Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12783
Subject:
NR_152721.1
Aligned Length:
3618
Identities:
189
Gaps:
3406

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACTCACGTCCTTTTGAAGACGCCCCCGAGGGCGCTGCCCAGCAGGAGGCAGAGCTGCTGCGAGAAGAAGACCCA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGAGATCTGGGGCAGCGAGCTGTGCGTCTGACAGCGCAGGTCCAGCAGCGTGGGCCCCAGGAAGGCGATGCACA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGCCGAAGCTGAAGAAGACGCTCCAGTAGGGTCTGGCTCTGTAACCCAGGCTTGAATGCAGTGGCATGATGGGT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCAATCTTGTTACCTGTTACTGGTCTCTTCAGGTTTTCTTTTTGGCTCAATCTTGAGATGGAGGCTCGTTTTGT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCACAATCATCATACACTGTAGCCTAGAACTCCTGGCCTCAA  370

Query    1  ------------------------------------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGT  32
                                                      ||||||||||..|||||.||||||.||.||||
Sbjct  371  GCGATTTTCCTGTCTCAGCCTACAAAGTTGCTGGAACTCTAGATGGAGTCTCTCTCTGTTGCCCAGGCTAGAGT  444

Query   33  GAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGA  106
            |.|||||.|.|||||.||||||||||||||||||||||.||.|.||||||.|||||||||||||.||||||.||
Sbjct  445  GCAGTGGAACGATCTTGGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGA  518

Query  107  GTAGCTGGGATTACAGGCACACGCAACCAT---GCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTT  177
            .||||||||||||||  .||..|| |||||   |.||.|||||   |||||||||||||||||.||||||||||
Sbjct  519  ATAGCTGGGATTACA--TACGTGC-ACCATCACGTCCAGCTAA---TTTTTGTATTTTTAGTACAGATGGGGTT  586

Query  178  TCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG--------------------------------  219
            |||||||||||||||||||||||| |||||||.|||||||||                                
Sbjct  587  TCACCATGTTGGCCAGGCTGGTCT-GAACTCCAGACCTCAAGTGATCCACATGCCTTGGCCTCCCAAAGTGCTG  659

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  660  GAATTACAGGTGTGAACCACCATGCCCAACCTAGCCAGCCTGATTTTTTAATATTTGTTGGGATTTATTTTGTG  733

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  734  GCCTAACATATGCTCTATCTTGGAAAATGTTCCATGCATATACATTAACTTTAATCTTCACAATGGTCCTGTGA  807

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  808  GGTAGATATTATTATCCCTATTTTATGGATAAGAAAACTGAGGCTCAGGAAGGCAGAGTAACTTGCCTAAAGTC  881

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  882  ACACAGCATAAGTAGCAAAGCTGAGTTTTGAGCCTGCGTTGCCTGACTCCAAAGTCTGGATCCTTCCCATGAGA  955

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  956  ATGTCTGCCTCTCACATTCAACTCCAATACACACATCTAAGACTAGTGCATAAGCTGATAGCTGTTAACATTTT  1029

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1030  CCCCCACAGAAAATGCAGCTGAACCAAGCCTGCCTATCTTGTCTATGAGCAGCTGATTCTTTGAATCTAAAGAA  1103

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1104  TTGATACAGGACTTGATACATGTGGAATAACAGAAAGAACCTGGACCGTGGAGTGAGACAGGCTTAGACTTGAG  1177

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1178  TTCTGGCTACACACTTGGCTGTGCCAACTCAAGGCGGCTACCTTGACATTATAAGGCTGATTTTCTTCAACTGT  1251

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1252  AAAATGTCGATGTAGGATTACATGATAACACATGCAAAGCCTCTGGTAGAACACTCAGGGCAGCACTGCTCATG  1325

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1326  CTTCTTAGTTGCCTTCCCCTGATCTGGAGTGTCAATTAATCTTGGTTTGAGTTCCTCTTGCCCACCAGTGCACT  1399

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1400  TTGGTCCCCCATTCAGTCATGTAGCAAGGGGCTATTCCTCCAGCTGTTCTTGAGTAAGCATGGCACCTCACATT  1473

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1474  CATATAGAATGGTTACTAATAGTCATCCAAGTTATTGAGAAAAATATTGACCACAATGTACCACTCTCCCACTC  1547

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1548  CACTTTTTCCTAATTAATCTTTCCTTTGGGACTCAGCTAAGTTGTTCATTCTGCTGGGAGTGCTCCACCCACCC  1621

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1622  AGAGCTGCCCCGAGTGCCTGCCTTGTGTTCTCTGCATCCCCTCACCACCTTCCTTTGTGACAAGCAGCTGAGGT  1695

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1696  GTCTGTAACCCGAATCAATACTGGATCAGCTCCTTGAAGATAGAGATTGGGTCACACAATTATCCTTATATCTT  1769

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1770  AGAGCACAGCACCTGCCTGGTACATAGCTGGCATTCAGAAAATATTAGCTACGCAAAAATGTGTTTAAGTATTA  1843

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1844  TAACCTTGAGTTGATGAAACTCTGAGGCAAGAAATAGTATTTATAGAGGATTTCATGAAAAATGTACAATTTAT  1917

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1918  CGATCTCATCAGTTCTCAGATTTGGCTATATATTAAAATCCCCTGGAAACATAGAAAAAATCAGAATCTCTGGT  1991

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1992  TGGTGGAGTCCTGTGTTGGTATTTTGCAAAAGTTCCCAGGACTTCCTAATGTGCAGCTAGGGTTGGAAACCACT  2065

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2066  GCTCCAGAAAATCCACATTTTACCACTGAAGAACTGCCTGCATATCCTGTACCATTTAGGCCCTGCACTAAAGT  2139

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2140  GCCTTTATTGAATTATACTTGGGCTTTGTGTCCAATTTGACTGAACCTGGGATATAACTGTGCGACTCTTGTCA  2213

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2214  CCGGAGATATGGGGAGATGTTGTTGTCAATGGATCCTCTTTATGAAGACACACCAGAGAGATGCCTATTGGGCA  2287

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2288  TCAGCACCAAAAAAAGGCCATGATCCTCCTGAGCAACCAGTTCATGTTTGTCTTACGGATTCCAGGAATCATTT  2361

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2362  AATTAACACTATTTTCCAGGTTTGTAGTAGCTGCTGCAAAGCTCAAGATCAAAGCCATGGTGCATCTTTATCAC  2435

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2436  CTACAAAGAATTTTGTGGTGTGTGTGTTACATATTGACTTGGTTCTGCATTATTTTTTGTCTTTTTCTCTTCAC  2509

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2510  CCTCTGATATGGTTTAGGTCTGTGTCCCTACCCAAATCTCATGTCAAATTATAATTCTCAATGTTGGAGGAGGG  2583

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2584  GCCTGGTGGGAGGTGATTGGATCATGGGGGCAGACATCCCCCTTGCTGTTCTCTCAATAATGAGTTTTTATGAG  2657

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2658  ATCTGGTCGTTTGAAAGTGTGTAGCACCTCCTCCTTTGCTCTCTTTTTCCTGCTGGCCATGTGAAGATGTGCCT  2731

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2732  GCTTCCCCTTCGCCTTCCGCCATGATTGTAAGTTTTCTGAGGCCTCTCCAGAAGCAGAAGCCTGTATAGCCCAC  2805

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2806  AGAACTATGAGTCAATTAAACCTCTTTTCTTTATAAATTACCCAGTCTCAAGTATGTCTTTATATCAGTGTGAG  2879

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2880  AATGTATGAATACACCCTCCTTTCCTTAACTTTTTCTATAATAAAGCTTTTTAATTGAGATAATTCACATATCA  2953

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2954  TAATATTCGCCCTTTTAAAGTGTACAATCCAGTGGTTTTTAGTGTATTTACAAGATTGTGTGACCATCACTACT  3027

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3028  AATTCCAGACCATTTCCATCACCCCAAAAATAAACTCCACACCCATTAGCAGTCACTTCTCACTCTCTCTTCCC  3101

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3102  CTCGACTTACTTTCTGTCTTTATGGATTTGCCTGTTCTAGATATTTCATATCTAGATATTTCATATAAATGGAA  3175

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3176  TCATACAATATGTGGCTTTCTGTGTCTGGTTTCCTGTACTTAGCATAATGTTTTCAAGGTTCATCCATGGTATC  3249

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3250  AGTAGTTTATTCCTTTTTTATGGCTGAATAGTATTCTATTGTATGGACATACCACATTTTGTTTATACATTCAT  3323

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3324  CAGCTGTTGGACATTTGGGTTTCTACTTTTTGGCTATTATGAATTATGCTGCTGAGAATATTCATGCACAAGTT  3397

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3398  TTTATGTGAATATGTTTTAGTTCTCTTGGGTACATATTAGAAGGGTGGTTTGCTGTGTCAGATAGTAACTCTGT  3471

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3472  GTTTAACTTTTTGAGACCCTTTCCTCATTTAAAGAAATGTTTTTGTCTTATAGTATAGTATGTATCTCTGTAAG  3545

Query  220  ------------------------------------------------------------------  219
                                                                              
Sbjct 3546  CCACTACAGATTCCTCTTTTTGGAATGAGGTGGCATATAAATAAATAAATAAAAAGTCACAAAGCA  3611

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