Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NR_146581.1
- Aligned Length:
- 4480
- Identities:
- 190
- Gaps:
- 4263
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTTCCGCCCGCCTCTTCAACGCGCACGCTGCTACCGAGCTGCAGGAGGCCGCGGGCGCGAGACTGGGAATGCGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGGCCCCCGCCTGGCTCTACAAGCCCGGGCCGCGGCCCCCGCCTTCCCCGCCGCCTCCCGGCGCTCCGTGCCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCCCACGAGGCCGGCGGCTGCTGCTACCTGGGGCCGTTGCTGCTTGTGCCGTGAGCGACGGCCAGCCATTGTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCCGCCGCTCCGTCAGCCGCGCCCGGCCGCGCGCGCACCGGAAGGCGCATTGGCGTCTTGCGGGCTCCGGGCCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGTGGGCAGGATGGCCTCCACAAGCCGCATGGCGCGCATGGGGAGCCTCCGTTGATGCCGCCGCGCCGCCCTCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAGGCTGCATCCGCGGAAGCCCGGCTCCCCGAGCGCTCCGGCCCGGCCCGGCGCCCCGGACCTGAGTGCGTCCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CATGAAGGCGCCCGGGCTGGCCCAGGCGGCCGTGGCAGAGGAGACCCCGGACTGGGCGCCCGAGCTCTGCCCCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCCCCGAGTCGCGGTCGCCGGAGCCGCCTGCCAACCGCCTTCAAGACTTCGACACGCTGGTCACCGTGGGAAAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAACTAGAAGCCATTTGTGTCAAGGTAACGTCTGGAGAAACAAAAGGTCAGGAACGGCCAACGTCCCTACTGGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CACAGTCTAGCCCCAATCTGCAAGACAGAGCCAGCCGCCCCGGGGGAATTCCCGCCTGGTGGGACTCCACGTCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCAGCCCCCAGCTGCTCAGGGTACAGCCCCTCGTGAGAACCGAGCCACAGTCATGTTTCCTACATCAGCCTCCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCTCAGGGGTTTGTACAGAGACCACTGCCAGCCCTCTAGGTGGTCCCTGCAAAGAAAGTCCCAGCTCCCAAGGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCCAAATGGACAGGGCACCATGTTGACCCCTTCGTTGGCCTCCAGTTCGCCGACTGTAACATGTTTCATCCAGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCAGGACGTTTATTTATTTCCAACTTGCATACAAAACATACTGAGAAACTAAAACCATCGTTAAAAGTGAAGAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACGTTGAGACAGGTATCTCGACCTGCCAAGTATACAGCTAAAGCTGAGTTCATAAAAAGGGATGATTTGGCCGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CGGTCATCTGCCAGATTCTGATGATGATTCAGAAGTCAGTGTGGAAGAAGATCAGAGGGAGAGGCAGGCGCTCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTGACTTATCAAGCTGCTCCCTGAGGCCCAAAAGCTTCAAGTGTCAGACTTGTAAAAAGTCATATATAGGGAAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGGGGACTGGCCCAGCATTTTAAACTTAATCCAGGCCATGGCCAGCTGGACCCTGAGATGGTGCTATCTGAGAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGCCAATGGGAGCACCCTCCGGGGGTGCACAGAGGAAAGGACGCTCAGCCTGACCTTCCCGAGGCTGTCCGTGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CAGCGGCTCCGCGTGAGGGAGGGGCCCGCTCCTGCTTGGTGAACTGTCACCCCTACAACTCAGCTTGCAACCAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCCTGGCCACCACCAGTTTCCCCACACTGAGCTGAATATTGGACATGCCCATCTTAGACATTCCAGCCCATTCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GAAATTCCACATCGATTCACCCGACAAAGTCTGAAGTTCCAGGGCAATTTATCTGGAAAAGCTCACCTGGAATC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ATGTGTCATTTCAACCAACAACTGTTGAAGAGGACGTGGCATCAAAACCAAGTATTGGAGACCAGGAATCTGAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ATCAAGGTGTGGGCAGGGGTGCGCTCCCCCTGGAGGTTCTAGGAGAGGATCCTTCCTGCCTCTTCCAGCTCCTG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GTGGCTCCAGGTGTCCCTGGGCTTGTGGCCACATCACTACATTCTCTGCCTCCATCTCCACGTGACCTTTTCCT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CTGTGTCTGTGTCTCCTCTTCTGTCTCTTAGAAGGACACTGGTCATTGGATTTAAAGGCCACCTGGGTAATTTA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TAGTGATCTAATCTCAAGAATCTTTCCTTAATTACATGCAAATACTCTTTATCCAAATTAGTTTGCATTCACAA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATTCTGGAGCTTAGTACTTGGACATATATTTTGGGGGGTTGATGGTTGGAGGGGCTTTTATTCAACTCAGTACA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TCTTAATAAGGAATTAATGCCCCCCAACTTGCCTTACAAGTCATATATTAAAAACAATGTTGGCCTGGCACAGT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GGCTCATGCCCGTAATCTCAACACTTTGGGAAGCCAAGGGAGGAGGATCACTTGAGCCCAGGAGTTGGAGACCA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GCCTGGATAACAAAGGGAGACCCAGTTTCTACAAAATATTTAAAAATTAGCCAGGCATGATGGTGCATGCCTGT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GGTCCTAGCTATTCAGGAAACTGAGGTGGGAGGATCACTTGAGCCTGGAAGTTCAAGACAGCAGTGAGCTATGC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TCACACCACTGCACTCCATCCTGGGCAACAGAGCTGGACTCTGTCTCAAAAAACATAACACTAAAACATCAAAA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TTAAAAAAAAAAAAACAATGAAAGTAGCCTCCACTTACAAACTAATTACTCTTTCTTGAAAATATTACACTTTT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TTTCTTCTATATCTCTACTCCTAGCTCTCAACACCTTTCTTAAGCCCACATCATAACCTGTCTTGCATAACTTT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GTGAGTGCCCAACGTTTCACTGTACAAGATTGTAGAGCTGCATGCTTCTTAAGAATAAATCCACACTTTAGGTA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CCAGTAAATCCATGCAATGCCTCAGACGTTATAACCAAATAATGCCTGGAAAATCGACATGAATTTATGTGAAG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CATAAGCCTTTAATTTTTTTAAAGAAAAGTAGATTGCTGTTTTTCCACATCATTTCAGAGCCGTTCTCTAGTTT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TGCATGCCCTTTACTGCAGAACCATACAGATTTTGTTCTCCATTTCATACATCATTTGTTGAAATGCCCTTTAA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 AATGTAACGGAATATAGAGCTTTATGGGAAAAAATGCTGTAGAAAATAAATTATCTTCTCTCTTTGTATTGGGA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 ACCAAAAGGTCTCACCTTATTAATGACCACAGAGACTCTCCTAAAGCAATTCTGGAAGTCAAAACAGCTGGAGT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CTAGTTTAATGGGAACCCTCATTAATTAGACAAGAACACCAAGGCTATGACCACAGCAGCTGGTAGCAGCAGCC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CTGCAGTGAAGTAGACTCTCAGAGGACACAAGGAAAGAGTGTATTGATAAGAAATCTACAGCAAAGGTGTAGCA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CATCATCATTTGATCTTGATACACTTGACTGTGGGCAAAGTACCTGTTATGTAAAACATGCTTTGTTAGTTAGG 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 GCCATGATAAGCTGCTTAAGCTGATGAATGAACACCAAATCTCAGTGTTTTTTTTTTTTTTTTTGGTTTTTTTT 3330
Query 1 ------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCC 68
|..||||||||.||||||||||||.||||||||.|||||..|||||||.|||||||||||.|||.|||
Sbjct 3331 TTTGAGACAGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGGGTGATCTCAGCTCACTGCAAGCTCCGCC 3404
Query 69 TCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCG 141
|| |.||| |||.||.|||||||||||||.||||||.||||||||||||.|||||||.|.|||.|||||||||.
Sbjct 3405 TC-CCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCATGCCCA 3477
Query 142 GCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCT 215
||||| |||||||||||||||||||||||.|.||||||||||||||.||||||.|||||||.|.||||||||||
Sbjct 3478 GCTAA-TTTTTTTGTATTTTTAGTAGAGACGAGGTTTCACCATGTTAGCCAGGATGGTCTCAATCTCCTGACCT 3550
Query 216 CAAG---------------------------------------------------------------------- 219
||.|
Sbjct 3551 CATGATCCGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCACCCAGCCCGTATTTTT 3624
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3625 TTTTCTAACAAATACCTGGTGTTAAGCCCAAAGTGTGTGTTTCTGGTTGGCTGGTGATGCTCTTTCAAGTCCTG 3698
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3699 AATCAGGGACCCAATAACTTTCAACATTGTGGCTCAGCTCTCTTCAACAGCTGCCTCCAAGTTCTCTTGAGATA 3772
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3773 TTGGTATTTATCAGAGGAGAGGGGATGGAGAAGGTATATGCCTTTGCTAGAGCTGCCATAACAAAGGACTGTAG 3846
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3847 ACTGAGGGGCTTAAACAACAGAAATTTATTTCCTTACAATCCTGGAGGTCGGAAGTCTGAGATCAAGGTGTGGG 3920
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3921 CAGGGCTGGTTCCTCCTGAGGCCTCTCTCCTTGGCTTGTAGACTCTGTGTTCTCCCTTTGTCCTCATACAGTCG 3994
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3995 TCTCTCTGTGTGTGTCTGTGTCCTCATCTCTTCTTATGAGGTGTCTTAGTCCATTTCAAGCTGCTATAACAGAA 4068
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4069 CACCATAGACTGCAGGGCTTAAACAACAGACATTTATTCTCCCATTGTCTTGGAGGCTATCTATCTACCTATGT 4142
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4143 AGCATCTATCTACCCATCTATCTATCATCTGTGTATAATCTACCTATTATCTATCTATCTACTTATCATCTACT 4216
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4217 TATCATCTACCTATCATCTGTCTATTTTTCTGTCTATCATCTATCTACCATCTATGTATCTACCTATCATCTAG 4290
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4291 CCATCTGTCATCTATCATCTATCACCTATCATCTATCTGTCTCACCTATCATTTATCTATGTATTTGTGTATCA 4364
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4365 TCATCACCCAGCTATGAACTATCTATCATGTATGATGTATCTATCATCTATGTATCTACCTATCTGTTATTTTG 4438
Query 220 ---------------------------------------- 219
Sbjct 4439 GTCAAATATACATAATATAAAACTCACCATTTTAACCATT 4478
