Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NR_145704.1
- Aligned Length:
- 2735
- Identities:
- 190
- Gaps:
- 2521
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTGTGGGAAACCGCGCTGGACGCTGAGAATGTGCGGAAGGATCCTGAGGGGAGGACGCGAGACAGCGCGAGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAGACGAGGAGAGTTAGGGTTGGCCGGGAGGGTGCGAAGATGAAGCGACCACTGGAGGCTGTGAGGGTGAAAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGCAAGAATCGTCTAGAGACGGGCTGGGCCGGTGCTGGGGCCAAAGGCTTCTGTCTGTCAGGCCCTTTTTGGCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTCACTCTAGAAAGAAGAGGCGGAGACGCGAAGAGATCGGAGTTCAACAATTTTTATGAATTTCTAATCCAACC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCATCATCCTATGGGAAACAGAAGACCACCAAGAACAGCCAGCTGAGACAGAATTTCACTGTGTTGCCCAAGCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AATCTTAAACTCCTGGTCTCAAGCGATCCTCCTGCCTTGGCCTCCCACTGTGCCTGGCCTATGGACTCTGAATT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTTTTAAAAGACTGGAAAAAACTTTTATAAGAGAATTGGAAATTTGGACAGTATCTTGGCAGTAACCTCCTCCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TATATTTCCTTGGCCCTCAGCTTACATCTAGCAAAATGACTCTACTGGTTCCAGGCTTCACATGCATACAACAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGTGTTGGAGGAACAGAGATGTTTTCTCTTCCTGGTGTTTTCCCAGACATTTCTTAGCTGGCATTTCAAACAAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGTCCTGAAATTCACCCTGGTTGGGTCGTGTTCTCCCCTTCCCATTCCCCATCCCCACCCTCAACCGAAAAATG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ATGTAAGCAGGGGAAATTGAATGTACCAATGTTTGTTTTTAAACAAGCCACAGACCCCTCCCCAACTCCCCGAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGAAGCTTGAAGTGGGATCAGCTTTCCCTAAAGTACTTGAGCTTATGGTAAAGCATATATGTTATCCAAGTTAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGTCTGGACGCTGTTAGTAATGGGAAGGCAAGTAATGAATGTTAGCTATGGAGCCAACAGACAGTGTCCACTCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ATTGTCTTTAAGGCCCAACTAAAGATAACCTCTTTACCAATGTCGGTTTATTTATTCATTTATTTATTCATTGA 1036
Query 1 -ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCG 73
|||||||||||.|||.||.||||..||||||||.|||||.||||||||.|||.|||||||..|||||||| |.
Sbjct 1037 GATGGAGTCTCACTCTCTCACCCAAGCTGGAGTGCAGTGGAATGATCTCAGCTGACTGCAATTTCTGCCTC-CC 1109
Query 74 AGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAA 146
||| |||||| |.||||||||.||.||||||..|||||||||||||||||||.|||.|.|||||||||||||||
Sbjct 1110 AGGTTCAAGC-AATCTCCTGCTTCAGCCTCCCAAGTAGCTGGGATTACAGGCGCACACCACCATGCCCGGCTAA 1182
Query 147 TTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG- 219
||||||||||||||||||||||.||||||||||||||||||||.||||||||||.||.||||||||||||
Sbjct 1183 ---TTTTTGTATTTTTAGTAGAGATAGGGTTTCACCATGTTGGCCAAGCTGGTCTCGGACACCTGACCTCAAGT 1253
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1254 GATCTGCCTGCCTCGGCCCCCAAAGGTGTGAGCCACTGCACCTGGCTACAATGTCAGTTTCTATAAAAACTGCC 1327
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1328 TTGACTTGTTTTGTTTGCTTGTTTTGTTTGTTTGTGTTTTAATTTTTATTATTTTTTTTTAGAGACAGGGTCTC 1401
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1402 AATCTGTTGTCTAGGCTTGAGTGCAGTGGTGCAATCATAGCTCACTGAAGTGTTGGACTCCCAGGCTCAAGCAG 1475
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1476 TCCTCCCACCTCAGCCTCCCAAGTAGCTGAGACTACAGGCATGCACCACCCTGTCTGGCTAATTTTTTATTTTT 1549
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1550 AGTAGAGATGAGGTCTCACTATGTTGCCCAAGGTGGCCTCAAACTCCTGGCCTCAAGTACTCCTGTGGCCTTAG 1623
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1624 CCTCCCAAAGCTCTGGGATTGCAGGTATGAGCCGCCATGCCTGGCCTACTGTATATTTTATGCATTTGATATAA 1697
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1698 GTCTTGCCTCCCTAAGTATATTACAAGTCCCTTGAAGTTAAAGACATTAGATTCCTACTCAGTGCTGAGCTGCA 1771
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1772 ACAGAGAGCACTCAATGATGGATAAAATAGTTTTAGCATGCATTCAGCGATATATATTTAGAAAGTGGAACTAG 1845
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1846 GTGGTTGAAAAAAGTGTATAGATGGGTGGAAGGGAATATTACAGCTCTTAGAATTGTCCTAAGGTGAGAGTAAC 1919
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1920 AAATTAAGCAATGAGTCCCTGGGTTCACTCAAGCAACTTCACTCTCTAAAACAAGAGCCCACAGAATCCCATTT 1993
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1994 CTGCTTTCAGAATGAGTTTGAGGCCAATATTATTTCCATTTTTTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTT 2067
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2068 TTTTTTTGAGACGGAGTTTCACTCTTGTTGCCCAGGCTGTTTTGATCTCGGCTCACTGCAACCTCTGCCCCTGG 2141
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2142 GTTCAAGCGATTCTCCTGTCTCAACCTCCCAAGCTGGGATTACAAGCATGCGCTACCACACCTGGCTAATTTTG 2215
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2216 TATTTTTAATAGAGACGGGGTTTCTCTGTGTTGGTCAGGCTGGTCTCAAACTCCCAACCTCAGGTGATCTGCCC 2289
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2290 ACCTTGGCCCAGCCTCCAATATGATTTTCTAATAGCTGTGTTTGATGATTATATTTATTCCTCCATCAGTAGCT 2363
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2364 TTTTTAGCCTTGAAAATATCTATTTAAGTTTCTTATTTCCTTTGGATCTATCAAAGTGTTTTTCCCCAAGTGGC 2437
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2438 ACCTGGGAAAACATATTCTATTCATTTATTTTATAACTGTTCCCTTGACCTCTTTATTGCTTCCCTATTACAAC 2511
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2512 CCAAGATGCTCTTGTAAACCTGACTTAATATTGGCAGTCTTCATCCCTTGCAAATGGAAGTGATGACAGACCCA 2585
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2586 ATACTTTGTGTAAAAATATTTTGCTATTTCTATACAAAATATTTTATTAATGGAAACCACATGTTATGTATTTT 2659
Query 220 ----------------------------------------------------------------------- 219
Sbjct 2660 ACATATGTTATGACTTGAAATTTATGTTATGACTTGAAATTGGGGAATCTGATATGTCTCTAATAATAAAG 2730
