Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NR_138033.1
- Aligned Length:
- 3510
- Identities:
- 184
- Gaps:
- 3299
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TCTCCACCGCCCGGTGGCGGGTCACGTGACTGCGTCTCCCCGCCCTCTCACCCCGCTGCCTCTAGGTTCTGGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGATGGCGAAGGTCTCAGAGCTTTACGATGTCACTTGGGAAGAAATGAGAGATAAAATGAGAAAATGGAGAGAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAAAACTCAAGAAATAGTGAGCAAATTGTGGAAGTTGGAGAAGAATTAATTAATGAATATGCTTCTAAGCTGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGATGATATTTGGATCATATATGAACAGGTGATGATTGCAGCACTAGACTATGGTCGGGATGACTTGGCATTGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTTGTCTTCAAGAGCTGAGAAGACAGTTCCCTGGCAGTCACAGAGTCAAGCGATTAACAGGCATGAGATTTGAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCCATGGAAAGGCTGCAAGAAAGCGTAAGATTGCCATTCGAAAAGCCCAGGGGAAAAATGTGGAGGCCATTCGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAGCTGAATGAGTATCTGGAACAATTTGTTGGAGACCAAGAAGCCTGGCATGAACTTGCAGAACTTTACATCAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGAACATGACTATGCAAAAGCAGCCTTTTGTTTAGAGGAACTAATGATGACTAATCCACACAACCACTTATACT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTCAGCAGTATGCTGAAGTTAAGTATACCCAAGGTGGACTTGAAAACCTCGAACTTTCAAGAAAGTATTTTGCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAGGCATTGAAACTGAACAACAGAAATATGAGAGCTTTGTTTGGACTTTATATGTCGGCAAGTCATATTGCTTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TAATCCAAAAGCAAGTGCAAAAACGAAAAAGGACAACATGAAATATGCTAGTTGGGCAGCTAGTCAAATAAACA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAGCTTATCAGTTTGCAGGTCGAAGTAAGAAGGAAACCAAATATTCTCTTAAGGCTGTCGAAGACATGTTGGAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACATTGCAGATCACCCAGTCTTAAGGTTTCAAAAACTCTTTGACATTAGATTTCACAACTGCACAATTGAACTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ATTGGCCTGTAACTTATTTACTAAATGCTCAGTGCTATTTATATACTACAGTAATTTTCTGTTAAGAAGGCAGT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGTAAAGAATGTGTTTATATAAACCTAAAAATGCCTTTTACTGCTAAGTGGGGAGATGGGGGAAATCCATGGAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GAGAGATTTAAGACTTATTGATTGTACATCAGTCTCTTCATATCACATATACATGTATATATATAAAACTCTAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGTAGTATAACCTTGTTAAATAAACCATGATGATTTATTAAACTTGCATATGAAGATTCTAACTTCATTTTGTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATACTCACAGTGGATATATTGTTTAAGAACTCAGTTTCTAGTTAACTCCTTACTGGTGATAGCAAAGTCACAGC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ATATGTAGCTGACCGAAGCAGATTATTTTGACTTTGTTTATATTGTCGAATTGGATTTTGCTGTACATTCCAGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGGCTATTTGAATTGTTTTATCTGCTGTAATATCCTTCTGATGAATCTTGCTTAAAATATGTCATTCTCCAAAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTCAGCAATATTTCTTTGTAAAATTTTTGTTTTGATATAGGACATAATTGAGATTTTTACATATAAAATGCCTT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AAGATAAATATGTGTTACGACACTTTAACTTTTATGCAAGTTATATTTATTGAATCCTTTAATAGTAAATTACA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGAAAGAATATTAAAGAATCATAAAGAGTAGGGATTAAAGGGGTTGTAGTTATTTTTAATTTTGAAAAAAATAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GAAAATTAAAACTATCCTTAGAAACAAAAATGTTAAAATTTTCCTATTCTATCATTACCTTAGTTAGAATTTTT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TATTTTTCTCTTTTCATAATAAACAACCATTATGCTACCTTCAACAGTATTTGACATGTTTCAACAAAATAGAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GAGACTTGAAAGTTAAATTTCATTTAGACACAAATCAGTTTTTAAAATAGCAACTGTTCACCGCAAATATTTAT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GGTATTTGTTTATAATAAATATATTTAAATTTATTTTTACTAAAAATATACAGAGGCATCTACAGACTTGTCAT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TGCTGCTTTGGACAAGTGGGGATTGTGGAGGAATTGACAATCTAGAAGTGTTTAGAAAGAAAAGTATTGTCAAT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ATCAGCTTCTTTTAACCTTTTGAATAGTTCTGCTAATAAATTATTCTCCATATCTAGTCTAATCTTTCATATTA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CAGTCATTTTCGTTTTATTCTGCCACGAGTAATAGGCAGCTGATTAATATATTCTGTGAAAGAACTCTTCTCAT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CTGAAGGTAATTCTCTACTAATCTTTATTACCACAAAGATCCCGTCTTTGTACACATGAAATTAGTAACTGCAT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TTTCAACATGATGAACCATTTGAAATTTACATTTTCTGTAAAGAAAATAGTGCCTGCACGTTGTTTCACTACCT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TTTCCCCTTCAAACCTCCTCCCCGTCAGTCACTGGATTAGTGTTTACTCTAGCAATTATATTTGTGTAATAAGT 2442
Query 1 ---------------------------------------------------------ATGGAGTCTCATTCTGT 17
|...||||||.||||||
Sbjct 2443 AATTCAGTGCCTCTTATAGCTGTCTGCCTTAGTTTCACTTTTTTTTTTTTTTTTTTGAGACAGTCTCGTTCTGT 2516
Query 18 CGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCT 91
|.|||||.||||||||.||||.|.|||||.|.|||||||||||||| ||||.||.|.||||||||||||..|
Sbjct 2517 CACCCAGGCTGGAGTGCAGTGACGTGATCGCAGCTCACTGCAACCT---CCTCCCGGGTTCAAGCGATTCTTGT 2587
Query 92 GCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGT 165
|||||.|||| |.||||||||||||.||||||||...||.||||||||.|||||| |||||||||||||||
Sbjct 2588 GCCTCAGCCT-CTGAGTAGCTGGGACTACAGGCATGTGCCACCATGCCTGGCTAA----TTTTGTATTTTTAGT 2656
Query 166 AGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-------------------- 219
||||||||||||||||||||||||||||||||||||..||||||||.|||||||
Sbjct 2657 AGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTGAAACTCCTGGCCTCAAGTGATCTACCCGCCTCAGCCT 2730
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2731 CCCGAAATGCTGGGATTACAGGCATGAGCCACTGAGCCTGGCCAGTATCACTTTATTTTTTCAAAATTTTAATA 2804
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2805 ACTTCTTTCCAAGATTTTATATTTGTTAAGCACATTGCCAATCCTTAGTTATTTATAAACTTCAACTTAAATGT 2878
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2879 ACTGATAATCCCATTACAGCAGGCAGTTGCCTACAGCTATTACCTTTATTTCTTCTTTAGCAGTACCTTAGTTT 2952
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2953 GATCTGATAGTGGCAAGGATCCCTCTTCCTCAAAGAGATTAGGACCTTACCCCAACTCCAGAGGTTGCACCTTC 3026
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3027 ATTGATCTGAAACAGAAGTGGTAGTTTAATTCTGTATAGTCTGATTAGTACGAGGCAGAACTTTTTGCAGTGAA 3100
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3101 GGAAATCAACCATCCATTCTGTCTCTCTATTGTGGTAGCTACTAACCATATGTGATATTGAGTACTTGATATGT 3174
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3175 GACTACTGCAATTGAGAAATTGAATGAAATGAACAGAACCCTACTGAGAAGGGCTTTCCTTTCAAATTAAAAAA 3248
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3249 TCAGAGCTTTGTGTGGTAACAGTCATTGCCTCTTTCTCCTCTTTCTGGCCAACAGCATGCCTAAAGGTGCAGCT 3322
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3323 GCCATCAAACAACCATGAAACAGCAAATGTGAGAATGAAAGTTACATTTCAGAGATAGAACTGAAGGAGGATTA 3396
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3397 AGGGGATCCTGGGTCCCTGATATGGCATTGTTGAACACCCAAATCAAGATGAGCAATTGCCAAACTCCCCAATT 3470
Query 220 -------------------------------- 219
Sbjct 3471 ATTAAATGAGAAAAAATAAACTCCAGATTGTT 3502
