAGGAAAGCCACTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCTCTTGTAGAAGAAATCAGAAACAGAAAGGATGTGAAGGTGTTTAATGTCACCAAGGAAAACAGAAACCACCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCTGCCAGATATCGTGACGTGCGTGCAGAGCAGCAGGAAGTGAAGACACGTGCATTCCTGCCTTCCGTGAAGGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTGCCCAGTTCAAGAGGAGCCTGATGGAGCCCTGCCTGTCGAGGCTGTATGCCTATGGGGTTATGGAACCTTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGGCTTTTCTAGAGAAAACTCAACAGCTGTTTCCCATAAAATGTTTAAAAGATCAAATTAGCCTTAATGCTGGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTGTCTGTACAAGATTAACTATCCATTGTGGCTTATCTATGCTTAAAGATTTCTTGTTTATTTCCTCTTGCAGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CATGCACATGATTTGGGTAAACTGTGAGATGAGAAATGGTTTTCAGAGTATTAGATGGAATTCACCCCCGTTGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGTTTATAAATGTGTTCAGGGGAAGCGGGAGGAAAGAGTTCACTGCCTAATCAGTTTTGCATGTCATGAAAATT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAATTCCTCTCCAGGTGCAGCTTCAGCCTCATGCAACTTAAAGTGATAACAGTTATTTGATTTTTTAAAAAATA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTATTCCAAAAGAAAACCATTTTAGGTCATCTCCCCCAACTCTGTTTGCTTACTGCTTAATAAATATAAAAATA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AATCTGATGGTTACAGACAGGAGGCATTGTGTGGGAGGAATACACAACCTTTGGAAGTGTTGATAGCATCTGAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATTCAGCCGACCAGATGACAAGAGCTCAGGCCCACGGGTTTGCATAAGAGCACTGCTTTGCCTTAGTTTACTCG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGAGCAATTTTGAATCTTTCTATGCCTAGTTTCCCTTCCAGAAAAGCAGGAAGTGGCTGTCATCTCAGGAGTGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGTCACACCACAGAAGGAAACTGTCAACCACTCCACACAACTGTGGAGAGTGCCCAGTGCCAGGGGCTGGGCTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATCAGGAATAATGGTGTAGCAATGCGGAGTTCAGCCCATAACAGGGGTACTATAAAAATGAAGTAGGAAAGTAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AAGAGACCCCTGAAACCCCAGAACTGATAGAGGATAAAAACTTCCCTCCAAGTGGTAGATGGTACTGGAGTGAT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AAACAGTTCAGTGTTTTTAGGTCATTTTTGGTGAAGATCTATGAATTTCCAGGATTTTTTTTTAACAAATTAGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATTGGCTACAAACCCACTGGTATAAGCAGCAGTGTGCCTTCTCTCTAACTGTGGACAAGTCGGGCATGTGGCGG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GTGAGGAGCCCTGGGCTGGGCACTGGGGCACAGTGAATGGGGCGGGAGGGGCTCACATCAAAACCAAAATGGCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CGCAGCCCAGGTCTGGTTCCTCCATCAGTGTCTCTTTCCTCAGCGCTTTTCTTCCGAGGTAACTTTGTGAAGCT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGACTTGGACTTGCCTAGCCTTGGAGGGACCACAACAGGGAGGCCTAATAGATTATGAACTAAGCCCTCAAAAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GGCTACCTGCCCAGGAGGAGGAAGTGGGCATCTCCTTCCACAGTCCCTGCCTGGCGGGGCTGTTCAGGGAGACT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GAGTTCCGAGCTCAGGATGTCTGGCAGGCTGGCTGTGACTTCCAGCCACCATCACCAGGACACCGGTGTGGGCT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GCATGCCTCAGTGGGCCAGGAGAGGCACGGCCTCTGAGTTGGGTAGAGGCTTCCCACAAAGGCCTGGGAACCTG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATCCTGGCCGTAAATCTGAAAGTACCACAGCCCTCAGGAGAACCAAGAGATAGGGAGGCAGGCTGGGGAAATGT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CATCAATGTGCACCCAGGCGTGGTGGAGCTGGTCAGCCCCAGCTGGAGTGGGACCCCATCAAGATGGAGCCTTT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CCTGGCACCTCCGGGAGGCCGTTTTGCGTTTCCGCCCTTCATGCATCTGAAACACCAAGGGCCATGTTCCTTCT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GGTGCTTGTCCTTTTGAGCTTGGTGTTTCAGCCGTGTCTGTTTTGTAGACTTTGATTTTGTCTTAAATGAGAAA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GAAAGCTGGTGAAGGTTATTTCAAAGTTAAATAGCTAGTCTGAGGGGCTTATCACTGAAGCCAGTTGTGCTTAT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GTGGGGTGGGAGTGTCACTGCCTACTTGAAAGTATGCACTTGTGTGGAACAGATTCAGGGTGGCCCCTAGCACT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TGGGGCTGCGGGAGCTTCTGCACACTTTCCCTTTAACGGTAAAGAGACAAGCTTGGAGTGTTTAAGTGGTTCGT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TCAGGAGCACAGTGATAGCGGTGACAAAGGAGATTTGAACCCACGTCTGCGTGGCTCCAAAGTTCACTCTTTCA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TCACTCCCTGCTGCGTCCTTCTTGAGGCTTTAGCATTTTTAGTGTGTTTTGTGCCCCCAGACCTCAGAGTTGAC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 ATTTAGCAGTGATAAACTGCTGTAAATCCAAAGAACGTTTAGTGTCTCTTGTGGTGAGGTCCTGAAATGATTGT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TGTATTAGTCAAACAGAATGATCATGGAGCATGTATGGAGATGTCAGATGCAATCCCTGTATTGTAAGGCAATG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ACATTTAATGAAGGATAAGATGAATTCACAGATAACTAGAACTCAGGGCCAAACGCACACAGCCTGTAGCAACA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GTGTCATGCTGAGATTTAAAGGAAGAAGAGGTGCCGTGGCAGAACTCCACGTGACCGTCCCCTCCCTGCACGCA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GCCAGGATGAGAGGAGCAGAGCTGAGCGCCACCTCCCTGTCGGTGCCACGGCTGAGGTGAGGAGCTCTTGCCGG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 ATGGTGGGGTGGGGGCAGCAGGGCAGATTGAAGTCAGGGATTCTCTTATACCTGAGTTTGGAATGCCTCCTATT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CAAACAAAGCAAAATATCTAACAGATGGTTGGATATGAGTCTCAGGGAGGAATTCAATTTGAAAAGCACAGAAT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TAACATGTATTGCTTATATGAAGAATCTCAGCTAGAATAACAAGGTCGGATGGGAGGAATCAGGACTGATTTGA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 AGCACGATTTACTAAATCATTCTTTCCTTTTCCTCCTTAGCAGATCATACCGCCAGCTGCTTAACACGTAATAG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TTTAATAAATTGTTTCTTCTTACCTCTCAGTGAGGGTAAGCACATGCAGGGAGATGGGTGAGTCTTTTAAATGG 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 ATAGTGTCATCTCTGATGATCAGCCTTGACAGGGAGAGATCCTAGTAAAGCTGCAAATTCAGGCACTCAGTTCC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CAGCCCTCCAGTTATCAAGGGGGTGGGAACGCTGGTGGGCTGGAAAATGTGGAACAGACCTGCTCCTCTTCTTT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 TCCTGCCAATTACCGTATTCATAGAAGGTTGTGTCTGTGGATCACACCTGTGTGTGTGCTGATGGCGGATGCTT 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 GTGTAGCATAGTGACTTGGGACAAAACAGCATGGTAGATGAGGCTGGAGACGGGTGGGCTAAGTAAACAGGCAT 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 TGCATTGCACATTTTGTGGGCAAAGAAGTTGAAGCATCGCATGATTTTAACAAATTACTTGCCAGATGATTTCA 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 ACACACTGCAAAATTTAGAATCAATAATGCCAAATTGGCCACATGATTTATATAAAACCAAGTGCTATGGTTTT 3848
Query 1 ------------------------------------------------------------------------AT 2
|.
Sbjct 3849 AATATTATCTTTAGAGGAGAAACCATTTTGATCTGTGTCCAAATAACTCTTTTTTTTTTTTTTTTTTTTGAGAC 3922
Query 3 GGAGTCTCATTCTGTCGCCCAGA-CTGGAGTGAAGTGGCATG--ATCTCGGCTCACTGCAACCTCTGCCTCTCG 73
.||||||||.||||||| |..|| ||||||||.||||| || ||||||||||||||.||||||.|||||..|
Sbjct 3923 AGAGTCTCACTCTGTCG-CTTGAGCTGGAGTGCAGTGG--TGCTATCTCGGCTCACTGTAACCTCCGCCTCCTG 3993
Query 74 AGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAAT 147
.|.||||||||||||||||||||..|||||.||||||||||||||||||||||.|||.||||.||||.|||||
Sbjct 3994 GGTTCAAGCGATTCTCCTGCCTCAACCTCCTGAGTAGCTGGGATTACAGGCACCCGCCACCACGCCCAGCTAA- 4066
Query 148 TTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-- 219
||||||||||||||||||||||.|||||||||||||||||||||.||||||||||||||||||||||||.|
Sbjct 4067 -TTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAAGCTGGTCTCGAACTCCTGACCTCATGAT 4139
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4140 TTGCCTGCCTCAGCCTACAAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGCCCAGCCCCCAAATAACTCTTG 4213
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4214 AACTGGAAAATAACTCTTTAGCTATATACTGGCAGAATATTTGAACAACTCTAGCAAGAAATGTCAGTTTAGGG 4287
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4288 ATGCCTCCTCTAAATGGGGGCTTAGAATATAACATTTTGCAGGAAGTCCTTTCTGATACATAGCTGACTAGATG 4361
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4362 AAGGACCAGATTAACAAGTTCATGAGTTGTAAATATAAAAGTTGTGTACCACGATAAAAAAGAAAAAGAAGTAT 4435
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4436 GGCTGCACTGTTGATGGCTGGTCAAACAGCCCCCAAGAATCCTGGGGTGACTCCAATACTGCCACCTTTTCTCT 4509
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4510 GTGGGTGCAGTTGCCTGCGGATGTGTGTGCACATCTGTGCCTCGGTATGCACACTCGAGATGCCCGCTCTCATA 4583
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4584 GACGGTGCAGAGCGTCACTGCATTCCTATCTGATTAATGTGACCTTAGTGTTGTAGATACACTGTGTCACTTTC 4657
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4658 ATCCTCCCTCCTCCCCACAAAAGATGCCACGAGAACTCGTGAACTGTGATAAGCAATGAACAGAATAACTGTTG 4731
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4732 AAGAAGCACCTCATGAACCTCCCCAGAGAAACGGGATGGAGGAGCACCCAGGGTGCTCTTGCTCTCTTGCCTGC 4805
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4806 GCTGCCATTTCCTTCCAGCCTGGGTTTCTAGCTCTTTGGGGAGATTCCCCGTTTTGTGGAATGCTTTCTGTGTT 4879
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4880 TCCTACTTCTGGATGCCTAAGGAGTGGCCAGTCATACTCCTGGCTGACCACTGCCAGGCACCGTGGTTTTCCTC 4953
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4954 ACTGAACTCAAGGAGTCACCCTCCGTGGGGAGGCCACACTCACAGCTCCAGGCCTGCCATTTAGCCCTTGGGGC 5027
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5028 TTGGCTGTAAAGTTGCCCAAGAGGATTACAGGAGCTGCCAGCCAAGTTTAATTTGGCCACCTTAGAGAACTGCA 5101
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5102 GCAAGGCCCTATCAGCTTCCCATTAGACAAACAACTGCATTTAAATTAAATAAAGTTTGCACCTCTAGGGAGTG 5175
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5176 CTGACCTGAAAATAAGAACCTTCTGTCTGTGATTATAGAGTACACTTGCTTTTATTAATTGCTGATTCTTAGTT 5249
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5250 TACAAAAAAAAAAATTAGAAAAGCATTACCATTTACTTTCCAAGGGGCAAGAGATTCTCTACAATACCCTTCCC 5323
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5324 CCAACCCTCTCCTCAAATTTCCAAATCCTAAATACTTTGAAGAAATTTGTGTGACTGTTTAAAATTGAGTATTT 5397
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5398 CCTTCTAACTATTGTCTTTTGAAAAGGGATGGTTCACCAGGCCAGTGATACTCTATGGACTGCATTTTGGGACC 5471
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5472 TCTACCCCAGCAAGGATACAGGTTCCTGGGGTCTTGAAGATGGGAAAAGTTGTCTCAGAATTTACCCAAATGTC 5545
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5546 GTTCTCACCATAAAAGATATACTTGTAGAAATGAGAAGCTTCAGTATAACTCAAAACACTGGACGCAGCAATAA 5619
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5620 CTATAAACATTTTAATTTCAAAAACAAAGGTGTGTGCGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAG 5693
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5694 AACAAGCACGCGTCCCTGTGAAGCCCGCAGGGTGCTGGCGGCCCACCAATCGCCTGGACTACAGTGAGGAGCAT 5767
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5768 TGTGTGACTCCGCGGTGGATTTCCATGCACCGAATGGACTCAGTTTCTAAACTCACATCCTAACGTATCCTGGC 5841
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5842 TTTTCACAGAATACTGGAGACATGACTGCATGCATGATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGC 5915
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5916 TTAACAGCTGCATAAATATTATAAAGAAATAGGGTTTTCTTGACACTTAGATTTAACCTTAATGCATCTGCCCA 5989
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5990 GCTGATGGTATCAGACGTGCTGCTGTTCATTTCTTTTTCATGGTAACAGTAATGTATAAAGTGCCGATGATGTA 6063
Query 220 - 219
Sbjct 6064 A 6064
