Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NR_152444.1
- Aligned Length:
- 2390
- Identities:
- 190
- Gaps:
- 2172
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TATTTAAAGGGGAAAGAGGCCGCGGCGCCGGCCCCAGGACCCGACCCGGCCCCAGGAGAGTGTGCTCGTTCTGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCACGGAGCTGGCCGCGTTAGCGACGTCCTCGAGTCCGCGGCGGGCACGATGCAGCTCTTGTGCTCTACTGTGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGAGATCAAGGACATTGGCCACCTGACCCGTTGCACGTTGTAACCGAGGAACTCGGAAGCTACAGCCGAAGGAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGTGGGAGCTGCAGCCTCGCGGGGGCTGATGTCAAGACTACTCTCTCTCAGATCCCAGGATTGGCATGTGATGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAGAGATGAGCCGAAGGCAGGAGGGAACGCCCTGGGAGGTGTTGATGCTGAGTTGGGGAGGCTCCTAGACGAAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCGCCCCCATCTACTGACTGTGCCAGTCTTACATTTTCAGGATGGAGTGGCCAAGGGATGATATAAACAAAGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TACGTTACCGTGGGAAGAAGACAGACTGTTTTCTTAGCTGGGACGTTGGCTTTTGTCCAGGGTGGCTCTGGTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTGGGAGCAACAGGTCCCATTTTAGCAATTCTTTGTCAATGGTTTGAATTTTTTTTTTTTTTAAGATGGAACGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAGAGAAGAGGCTAATTTTCGCGTCATGTTAATCTCACTTCTCTGGCATGTAAGGGTGCTGGTATGCCTGCTGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTCCCCACTCCCAGTTCTGTGTTCCAGAAATTGAGATGGCTCCCTGCCTGTGACTATGATTAGGAGCCTTGCTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CATTTCAGAATCTCCCTTCAACCTGCTAGGGCAGGTATCAGAAATTCCAAAGGGCATTTATGTGAGGCACCTAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTAGAGCCTATCAAAGTAGGAAGGGAGAGCCATTTGAAAGGCATCATATTTCAAACTTTTGCTATTATCTGTGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TATCTTTACAGTCACGGGAACACACTAGCGCTACTGAAAAGATACTTATACAATTTTAAGTGTCTTTAAAATTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GTGTCCCATAATGGGACATCACCTGTTGTATATATGCCATGTATTCTATTTTAGAATCCTGTATCTTATGACCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TAAAGTCATAGTCAAGGACCAGCAGTGTTGGTGTACTGTCAACGGAAGTGCACAGTCTCACTCTAGGATCCCAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCCAGACTTCCTGAATCAGACTCTGGCAGGGTTTTTTGTTTTTTTGTTTTTGTTTTGAGCCAGAGTCTCACTGT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GTCGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAGCCTCCGCCTCCCAGGTTCAAGCGATTCTC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTGCCTCATCCTCCGGAGTAGCTGGGATTACAGGCGCCTGCCACCACACCTGGCTAATTTTTGTATTTTTAGTA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAGATGGGGTTTCGCCATGTTTGTCAGGCTGGTCTCAAAACTCCTGACCTCAGGTGATGGCGCCCACCTTGGCC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TCCCAAAGTGCTGGGATTATAGGAGTGAGCCACCGCGCCGGGCCAGACTCTGGCATTTTAACAATCCCAGGTGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TGTGTGTGCATGTGAAAATTTAAGTACCATTGGTCTAGATCCTACACTCTTTAGGATATCACCATCTGTAGGTA 1554
Query 1 ----------------------------------------------------------------------ATGG 4
||||
Sbjct 1555 GAATATTTAAAGCATAATAGGTATGACTGATAGATTATTTTATCCAAAGTTCTTTTTTTTTTTTTTTGAGATGG 1628
Query 5 AGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTC 78
|||||...|||||.|||||||||||||||.||||||.|||||||||||||||||||.|||||||||..|.|.||
Sbjct 1629 AGTCTTGCTCTGTTGCCCAGACTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAAGCTCTGCCTCCTGGGTTC 1702
Query 79 AAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTT 152
|.||.|||||||||||||.||||||..||||||||||..|||||||||.|.|.||||.|||.|||||| |||||
Sbjct 1703 ACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGGCTACAGGCACCCACCACCACGCCTGGCTAA-TTTTT 1775
Query 153 TTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------- 219
||||||||||||||||||||||||||||||.||||.||||||.|||||||||.||||||||||||.|
Sbjct 1776 TTGTATTTTTAGTAGAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCGCC 1849
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1850 TGCCTCGGCCTCCCAAAGTGCTAGGATTACAGGCGTGAGCCACCACGCCCGGCCCCAAAGTTCTAAAGTAACAT 1923
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1924 TCTATTGCTAAAGAAATCCTAACCTACTATGTAACATTTTTCTCTTAGTTAAAAATGTGAACTTATTATTAACC 1997
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1998 TCAATTTTTTAGAGGCCTCCAATCTTTTTAAAATATAAATATTTTTGATTGACAAATCATAATTATACACTTAT 2071
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2072 GGGGGTATAAACCTCAATTTTTGTAACCCTATTTTGGCATTTTCCTGTCCTTACATCTCAGCTTAAATGCTCCC 2145
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2146 TCTTTTGGGAGGCCTTTTTCTGCCTTCAACATAGTAGAGCCTTTTCCCCCACCCCTCTGTAACATAATGCCCTG 2219
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2220 TTTTATTTTTACTGCTTTTATTTTCATGCTTTGTGGGTGTCCCCACTGGAGTGTAAGCCCTATGGGAGCAAGGG 2293
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2294 CTGACCTGTGACTGTTTTATCTCCAGGGCCAACAGCAGTGTTACTGTATAGTATGTACTCAATAAATATTTGTT 2367
Query 220 ---------------------- 219
Sbjct 2368 GGCTTTATCTCTTATTTTTTAA 2389
