Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NR_152721.1
- Aligned Length:
- 3618
- Identities:
- 189
- Gaps:
- 3406
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTCACGTCCTTTTGAAGACGCCCCCGAGGGCGCTGCCCAGCAGGAGGCAGAGCTGCTGCGAGAAGAAGACCCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAGATCTGGGGCAGCGAGCTGTGCGTCTGACAGCGCAGGTCCAGCAGCGTGGGCCCCAGGAAGGCGATGCACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCCGAAGCTGAAGAAGACGCTCCAGTAGGGTCTGGCTCTGTAACCCAGGCTTGAATGCAGTGGCATGATGGGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCAATCTTGTTACCTGTTACTGGTCTCTTCAGGTTTTCTTTTTGGCTCAATCTTGAGATGGAGGCTCGTTTTGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCACAATCATCATACACTGTAGCCTAGAACTCCTGGCCTCAA 370
Query 1 ------------------------------------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGT 32
||||||||||..|||||.||||||.||.||||
Sbjct 371 GCGATTTTCCTGTCTCAGCCTACAAAGTTGCTGGAACTCTAGATGGAGTCTCTCTCTGTTGCCCAGGCTAGAGT 444
Query 33 GAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGA 106
|.|||||.|.|||||.||||||||||||||||||||||.||.|.||||||.|||||||||||||.||||||.||
Sbjct 445 GCAGTGGAACGATCTTGGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGA 518
Query 107 GTAGCTGGGATTACAGGCACACGCAACCAT---GCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTT 177
.|||||||||||||| .||..|| ||||| |.||.||||| |||||||||||||||||.||||||||||
Sbjct 519 ATAGCTGGGATTACA--TACGTGC-ACCATCACGTCCAGCTAA---TTTTTGTATTTTTAGTACAGATGGGGTT 586
Query 178 TCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-------------------------------- 219
|||||||||||||||||||||||| |||||||.|||||||||
Sbjct 587 TCACCATGTTGGCCAGGCTGGTCT-GAACTCCAGACCTCAAGTGATCCACATGCCTTGGCCTCCCAAAGTGCTG 659
Query 220 -------------------------------------------------------------------------- 219
Sbjct 660 GAATTACAGGTGTGAACCACCATGCCCAACCTAGCCAGCCTGATTTTTTAATATTTGTTGGGATTTATTTTGTG 733
Query 220 -------------------------------------------------------------------------- 219
Sbjct 734 GCCTAACATATGCTCTATCTTGGAAAATGTTCCATGCATATACATTAACTTTAATCTTCACAATGGTCCTGTGA 807
Query 220 -------------------------------------------------------------------------- 219
Sbjct 808 GGTAGATATTATTATCCCTATTTTATGGATAAGAAAACTGAGGCTCAGGAAGGCAGAGTAACTTGCCTAAAGTC 881
Query 220 -------------------------------------------------------------------------- 219
Sbjct 882 ACACAGCATAAGTAGCAAAGCTGAGTTTTGAGCCTGCGTTGCCTGACTCCAAAGTCTGGATCCTTCCCATGAGA 955
Query 220 -------------------------------------------------------------------------- 219
Sbjct 956 ATGTCTGCCTCTCACATTCAACTCCAATACACACATCTAAGACTAGTGCATAAGCTGATAGCTGTTAACATTTT 1029
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1030 CCCCCACAGAAAATGCAGCTGAACCAAGCCTGCCTATCTTGTCTATGAGCAGCTGATTCTTTGAATCTAAAGAA 1103
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1104 TTGATACAGGACTTGATACATGTGGAATAACAGAAAGAACCTGGACCGTGGAGTGAGACAGGCTTAGACTTGAG 1177
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1178 TTCTGGCTACACACTTGGCTGTGCCAACTCAAGGCGGCTACCTTGACATTATAAGGCTGATTTTCTTCAACTGT 1251
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1252 AAAATGTCGATGTAGGATTACATGATAACACATGCAAAGCCTCTGGTAGAACACTCAGGGCAGCACTGCTCATG 1325
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1326 CTTCTTAGTTGCCTTCCCCTGATCTGGAGTGTCAATTAATCTTGGTTTGAGTTCCTCTTGCCCACCAGTGCACT 1399
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1400 TTGGTCCCCCATTCAGTCATGTAGCAAGGGGCTATTCCTCCAGCTGTTCTTGAGTAAGCATGGCACCTCACATT 1473
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1474 CATATAGAATGGTTACTAATAGTCATCCAAGTTATTGAGAAAAATATTGACCACAATGTACCACTCTCCCACTC 1547
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1548 CACTTTTTCCTAATTAATCTTTCCTTTGGGACTCAGCTAAGTTGTTCATTCTGCTGGGAGTGCTCCACCCACCC 1621
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1622 AGAGCTGCCCCGAGTGCCTGCCTTGTGTTCTCTGCATCCCCTCACCACCTTCCTTTGTGACAAGCAGCTGAGGT 1695
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1696 GTCTGTAACCCGAATCAATACTGGATCAGCTCCTTGAAGATAGAGATTGGGTCACACAATTATCCTTATATCTT 1769
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1770 AGAGCACAGCACCTGCCTGGTACATAGCTGGCATTCAGAAAATATTAGCTACGCAAAAATGTGTTTAAGTATTA 1843
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1844 TAACCTTGAGTTGATGAAACTCTGAGGCAAGAAATAGTATTTATAGAGGATTTCATGAAAAATGTACAATTTAT 1917
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1918 CGATCTCATCAGTTCTCAGATTTGGCTATATATTAAAATCCCCTGGAAACATAGAAAAAATCAGAATCTCTGGT 1991
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1992 TGGTGGAGTCCTGTGTTGGTATTTTGCAAAAGTTCCCAGGACTTCCTAATGTGCAGCTAGGGTTGGAAACCACT 2065
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2066 GCTCCAGAAAATCCACATTTTACCACTGAAGAACTGCCTGCATATCCTGTACCATTTAGGCCCTGCACTAAAGT 2139
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2140 GCCTTTATTGAATTATACTTGGGCTTTGTGTCCAATTTGACTGAACCTGGGATATAACTGTGCGACTCTTGTCA 2213
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2214 CCGGAGATATGGGGAGATGTTGTTGTCAATGGATCCTCTTTATGAAGACACACCAGAGAGATGCCTATTGGGCA 2287
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2288 TCAGCACCAAAAAAAGGCCATGATCCTCCTGAGCAACCAGTTCATGTTTGTCTTACGGATTCCAGGAATCATTT 2361
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2362 AATTAACACTATTTTCCAGGTTTGTAGTAGCTGCTGCAAAGCTCAAGATCAAAGCCATGGTGCATCTTTATCAC 2435
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2436 CTACAAAGAATTTTGTGGTGTGTGTGTTACATATTGACTTGGTTCTGCATTATTTTTTGTCTTTTTCTCTTCAC 2509
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2510 CCTCTGATATGGTTTAGGTCTGTGTCCCTACCCAAATCTCATGTCAAATTATAATTCTCAATGTTGGAGGAGGG 2583
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2584 GCCTGGTGGGAGGTGATTGGATCATGGGGGCAGACATCCCCCTTGCTGTTCTCTCAATAATGAGTTTTTATGAG 2657
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2658 ATCTGGTCGTTTGAAAGTGTGTAGCACCTCCTCCTTTGCTCTCTTTTTCCTGCTGGCCATGTGAAGATGTGCCT 2731
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2732 GCTTCCCCTTCGCCTTCCGCCATGATTGTAAGTTTTCTGAGGCCTCTCCAGAAGCAGAAGCCTGTATAGCCCAC 2805
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2806 AGAACTATGAGTCAATTAAACCTCTTTTCTTTATAAATTACCCAGTCTCAAGTATGTCTTTATATCAGTGTGAG 2879
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2880 AATGTATGAATACACCCTCCTTTCCTTAACTTTTTCTATAATAAAGCTTTTTAATTGAGATAATTCACATATCA 2953
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2954 TAATATTCGCCCTTTTAAAGTGTACAATCCAGTGGTTTTTAGTGTATTTACAAGATTGTGTGACCATCACTACT 3027
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3028 AATTCCAGACCATTTCCATCACCCCAAAAATAAACTCCACACCCATTAGCAGTCACTTCTCACTCTCTCTTCCC 3101
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3102 CTCGACTTACTTTCTGTCTTTATGGATTTGCCTGTTCTAGATATTTCATATCTAGATATTTCATATAAATGGAA 3175
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3176 TCATACAATATGTGGCTTTCTGTGTCTGGTTTCCTGTACTTAGCATAATGTTTTCAAGGTTCATCCATGGTATC 3249
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3250 AGTAGTTTATTCCTTTTTTATGGCTGAATAGTATTCTATTGTATGGACATACCACATTTTGTTTATACATTCAT 3323
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3324 CAGCTGTTGGACATTTGGGTTTCTACTTTTTGGCTATTATGAATTATGCTGCTGAGAATATTCATGCACAAGTT 3397
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3398 TTTATGTGAATATGTTTTAGTTCTCTTGGGTACATATTAGAAGGGTGGTTTGCTGTGTCAGATAGTAACTCTGT 3471
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3472 GTTTAACTTTTTGAGACCCTTTCCTCATTTAAAGAAATGTTTTTGTCTTATAGTATAGTATGTATCTCTGTAAG 3545
Query 220 ------------------------------------------------------------------ 219
Sbjct 3546 CCACTACAGATTCCTCTTTTTGGAATGAGGTGGCATATAAATAAATAAATAAAAAGTCACAAAGCA 3611
