Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NR_145703.1
- Aligned Length:
- 2501
- Identities:
- 190
- Gaps:
- 2287
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTTCTTCCCGGGGGCGAAGGGCTGTGAAAGTTCAACAATTTTTATGAATTTCTAATCCAACCTCATCATCCTAT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGAAACAGAAGACCACCAAGAACAGCCAGCTGAGACAGAATTTCACTGTGTTGCCCAAGCCAATCTTAAACTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGGTCTCAAGCGATCCTCCTGCCTTGGCCTCCCACTGTGCCTGGCCTATGGACTCTGAATTTTTTTAAAAGAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGGAAAAAACTTTTATAAGAGAATTGGAAATTTGGACAGTATCTTGGCAGTAACCTCCTCCATATATTTCCTTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCCCTCAGCTTACATCTAGCAAAATGACTCTACTGGTTCCAGGCTTCACATGCATACAACATGGTGTTGGAGGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACAGAGATGTTTTCTCTTCCTGGTGTTTTCCCAGACATTTCTTAGCTGGCATTTCAAACAAGGGTCCTGAAATT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CACCCTGGTTGGGTCGTGTTCTCCCCTTCCCATTCCCCATCCCCACCCTCAACCGAAAAATGATGTAAGCAGGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAAATTGAATGTACCAATGTTTGTTTTTAAACAAGCCACAGACCCCTCCCCAACTCCCCGACTGAAGCTTGAAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGGGATCAGCTTTCCCTAAAGTACTTGAGCTTATGGTAAAGCATATATGTTATCCAAGTTAAAGTCTGGACGCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTTAGTAATGGGAAGGCAAGTAATGAATGTTAGCTATGGAGCCAACAGACAGTGTCCACTCCATTGTCTTTAAG 740
Query 1 ---------------------------------------------------------------ATGGAGTCTCA 11
|||||||||||
Sbjct 741 GCCCAACTAAAGATAACCTCTTTACCAATGTCGGTTTATTTATTCATTTATTTATTCATTGAGATGGAGTCTCA 814
Query 12 TTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGA 84
.|||.||.||||..||||||||.|||||.||||||||.|||.|||||||..|||||||| |.||| |||||| |
Sbjct 815 CTCTCTCACCCAAGCTGGAGTGCAGTGGAATGATCTCAGCTGACTGCAATTTCTGCCTC-CCAGGTTCAAGC-A 886
Query 85 TTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTAT 158
.||||||||.||.||||||..|||||||||||||||||||.|||.|.||||||||||||||| |||||||||
Sbjct 887 ATCTCCTGCTTCAGCCTCCCAAGTAGCTGGGATTACAGGCGCACACCACCATGCCCGGCTAA---TTTTTGTAT 957
Query 159 TTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------------- 219
|||||||||||||.||||||||||||||||||||.||||||||||.||.||||||||||||
Sbjct 958 TTTTAGTAGAGATAGGGTTTCACCATGTTGGCCAAGCTGGTCTCGGACACCTGACCTCAAGTGATCTGCCTGCC 1031
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1032 TCGGCCCCCAAAGGTGTGAGCCACTGCACCTGGCTACAATGTCAGTTTCTATAAAAACTGCCTTGACTTGTTTT 1105
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1106 GTTTGCTTGTTTTGTTTGTTTGTGTTTTAATTTTTATTATTTTTTTTTAGAGACAGGGTCTCAATCTGTTGTCT 1179
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1180 AGGCTTGAGTGCAGTGGTGCAATCATAGCTCACTGAAGTGTTGGACTCCCAGGCTCAAGCAGTCCTCCCACCTC 1253
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1254 AGCCTCCCAAGTAGCTGAGACTACAGGCATGCACCACCCTGTCTGGCTAATTTTTTATTTTTAGTAGAGATGAG 1327
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1328 GTCTCACTATGTTGCCCAAGGTGGCCTCAAACTCCTGGCCTCAAGTACTCCTGTGGCCTTAGCCTCCCAAAGCT 1401
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1402 CTGGGATTGCAGGTATGAGCCGCCATGCCTGGCCTACTGTATATTTTATGCATTTGATATAAGTCTTGCCTCCC 1475
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1476 TAAGTATATTACAAGTCCCTTGAAGTTAAAGACATTAGATTCCTACTCAGTGCTGAGCTGCAACAGAGAGCACT 1549
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1550 CAATGATGGATAAAATAGTTTTAGCATGCATTCAGCGATATATATTTAGAAAGTGGAACTAGGTGGTTGAAAAA 1623
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1624 AGTGTATAGATGGGTGGAAGGGAATATTACAGCTCTTAGAATTGTCCTAAGGTGAGAGTAACAAATTAAGCAAT 1697
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1698 GAGTCCCTGGGTTCACTCAAGCAACTTCACTCTCTAAAACAAGAGCCCACAGAATCCCATTTCTGCTTTCAGAA 1771
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1772 TGAGTTTGAGGCCAATATTATTTCCATTTTTTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTGAGAC 1845
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1846 GGAGTTTCACTCTTGTTGCCCAGGCTGTTTTGATCTCGGCTCACTGCAACCTCTGCCCCTGGGTTCAAGCGATT 1919
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1920 CTCCTGTCTCAACCTCCCAAGCTGGGATTACAAGCATGCGCTACCACACCTGGCTAATTTTGTATTTTTAATAG 1993
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1994 AGACGGGGTTTCTCTGTGTTGGTCAGGCTGGTCTCAAACTCCCAACCTCAGGTGATCTGCCCACCTTGGCCCAG 2067
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2068 CCTCCAATATGATTTTCTAATAGCTGTGTTTGATGATTATATTTATTCCTCCATCAGTAGCTTTTTTAGCCTTG 2141
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2142 AAAATATCTATTTAAGTTTCTTATTTCCTTTGGATCTATCAAAGTGTTTTTCCCCAAGTGGCACCTGGGAAAAC 2215
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2216 ATATTCTATTCATTTATTTTATAACTGTTCCCTTGACCTCTTTATTGCTTCCCTATTACAACCCAAGATGCTCT 2289
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2290 TGTAAACCTGACTTAATATTGGCAGTCTTCATCCCTTGCAAATGGAAGTGATGACAGACCCAATACTTTGTGTA 2363
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2364 AAAATATTTTGCTATTTCTATACAAAATATTTTATTAATGGAAACCACATGTTATGTATTTTACATATGTTATG 2437
Query 220 ----------------------------------------------------------- 219
Sbjct 2438 ACTTGAAATTTATGTTATGACTTGAAATTGGGGAATCTGATATGTCTCTAATAATAAAG 2496
