Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NR_146295.2
- Aligned Length:
- 4897
- Identities:
- 188
- Gaps:
- 4683
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTGCCATGGTGATCGCCGCCGCTGGCTCAGGCGGACCAGGCCGCGCGGAGCCCCAGCTTTCACAGCCATCGCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGGTACACGCCGGAAGCCTGTTTGCAGCTCAGGGAGCACTTCCACGGGCAGGTCAGCGCTGCCTGCCAACGCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGAACACGGGGACTGTCGGGCTCAAACTCTCCAAGGTGGTGGTGGTTGGCGATCTCTACGTGGGGAAGACCAGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTCATCCACAGGTTTTGCAAGAATGTTTTTGATCGAGACTACAAGGCCACCATTGGGGTGGACTTTGAAATTGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCGCTTTGAGATTGCTGGGATTCCCTATAGCCTCCAGATCTGGGACACAGCTGGGCAGGAGAAGTTCAAGTGCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCGCATCTGCCTACTACCGGGGTGCCCAGGTGATCATCACGGCCTTTGACCTCACTGACGTGCAGACCCTGGAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CATACCAGGCAGTGGTTGGAGGATGCTCTGAGGGAGAACGAGGCAGGCTCCTGCTTCATCTTCCTCGTGGGAAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAAGAAGGACCTTCTGGGGCCGCATGTGAGCAGGCCGAAGCAGACGCTGTGCACCTGGCCAGGGAGATGCAGGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CGAGTACTGGTCAGTGTCGGCCAAGACTGGCGAGAACGTGAAGGCATTCTTCAGCCGCGTAGCCGCCCTGGCAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCGAGCAGTCGGTGCTGCAGGACCTGGAGAGGCAGAGCAGTGCCCGGCTCCAGGTCGGCAATGGAGACCTAATC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CAAATGGAAGGGAGTCCGCCCGAGACCCAGGAGAGCAAGAGGCCCTCCAGCCTGGGCTGCTGCTAACTGGGGCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGCGTGGAAGGCCTCCGCTCCCTGCACACACACGGACAGGAATTTCCGTGACTGTGGTGTGGAGACTGGAGCCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AAGCTCTGCAGCGTGTCGCCCTCAAGCTGTAGGCCCATGTTCCAGTCCCTCCACCCACCCACCGGGCTCAGCTC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAGGGCACAGTCACTTGTCCGTTGCAGGTTGGGCACTAGAAAAGGCCCCCACTGGCTGCCTGGGAGCCCCACAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CACCGGGCCAGTGCAGGCACTGTGGTGATCCCATAAAAGGCCAGTCCATTTGCAGGGTCATCAGACAGTCACCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTGGCCTCAAGAGGCCTCAGAACTGCAAACTCCTGCGTCGGTCTATACTACTCGGCCATGGCCCACATCAGCAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCAACCCTGCACTCTTTCCCAGCGATCTTGGATGTGTCCCCAGGATCCGTCACAGTGTTCCAGGCAACCTGGAC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTGTCAAAGTCAGCACCTGAAGGAGAGGCCACCTGCCATTCCCCCTGGGAGTTTTCTGTTGTCAGCAGGACTTA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGGTTCTGGGTCTCAGAGCTTCAGGCCTCACTGTCCTTCTGCCACGGATGCTCAAGGTTCCTGGGCAGACCAGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ACCTCTGGAGGACAATGGACAAAATGTCTCTTAGACCTGTTCTGGCTGAAGGGCTATCTCTGGCACCTCTGAGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TCCCTAGGTCCTGCCCTCCTGGTCCGTGGGCCAGGATGTGCAGAACAACCACTCAGGCCTTTCTGGCCCACCTG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GACAGTGCATTTACCTGTGTGCTGCGGGAGGCAGACTGCACAGCTGTCCTAGGGTAACTCACTCTGCAGCCCTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GAACATGGCACTGCCCTCCTCTGGCACTCATGCTGGGCCTGTGCCCACTGCTGCCTCTCCATCCCTCTCTCATT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGCCTATACATCTCTTAGGACCTTTGTAATGGTGTCCATGCACCTTTAGAGGACTTCAGAGGCCCTGCCAAGTC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TAGCATGTTCCTGTCTCCAACACCGCCTCCTGCACATGCAGAGCAGACAGAAATACCCCACACATTCCCCAGCC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TCTCTGCCCAGTATGCTCATCCACAGGGTTTTCTCACTGCTATGAACCAGCCCCACAGCCCCAGGCCCCTGTCA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCTGGCTATGCCCACTCATCCCACCCGTCTCGTGCTGTTGCTTCCCGTAGATGGCGAGCACCTTGCAGGCAGCC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TTCTGATCAGTACTGCTCTCCTAGGGCCTGGCACACTGCAGCTGCCCTGTAAATGTTCAGCTCAGCGATTGCCA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AATACCAGTTAGGGAAGAACACTGGCATCTTTTTCTATTCATTCCCCCTTCAACATATTTTTTGTAGTTTTTTA 2146
Query 1 ---------------------------ATGGAGTCTCATTC-TGTCGCCCAGACTGGAGTGAAGTGGCATGATC 46
|||||||.|||..| |||.||||||.||||||||.|.||||.|.|||
Sbjct 2147 TATAAATGACTTTTTTTTTTTTTTGAGATGGAGTTTCACCCTTGTTGCCCAGGCTGGAGTGCAATGGCGTAATC 2220
Query 47 TCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTA 119
||||||||.||||||||||||||| |.||| |.||||||||||||||||||.||||||..||||||||||||||
Sbjct 2221 TCGGCTCAGTGCAACCTCTGCCTC-CCAGGTTGAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTA 2293
Query 120 CAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAG 193
||||||..|.|.||||||||.|||||| |||||||||||||||||||||||||||||.|||||||||.|||
Sbjct 2294 CAGGCATGCACCACCATGCCTGGCTAA----TTTTGTATTTTTAGTAGAGATGGGGTTTCTCCATGTTGGTCAG 2363
Query 194 GCTGGTCTCGAACTCCTGACCTCAAG------------------------------------------------ 219
||||.|||||.||||||||.||||.|
Sbjct 2364 GCTGCTCTCGGACTCCTGATCTCAGGTGACCTGCCCACCTCGGCCTCCCGAAGTGCTGGGATTACAAGGGTGAG 2437
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2438 CCACCATGCCCGGCCATAAATGATTTTATTCATTTTTATGTTTTCTTTTGGGCGGCGGGATGGAGTCTCTGTCA 2511
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2512 CCCAGGCTGGCGTGCAATGGCACGATCTTGGCTCACTGCAAGCTTCCCCTTCCGGGTTCATGCCATTCTCCTGC 2585
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2586 CTCAGCCTCCCGAGTAGCTGGGACTACAGGCACGTGTGACCATGCCGGGCTAATTTTTTATATTTTTAGTAGAG 2659
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2660 AGAGGTTTCACCGTGTTAGCCAGGATGGTCTCGATGATCTGACCTCGTGATCTGCCCGCCTCGGCCTCCCAAAG 2733
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2734 TGCTGGGATTACAGGCCTGAGCCACCGCGTCCGGCCTCCATAAATGACTTTTAAAGGGGTTGTATGTTTAGTGT 2807
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2808 GAACAAAGACAGTACAAAGCATATAAAATACAAGGTGAAAGCCCCCCCCCCGCCACATTAGCTGCGCCCCTGAA 2881
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2882 GTGTCTCCAGCAGAAGAGATGGATGAATGGAAGGACACACAGATGGACAGAGAGCAGGAAAGACTGTTAGCTCT 2955
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2956 GCTAACAGTCAGGACTATTCCTTCTGGACTCTGTGCCTTTGCCTGCACAGCTAGTGTTGATGGCTTGTTTGTTG 3029
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3030 TTTTCACCAGAGTGAGCTCCTTCTGGACATACTGCCTGGCAGCCTGCCTTCCTAGGGAGCTGGCGCCAAGGCCT 3103
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3104 CTCCCTGATGGCACACAAGGAGCCTCCTTCCTGTAGCAGCGCCCAGTTTTCATGTGGATGGATTGTAGTTCATT 3177
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3178 TGACCCTCCCCATCCGCGGGCCATCCGGCTTGTGTCCAGCTTTTAGCTCTTGCCAATGGTGCTGCAGTGGCCAT 3251
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3252 TCTTGTAGTTATAGCTTTGCGTACTCAGGAAGGCCCTTCTCCCGACTGCGGCCCCCAGCCTGGTCCACTAAATG 3325
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3326 CAGCCTGTGGTCGGGCAGACAGCATTGGGGTCCATTAGGAAGACCAGGTTTGCTGGGCATAAGCTTCACAGGAC 3399
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3400 GGGAGAACCTGCCCATGGTGGACTGTCGTTCTCCACAGCTCCCTTCCCTTGCCCCTTCGGGCCTCCAGGATATG 3473
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3474 TTTGCGGGGGTGGGTGTGGTGTCCAGCTGTTACCAGCTTCTGAGCTAGAGCTGTACTGCCTCACGTACACCCCC 3547
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3548 ACCTCTGTAAATGGTCCTTGATTAAATCGTCCTCATATTACCTCCTGCAATGTGCCAGCTGATTCCCACACACC 3621
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3622 CTGACTGACATAGTTGTGGCCTCTCGAACTTTGATATTTGGCCTGGGAGGACAGAAGAGTAAGGTCGCCACGGA 3695
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3696 AACGCAAGGGGCTCAGTTGTCCCCCCACCCCAAGTTGATGCAGCATCTTCTCGGTCAGAATTGCTTCAGGGTGG 3769
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3770 TTTGCGCACCCTCACTTTGATGATTTAATGAAGACATTTCCTTCTTTCCCAGCATCGGGCAGTAAGTTTCCTGG 3843
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3844 GCAGAGGCACTTTCTGTTGGTCTGGTCTTGTGGGCCCAGGCAAGCAGCCCCCTGCAGCCAAGGTGCGGCAATGA 3917
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3918 CCACAGTGACCGCGTCCAAGTGCTGCCGAAACGCCTTTTTCCTCTTCCCTGTTTCCCTGGACCCTTTCCTGCTC 3991
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3992 TCTGTCCATCTGTGTGTCCTTCCGTTCACCTGTCTCTTCTGCTGGAGACACGTACCTGAAGCAGGTCCTCTCCT 4065
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4066 GTCACTTCCTGGCTCCCCAGGGCTAGGTCCCAGGGTGCTCTCGCTCTGGCTTTCGAGGCTCCTCACCACCCAGC 4139
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4140 CCACCCCACCCCCACAGGCCCCTGTGCTCCAGTTTCATCCCTGGTCACAATGCAGTCTGCAGATGCCAGACCCC 4213
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4214 TCTTCTGTGCCCAACGGCTGGGACACCCCTACTCCCAGAGAGGCCTCTGTGGACACCCCCACAGCTCTCGCAGC 4287
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4288 ACTTGATACCTTGAGTGTGATTGGTCACATCTGGGCTTTCTCCCCCACCCATCTGTGGAACCCCAAGAGCCAGG 4361
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4362 ACAGTGACCTCATCACCTCTACTGTCTCCCCTAGCACCTCTGGGAGGAAGGGCCCACAGTAGGTGCTCAATAGA 4435
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4436 TGTGTAAAGAAGGCAGGGAAGCAAGAAGGTTGCTCAAACAAGACCATGTTCCCAGCAGACAGATTGCACTCTGA 4509
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4510 CCCAGATGCCACCACACGAAACTTACACCTGCCTGGGGAACAATCCTGTGCTTGGCTCTCCTTGGTGGCCAGGG 4583
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4584 ACAGTTGTGCCTCATCCCTCACTTGCAAACCCCAGTCCTGTCTGACCCAGAGACCCTCACAGGGCATCAGCCAG 4657
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4658 TGAAGGCGGTTTGGGGCTGGAGGATATGTTCTGATCTTGGGAAGAGCTTGGTAGGAGCCAGCCACAGAAAGTTT 4731
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4732 CAGGGCAGAACTGAACAGGTCTCGGGAAGGACACTTCATGCCAGCTAGAGAGGCTCTGGGCACAGGAAAGAATT 4805
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4806 GGACTTCGGGCAGAAAAATGTTTGTGCTATTTAGTACTATGTAACAAATCACTCCAAAACTTCATTGCTTAAAG 4879
Query 220 ------------- 219
Sbjct 4880 CAACAAGCATGTA 4892
