Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12783
Subject:
NR_138092.2
Aligned Length:
4699
Identities:
189
Gaps:
4483

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGACGACGCGCCGTGCGCCTGCGCACGGCTTGCCCATGTGTGCTGCAGCCGTCAGCCGGCCCAGCTGAGCAGCA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCAACGGACCTTGTTAACGGCGCGGCAGCCTCCACCGCCTGCTGTTGCCCTCCTCTCTCGGTGGTCTGTCCGCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CAGCGCACGTCACCATGGGCAAGAGCCGGACGAAGCGCTTCAAGCGACCTCAGTTCTCCCCTACGGGCGACTGT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CAGGCCGAGGCGGCTGCGGCGGCGAATGGGACCGGAGGCGAGGAGGACGACGGGCCGGCGGCGGAGCTGCTGGA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AAAGCTCCAGCACCCGAGCGCCGAGGTCCGCGAGTGCGCCTGCGCAGGGCTGGCCCGGCTGGTGCAGCAGCGGC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CGGCACTCCCGGGCCTGGCGCGACGAGACGCCGTGCGCCGCCTCGGGCCGCTGCTGCTAGACCCCAGCCTGGCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GTCAGGGAGACTGCAGCCGGCGCGCTGAGAAATCTCAGTGCTTGTGGAGGTTTTGAAGTTTGTGATGACATGGT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GACTAAGGATATCATGACCCCTCTGGTTGCGCTGCTAAAAGAGTGTAGTGCTGGACTGGATTCAAATGAGATGT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CTCTGCAGGAGAAAAAAGATCAGAACAGAAATTCTATTGAGAACATAGCCAATGAGACTGTGAACGTGCTGTGG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AATATATGTGAATGCAGTAGTAGAGCAGTGTCTATATTCAACAAAGAAGGGTGTTTGGAGATTGTGTTAAAGTA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TTTAAGTAGGTTTCCTACCAATGTTGACCTGGCTATTTCAGTAGCATATTGTTTGCAGACAGTGACTGAGGATA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ACCCAGAGCTGCTGAAGTCTTTCAGTGCTACAGCATTGAACATGCTGGAATCAGCACTGCTTTCTCCTGTCAGT  888

Query    1  ---ATGGAGTCTCAT------------------------------TCTGTCGCCCAGACTGGAGTGAAGTGGCA  41
               |||||.||||.|                              ||||||.|||||.||||||||.|||||||
Sbjct  889  TCCATGGAATCTCTTCTATTGAAGACATTGGTAGCAGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCA  962

Query   42  TGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGG  115
            .||||||||||||||||||||||||||||..|.|.|||||.|||||||.||||||.||||||..||||||||||
Sbjct  963  AGATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGTGATTCTCATGCCTCAGCCTCCCAAGTAGCTGGG  1036

Query  116  ATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGG  189
            ||||||.||.|.|.|.||||.|||.||||.|   |||||||||||||||||||||||.|||||||||||||||.
Sbjct 1037  ATTACAAGCGCCCACCACCACGCCTGGCTGA---TTTTTGTATTTTTAGTAGAGATGAGGTTTCACCATGTTGC  1107

Query  190  CCAGGCTGGTCTCGAACTCCTGACCTCAAG--------------------------------------------  219
            |||||||.|||||||||||||||||||.||                                            
Sbjct 1108  CCAGGCTTGTCTCGAACTCCTGACCTCGAGTGATCCTCCCACCTTGGCCTCCCAAAGTGTTGGGATTACAGGGC  1181

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1182  ACAATTTGGAATCTAAAGGACATTATTCCATGCAAGAGTCAAGCAGAAATCATAAATGCCTTACTAAAGATCTT  1255

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1256  ATCTGAAGTTTTGGGAATGGATGCTGGTGAAATGGTTATTCAAATGAAAGAGGCTGAAACGCAAAGGTTAAAAA  1329

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1330  CTGCTGCAGAGGCTGAGGAAATATTAGAGAACACTAATGGGGATGATTTGATTGAAGATGATGAAATGGAAGGA  1403

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1404  ATTTCTCATAAAAGAAGAGTCAGAAGGAAAACTTTCGTTTCAGATTTACTTCCGCCCACTGACAAGGAACTGAG  1477

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1478  AGAGACTATAGCATTGCTGACAGCCCAACAGACTGCTCTGGAAATTATTGTCAACATGTGCTGCAATGAAGTTC  1551

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1552  TGCGTGGTTTGCCCGCTTCCCAGATCCCTCTGATGACGAATGGGAAGAGCTTTCTAGCAGTGATGAAAGTGACG  1625

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1626  CATTTATGGAGAATTCCTTCAGTGAGTGCGGGGGACAGCTGTTTTCTCCCCTCTGCCTCTCCCATGAAGTTCAC  1699

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1700  ACGGCTCTCACCAACTACCTCATCCCAAAGAAGATTTTTGAGAAAACTGCCTTTCCAAACAGCATTGCAGTTGA  1773

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1774  CCTATGTTCTAGGAACCCTACTTGGAAACCTTTGATTAGAAAAATGAACACTATTCAGTGCAGAGCCCTCTTCT  1847

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1848  GTCTCCAGAGTCTTGTGTCCCTCCTGGATGTGGAGCACCTGGGAGGAGCCGCAGCCCTTCAGACGCTTGCACAG  1921

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1922  CATCTGTCACAGCTGCTTTTTTCTCAACCAGATTTTGCTAAACATGTTGACTTTCTAGAAGCCATAAGTAGTGC  1995

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1996  TTTGAGGGCCCTTTTGCAAACAATGGCCTCCAAGAACATTTCCCAGTGCATGACTCCTGATCAGCTGATGACAT  2069

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2070  TATGCAAAGCAGGCATTCATAGTAGTAATGTCGGGGTTAGAGTGAATGTCGTTAGCATTTTAGGAATCACTGGC  2143

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2144  AGCGTCCTTGCCAAAGAAGATGGTACACTTGAAACTCTTAAGAACATTGGGTGCTTTCTGCTTGAAGTTACCAC  2217

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2218  CAAAGATCCTTCCCTTGTGGTAGCAGGAGAAGCTTTGGATGCCCTCTTTGATGTTTTTGCAGATGGTAAAGAAG  2291

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2292  CCGAAAGAGCCTCGATTCAAATTAAATTATTATCTGCTCTGAAAGAATTCCAGCCGGTCTTTAAAATGAAGATA  2365

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2366  CGTAAAGAAGGGAGAGGTAACTATAGCACAGATCAGCTGTGTGTTCTTGACAATGTGAAAATGAATTTGCGAAG  2439

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2440  ATTTATTGCTTATCAAGAAACTGTTGAGAAAAGACTGACTTCTTAAACAATCCAAAAAAGAAACCAGTTCTTCC  2513

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2514  CCCAAAGTATTCAATGCTTAGAATACTAAAAGGTTTTCTTTGAATGTATATGTTTCTGAAAGTCATTTTTTAAT  2587

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2588  GATTACATTCTGTACATTCTGTAAAAACTTCAAAACCTGGCCAGGCATGGTGGCTCACGCCTATAATCCCAGCA  2661

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2662  CCTTGGGAGACCGAGGCGGGTGGATCACTTGAGGTCAGGAGTTTGAGGCCAGCCTGGCCAACATGGTGAAACCG  2735

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2736  CATGCATAAGCATGGTGGCACATGCCTGTGATCCCAGCTACTCGGGAGGCTGAGGGAGGAGAGTCGGTTGAACC  2809

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2810  TGGGAGACAGAGGTTGCAGTGAGCTGAGATCACGCTACTGCACTCCAGCCTGGGTGACAGAGGGAGACCCTGTC  2883

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2884  TCCAAAAAAAAAAAAAAAAAAAAACTTCAAAACCTGTCAGAAACTCTGTTGCTGGTTTTTTTGTGTGTGTGTTT  2957

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2958  TGTTTGTTTGTTTTGTTTTGTTGTTTTTTTCTTTTTTGAGATGGAGTCTCACTGCTGCCCAGGCTGTATTACAG  3031

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3032  TGCTGCGATCTTGGCTTACTGCAACCTCTGCCATTCCAGGTTCAAGCGATTCTCATGCCTCAGCCTCCTGAGTA  3105

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3106  GCTGGAATTACAGGCACCCACCACCACACCTTGTTTTTGTTTTTGGTTTTTTGGTTTGTTTTTTTTTTTCAGTA  3179

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3180  GAGACGGGTTTCACCGTGTTGGCCAGGCTGGTCTCAAATTCCTGACCTCAAGTGATCCGCCTGCCCTGGCCTCC  3253

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3254  CAAAGTGCTGGGATTACAGGCATGAGCCACCGTGCCTGGCCAGAAACTCTTTTTTAAGTGATGAGATCTGTGTG  3327

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3328  GCATTTCTAGCGCTCTCTAAATTATGTCTCTGGCATATTTTAATCACTGGAAACTCAAAGAGTGGAAGAGTGGA  3401

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3402  AGTGCGAAGGAATCTCAGGTAGCTCTTAACTAATTCGCCAGCAGTGAAGAAACTTCAACCAATCATGTTTTCCT  3475

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3476  TGAATTTTGCAAAGAAAGAAAATCCAAAGCATTGCTTGGATGTTCTTTTAAGGCATTTTATATCAGTTGAACCT  3549

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3550  TAAACTGAAATATGAAGACAAGCTTTATAAACTAGTTTTTTGATATGAAGTATATCAATTATGTTTGCCTTTTG  3623

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3624  TGAAGAAGTAAATGAGTTGAATTTCTATTTCACTTACTAGATTATACTAATGAGCTAATGGGGTCATTGCCATC  3697

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3698  CTCCCTACTCATGACTTTGATGAGTTATTGCTGTAACATCACTTCTTGATTTAATTTGATATGGAATCAGAATT  3771

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3772  GGGAGAAGGTATTTTTAAATAAACAACTTTTTAATGGAAAGTTTTGTGTCTTACAAAATCTTTTTTAAGATACC  3845

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3846  AAATAAAGGGTTATTAGTAGAAAATGAGATGATACTATTCGTGGATATTTGTTTGCTAATGCATATTGCTTGGA  3919

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3920  ATATATGTGAGACATTAAAAAAATGACAGCACGACTTTGCAGCATTACCTCTCAGTGTCTTCGAAGTACTAGGT  3993

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3994  GACAGCTGGGGCTCGAGGGAGTTTCCCTGTGCATCATTGTCTCGGCTGGGCCTCTGAACCGGCTTCATTGTCCA  4067

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4068  TCCGTTTGCCTGATGAGAAGGGAAATTTGAAAATTTCTGTACAGTTGATCTCAGTTGCCCTGACAAAAGGCCCA  4141

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4142  ATCCCCAGTACAGGACTTAATTTTAATTCACTGCTTCCACAGCAGCACAAAATGAGCTAGTAGTGTTAGATTTC  4215

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4216  ATCTGCACTGTGATGTATTTTACAGTTTTCACCTATATGATATAGACTGTTGGGAAACCAAGATTGTTTCCCAG  4289

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4290  CCCTAAGAGTTCCTAGCCCATGGCACCAAGTAAAATAACCCAAATTGTGTATATGGTGGGAAAACAGAAATGTA  4363

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4364  TACCATATACAACACCTCGCTTTATTATGGTCCTTGCTCATGAATTTTAAGGTATATATGTATGTTTAGTGATC  4437

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4438  ATTTCAGCTAAATGATTGGCCCAAGCATGTCTCCTTGGAGAACGACTCTTCCAAAAAAGAAAGTATTAGAGTTC  4511

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4512  TCTCTGCCTCAATTATTTATAAAATATAATTATTTTCAAGGAGAAAAAAGTTCCTCATTCTGTTTATTCTTCCC  4585

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4586  CACAGTTTCTGACCTATAAACAATATCCAGGATATTTAGCACAGGACCTAGTATATAGTCGACTCTTCATAAAT  4659

Query  220  -------------------------------------  219
                                                 
Sbjct 4660  ATTTGTTGAGTAAATAAATGCTGGTGATTTTCTCGTT  4696

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