Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NR_148919.1
- Aligned Length:
- 3113
- Identities:
- 187
- Gaps:
- 2898
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAAAGAGAAAATAAGGCATTTGGGATGCCGATGTTAAAAGGAGAAGGTAATCAGAGAAGAAAAAAGGAAGTCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGAGAGTTCTGCGAAGATTTTGAAGATTTCTAGAGAAGCAGGGGGTTCTGGAGAAGGGAATAGACTTGGCCAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATACCCAGGAAGACTTCCTCAACAGATGTCCCATCATGCTGAGATTCAACGCGACATTTTAGAGTCATGCAACC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATGTGAGAAAAAAAGTCCCAGTAACCTTTGTTGGGGCTGGAGGGCAGGATCCCGAGGTCCCGGAGGAGCTGCTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CACCTCCTCCAGCCAGGACAGCGCGTGCCTCAGGACGTCCAGCACCACCTTCTGGAGCCCCGAGACAGGTGGGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCACCTGGAGGTGCTGAAGAAGGTCGACCTCCTTCTTCAGGTCATGGCTGCAACAGGATATTTTCATGCAAGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGCAAAGAGGTGAGATCATGAGGAGCCCAGGCCCTGTGGCCAGAAATAGCCCCTGACGTGACCTTCGAGGAACA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCGTTCTTGACTCTGCCACGAAGCAGGCAGCGCCACGTATTGGCCGCCTTGGGAGGACTCAGTTTTTTTCTTTT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTAAAATTTTTATGTTTTGACAGGTTTTTTTTTAATACTCTAATTTGGACTTTTGATGGTCAAAGCGAACCCCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTTTAGGTCTATGAAACCCCAGAGCCAAAGTACCATCAACAGTTTGGCTGCAATGAGAAGCAAATGTGGCTACT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCTTTTTTCCATTCGTCAGAATTCCTGCCAAGATCAACACACAAGCTGGTCGGAAAGCGTGGTTTCCTGATTTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAAGAGTGCTGACAAGCCAGCATTTGCACAAACTCCCCAAACAGGAGCTGCTGATTTCCAGAGAAAGCAGAAGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CACCGCCTGCTCTGATAAGCCATGTCCCAGGGTGGGGGCCGCAGGGCTGTGGCCAAGTCCTCCCGTCCCTGCTC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTCCAGAGTCAAAAGCAACGGTGTGGAAACCGCCTTTTGTGGCTGGGCCAAAACAAGAAAATGCAAATAAAAAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CAGGAATGTTTCTTTGGTTTCTCTGGAAATAACATAGGGGCTATGAAAACAATTTCTTTTTGGCTGGGGATGCG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGCCGCTCAAAGTCAGTAATTGAAGATGCTCAGGCATCTTTTTTGGACACGCCAAGTTCTCCCGGGAGGCATTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTTTAGGCCCTTTGTTTTTTCTTCTCCAACAAGTTTCTCCAACAAGAGGAAAAAGTGGATAGAAAAGCCAAGCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTTCTGCCCAACTTGCTCCAAAAAAGCTGGGCAATTTCCCAAATAAGCCGCACAAAAATTAGACAAAGAGACCA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TTTGTGGAAAGCGTAAGGAGGGGCCACCTGGCAGCTGTCCAGCGACGTCCTCAGCTTCTCGATGTTCTCGGTGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TCTCCTCCTGCTTGGAGTTGCTCAGCTGGGTCTCTTTCTGGAGGGTCCACTTTTTCTGCTGAAAATTGATGTTG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TCCTCAGTGACCTGGGTAATTTTCTCTATTAACTGGTGAGAAAAAGAAAAAGGAAAAAAAAAAAAAAGATGTAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CATACAGGGGTGGGGGGCCCTGAGGGAAGGGGAATGGGAGAGGGGAGAGATGCAACTTAAGTCCCTGTCTAAGC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ACGGGAGGACAGAGGTCCTGATATGTCTTGGTGATGGCTGTCAAGGGGGACGTTGGTCCTGTCACCAGGGAATG 1702
Query 1 --------------------------------------------------------ATGGAGTCTCATTC-TGT 17
|.|||||.|||.|| |||
Sbjct 1703 AGTCCCAGAATCAGAGATTCTCTTTTCTTTTTTCTTTTCTTTTTTTTTTTTTTGCGACGGAGTTTCACTCTTGT 1776
Query 18 CGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCT 91
.||||||.||||||||.|.|||..||||||||||||||.||||||||.|||||..|.|.|||||||||||||||
Sbjct 1777 TGCCCAGGCTGGAGTGCAATGGTTTGATCTCGGCTCACCGCAACCTCCGCCTCCTGGGTTCAAGCGATTCTCCT 1850
Query 92 GCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGT 165
|||||.|||||.|.||||||||.||||||||||||.|||.||||||||||||||| |||||||||||||.|
Sbjct 1851 GCCTCAGCCTCTGAAGTAGCTGAGATTACAGGCACGCGCCACCATGCCCGGCTAA----TTTTGTATTTTTAAT 1920
Query 166 AGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-------------------- 219
|||||||||||||.||||||||||.|||||||||.|||||||||.|||||.|.|
Sbjct 1921 AGAGATGGGGTTTTACCATGTTGGTCAGGCTGGTTTCGAACTCCCGACCTGAGGTGATCCACCCGCCTCGGCCT 1994
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1995 CTCAAAGTGCTGGCATTACAGGCATGAGCCACCACTCCTTGCCGATCAGAGATTATTTTTATGATCCAAAGGCC 2068
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2069 TGTCTTGTGGCCCTGAGTTTGTTCCAGATTCTTCTGTGTTGTATAGGGATTCAGAACACTGAGCCTGATATTAT 2142
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2143 GGGCTCATAAGCAGCAGGTCAGGTTCTCCCACACCCACTGAGAGCAGCCCACGGCACATTTTCCCATCTGTGCT 2216
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2217 TTGACACAGGGGGCTAGAAAGTGTAGTGGAAGAACAGCAAGGCAATCATTACAGCCAGACATCCACCCTCACTG 2290
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2291 CCACTGTCAACTTTTCTCCTCTGAAGGAACGCGCCAGAACGCACTGGCTGTGGGGAGGCGGCTCCCTTTCTCCC 2364
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2365 AGTGCTAATGGAGGCGAAACATGCATGTCTGGAGACCAGAAGTAAGCCCGAATGGTTTAATTTGATTTTCACAG 2438
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2439 ACACATTTCAAGGGAGTTTTAACTGGCTTTTACTTTAAAAGCCAGGAAATCCCATAAAATCAAAACAAATCTTT 2512
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2513 ATGGTGTAGCAACAGTGTGAAAAATATGCCACCAACAAAAACAGAAACATATGCTCCCAGGGTCTGGAATCCAG 2586
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2587 ATCCACGAAGAAGAAGAAGAGGAAAGTGAAGGAGCCACGTGGCAGGGACGGCAGACTAACCTGTTGGTCGGTGA 2660
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2661 CGGGCTTGTCCCGGAACGGCTTCGCCCGTCCATAGGTGGCCTTGATGACTTGACTTCTGAAGTGCTCCAGCTGC 2734
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2735 AGCAGAGAGGGGGCAACAGTGTCAGGGGGTCAGCAGGGGCCGGCAAGTGGGGGCAGCGTTTCCATGGCAGGGTG 2808
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2809 CGGGAAACACCACTTAGCAGGGTTTGCACGCCTGAATGACCATTCCGCGTTATCAGAATCTTCACCGCTCACGG 2882
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2883 GGAGTGGCGGGACCCACAGAAGAAAAGAGAACAGCAGGCTTTAATTACTTTTTAGGCACGCCTGCCTAACCCGA 2956
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2957 ACGATGCCTGTGGTCAGTGCACACACATGTCTCAAACCCTCAGAAGAGCCTCTTGCTGCCAATTATCCAATGGG 3030
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3031 AAGTCTGGGGCCGGGAGCGCTCTTCCGTAATTGCTAAGTTGGCACCAGACTGTGAAATAAATATTGAGGCTGTC 3104
Query 220 ----- 219
Sbjct 3105 AGTCC 3109
