Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NR_145698.1
- Aligned Length:
- 2709
- Identities:
- 190
- Gaps:
- 2495
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGTGCTGAAGTTCCAGAGCCGGTAAACGCATGCCTGGGTGCTGCTTTCACTCCTACCACCCTCAGAAAAACCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCCTGCCAAGACCGTGAGCAAGAATAGTAGAACTTCACAAGAGTTCAACAATTTTTATGAATTTCTAATCCAAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTCATCATCCTATGGGAAACAGAAGACCACCAAGAACAGCCAGCTGAGACAGAATTTCACTGTGTTGCCCAAGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAATCTTAAACTCCTGGTCTCAAGCGATCCTCCTGCCTTGGCCTCCCACTGTGCCTGGCCTATGGACTCTGAAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTTTTTAAAAGACTGGAAAAAACTTTTATAAGAGAATTGGAAATTTGGACAATGGAATCTCATTCTGTCACCAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCTGAAGTGCAGTGACGTGATCTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCCTCAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCTCCTGAGTAGCTGGGATTACAGGTATCTTGGCAGTAACCTCCTCCATATATTTCCTTGGCCCTCAGCTTACA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCTAGCAAAATGACTCTACTGGTTCCAGGCTTCACATGCATACAACATGGTGTTGGAGGAACAGAGATGTTTTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCTTCCTGGTGTTTTCCCAGACATTTCTTAGCTGGCATTTCAAACAAGGGTCCTGAAATTCACCCTGGTTGGGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CGTGTTCTCCCCTTCCCATTCCCCATCCCCACCCTCAACCGAAAAATGATGTAAGCAGGGGAAATTGAATGTAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CAATGTTTGTTTTTAAACAAGCCACAGACCCCTCCCCAACTCCCCGACTGAAGCTTGAAGTGGGATCAGCTTTC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCTAAAGTACTTGAGCTTATGGTAAAGCATATATGTTATCCAAGTTAAAGTCTGGACGCTGTTAGTAATGGGAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGCAAGTAATGAATGTTAGCTATGGAGCCAACAGACAGTGTCCACTCCATTGTCTTTAAGGCCCAACTAAAGAT 962
Query 1 -------------------------------------------------ATGGAGTCTCATTCTGTCGCCCAGA 25
|||||||||||.|||.||.||||..
Sbjct 963 AACCTCTTTACCAATGTCGGTTTATTTATTCATTTATTTATTCATTGAGATGGAGTCTCACTCTCTCACCCAAG 1036
Query 26 CTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGG 98
||||||||.|||||.||||||||.|||.|||||||..|||||||| |.||| |||||| |.||||||||.||.|
Sbjct 1037 CTGGAGTGCAGTGGAATGATCTCAGCTGACTGCAATTTCTGCCTC-CCAGGTTCAAGC-AATCTCCTGCTTCAG 1108
Query 99 CCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATG 172
|||||..|||||||||||||||||||.|||.|.||||||||||||||| ||||||||||||||||||||||.
Sbjct 1109 CCTCCCAAGTAGCTGGGATTACAGGCGCACACCACCATGCCCGGCTAA---TTTTTGTATTTTTAGTAGAGATA 1179
Query 173 GGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG--------------------------- 219
||||||||||||||||||||.||||||||||.||.||||||||||||
Sbjct 1180 GGGTTTCACCATGTTGGCCAAGCTGGTCTCGGACACCTGACCTCAAGTGATCTGCCTGCCTCGGCCCCCAAAGG 1253
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1254 TGTGAGCCACTGCACCTGGCTACAATGTCAGTTTCTATAAAAACTGCCTTGACTTGTTTTGTTTGCTTGTTTTG 1327
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1328 TTTGTTTGTGTTTTAATTTTTATTATTTTTTTTTAGAGACAGGGTCTCAATCTGTTGTCTAGGCTTGAGTGCAG 1401
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1402 TGGTGCAATCATAGCTCACTGAAGTGTTGGACTCCCAGGCTCAAGCAGTCCTCCCACCTCAGCCTCCCAAGTAG 1475
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1476 CTGAGACTACAGGCATGCACCACCCTGTCTGGCTAATTTTTTATTTTTAGTAGAGATGAGGTCTCACTATGTTG 1549
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1550 CCCAAGGTGGCCTCAAACTCCTGGCCTCAAGTACTCCTGTGGCCTTAGCCTCCCAAAGCTCTGGGATTGCAGGT 1623
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1624 ATGAGCCGCCATGCCTGGCCTACTGTATATTTTATGCATTTGATATAAGTCTTGCCTCCCTAAGTATATTACAA 1697
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1698 GTCCCTTGAAGTTAAAGACATTAGATTCCTACTCAGTGCTGAGCTGCAACAGAGAGCACTCAATGATGGATAAA 1771
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1772 ATAGTTTTAGCATGCATTCAGCGATATATATTTAGAAAGTGGAACTAGGTGGTTGAAAAAAGTGTATAGATGGG 1845
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1846 TGGAAGGGAATATTACAGCTCTTAGAATTGTCCTAAGGTGAGAGTAACAAATTAAGCAATGAGTCCCTGGGTTC 1919
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1920 ACTCAAGCAACTTCACTCTCTAAAACAAGAGCCCACAGAATCCCATTTCTGCTTTCAGAATGAGTTTGAGGCCA 1993
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1994 ATATTATTTCCATTTTTTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCACTCTT 2067
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2068 GTTGCCCAGGCTGTTTTGATCTCGGCTCACTGCAACCTCTGCCCCTGGGTTCAAGCGATTCTCCTGTCTCAACC 2141
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2142 TCCCAAGCTGGGATTACAAGCATGCGCTACCACACCTGGCTAATTTTGTATTTTTAATAGAGACGGGGTTTCTC 2215
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2216 TGTGTTGGTCAGGCTGGTCTCAAACTCCCAACCTCAGGTGATCTGCCCACCTTGGCCCAGCCTCCAATATGATT 2289
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2290 TTCTAATAGCTGTGTTTGATGATTATATTTATTCCTCCATCAGTAGCTTTTTTAGCCTTGAAAATATCTATTTA 2363
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2364 AGTTTCTTATTTCCTTTGGATCTATCAAAGTGTTTTTCCCCAAGTGGCACCTGGGAAAACATATTCTATTCATT 2437
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2438 TATTTTATAACTGTTCCCTTGACCTCTTTATTGCTTCCCTATTACAACCCAAGATGCTCTTGTAAACCTGACTT 2511
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2512 AATATTGGCAGTCTTCATCCCTTGCAAATGGAAGTGATGACAGACCCAATACTTTGTGTAAAAATATTTTGCTA 2585
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2586 TTTCTATACAAAATATTTTATTAATGGAAACCACATGTTATGTATTTTACATATGTTATGACTTGAAATTTATG 2659
Query 220 --------------------------------------------- 219
Sbjct 2660 TTATGACTTGAAATTGGGGAATCTGATATGTCTCTAATAATAAAG 2704
