Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NR_156699.2
- Aligned Length:
- 3490
- Identities:
- 187
- Gaps:
- 3277
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGCGCGAGCCTGCGTTTTCCGGCCAGAGGACATGATGCAGGGGGAGGCACACCCTAGTGCTTCCCTTATTGACA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAACCATCAAGATGAGAAAAGAAACAGAGGCTAGGAAAGTGGTCTTAGCCTGGGGACTCCTAAATGTATCTATG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCTGGAATGATATATACTGAAATGACTGGAAAATTGATTAGTTCATACTACAATGTGACATACTGGCCCCTCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTATATTGAGCTTGCCCTTGCATCTCTCTTCAGCCTTAATGCCTTATTTGATTTTTGGAGATATTTCAAATATA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTGTGGCACCAACAAGTCTGGTTGTTAGTCCTGGACAGCAAACACTTTTAGGGTTGAAAACAGCTGTTGTACAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACTACGCCTCCACATGATCTGGCAGCAACCCAAATCCCTCCCGCTCCACCTTCCCCTTCAATTCAGGGTCAGAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGTGTTGAGTTATAGCCCTTCTCGTTCGCCCAGTACCAGTCCCAAGTTCACCACCAGCTGTATGACTGGTTACA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCCCTCAGCTGCAAGGTCTGTCCTCAGGTGGCAGTGGTTCTTATAGCCCTGGAGTGACCTACTCGCCCGTCAGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGTTATAATAAGTTGGCGAGCTTTAGCCCCTCTCCTCCTTCTCCGTACCCTACCACTGTTGGACCAGTGGAGAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAGTGGATTGAGATCTCGCTACCGTTCTTCACCTACCGTCTACAACTCACCTACTGACAAAGAAGACTACATGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCGACCTACGAACTTTGGATACTTTTCTCAGAAGTGAAGAGGAGAAACAGCATAGGGTTAAGCTGGGGAGCCCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GATTCTACCTCTCCTTCCAGCAGTCCTACTTTCTGGAACTATAGTCGTTCTATGGGGGATTATGCACAAACTTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AAAGAAGTTTCAGTATCAGCTTGCCTGTAGGTCTCAGGCCCCATGTGCTAACAAAGATGAAGCCGATCTCAGCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTAAACAAGCCGCAGAAGAGGTCTGGGCAAGAGTGGCTATGAATAGACAACTTCTTGATCATATGGATTCATGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACAGCTAAATTTAGAAATTGGATCAATGAGACAATATTAGTGCCACTTGTTCAAGAGATTGAGTCTGTCAGCAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACAGATGAGACGAATGGGTTGTCCAGAGCTACAGATAGGAGAGGCTAGTATTACTAGCTTGAAACAAGCTGCCC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGGTTAAAGCGCCTCTCATTCCGACTTTGAACACAATCGTTCAGTATCTAGACCTTACTCCAAATCAGGAATAC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTGTTTGAAAGGATCAAAGCTTTTAAAAATTTCACCTTGTTGCCACAGAACTATCTCAGGGAGGTTGTATGAGC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TCATTTCGATGGAACAGAGGTGGCGACTTCAAAGGACGAAAGTGGGATACAGACCTGCCCACCGATTCTGCTAT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CATCATGCATGTATTTTGCACCTACCTTGATTCCAGATTACCTCCACATCCGAAGTATCCCGACGGAAAAACTT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTACTTCTCAGCACTTTGTTCAGACACCAAATAAACCAGATGTTACAAATGAGAATGTTTTTTGCATTTATCAG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGTGCTATCAACCCTCCCCATTATGAGCTCATCTACCAGCGTCATGTATACAACCTGCCAAAGGGCAGAAATAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TATGTTTCATACATTGTTGATGTTTCTCTACATCATAAAGACCAAAGAGTCAGGAATGCTTGGGAGAGTTAATC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TTGGTCTATCTGGTGTGAATATATTGTGGATCTTTGGCGAGTAGCAAGTCATATATTTAATTCTGACATTTAGA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTATTTCACTGAACCAGAAGTCGAAACTAAACATCTCTGAGCCACTGACTCTTCTGAAATAAAATACACATGGG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGTATGTTACAGACTCTTTAGATTTAACAGAAAATGTAGCTGTTATGAAATGTAATTGTAAAAATATGTCCCGT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ATCTTCTATATCGAGACATTGCCTTTAATTTTATATCGCTTTTCAGAAATTTCAGTTGACTACAAAACTGCAAC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CCTTCGGATTTTTATTGACTCAAAATAGTGCCATTCCCCTTAATGAAATAGATTTTGAGTCTTTTTTTCATTGT 2072
Query 1 -----------------------------------------------------------------------ATG 3
|..
Sbjct 2073 AACCCCCAAATGAGAATCATCTACCTGATTCTTGTACCAAAAAAAAATTTTTTTCAGTCTTTTTTTTTTTTAGA 2146
Query 4 GAGTCTCATTCTGTC-GCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG 76
|||..|| |||||| .|.||||||||||||.|||||||.|||||..|||||||.||||.|||||||| |.|||
Sbjct 2147 GAGGGTC--TCTGTCAACGCAGACTGGAGTGCAGTGGCACGATCTTAGCTCACTACAACTTCTGCCTC-CCAGG 2217
Query 77 -TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTT 149
||||||.|||||||||||||.||||||.|||||||||||||||||||||..|.|.||||.||||.|||||
Sbjct 2218 CTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGCACCACCACGCCCAGCTAA--- 2288
Query 150 TTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG---- 219
|||||||||||||||||||||..||||||||||||||||||||||||||||.||||||||||||||||.|
Sbjct 2289 TTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCCCGAACTCCTGACCTCAGGTGAT 2362
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2363 CCACCCACCTCGGCCTCCCAAAGTGCTGGGATTATAGGTGCGAGCCACTGCGCCCAGCCTCAGTTATTTTATTT 2436
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2437 AACAGTGTAAGTACTTAGAAAGTAAGAAAATTGCTGATTTAGTTTTTTTTTTTTTTTTTTTAATGTTTCCCCAG 2510
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2511 CATTCTGCAAGTTAGGCCAAAGCCCACATTCAAAGAAATGAGATTAACTCTTAAGTAATGTATTAAGTTTATGT 2584
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2585 ATATTTTAAAATATTATTAAAGGAGGTTTGAAAGTATTGACATTTAAAAAGTCAACACTTAGATTAAATTTAGC 2658
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2659 TGGTAGTTTTAATTTGGGTTTTAGTTAAGAGTGTGAGGACATCAGGAAAACTGTTTACTACTTTGGTTTTAGCA 2732
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2733 GCTCAGTTTTACTATTCCATAATGTGTTATTTTTAAAGTTCTCTTTTTAAGATCACAGTGATATCCTATCTTCA 2806
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2807 AATTTTTTAAATATGTTCAAAATATCTGGAGGGTGAGAAGTTACCAAGTTTGTATGTTTTGTTTGACTCACCAT 2880
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2881 CTTTATTTTCTGTATATGTAGTAGCTGGCAATTGCATATATTTTCTTGATTAACATATTAGAGACTGCTTCCAT 2954
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2955 CATCTTATGTAAACCTGGAAACAGCTGAAACTAGTCTTTTCTGAAGAACCGTGTATCAGTGTTAGATGTGCATC 3028
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3029 CCGTTTTGTCATTCCCTCAGACTTTGAATACAGTCATTACTCTCTGGAAGAGAAATGTAAGTATATTTTTTGTT 3102
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3103 ATCTGCAGTATGGTTTAACATGTATTAATAATACACATATGCAGACTCACTAAAGTATCCCCAGTAATTAGTAA 3176
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3177 ATTCCAAATTTAAGTCAGTACAGTTCTGTATTTGTAAATTCTGTCTTTCAAAAAGTTGTTCGTGTTTTTAAAAG 3250
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3251 TTGATGTCCAAAGGAAAGGAGCTTCTTTTAAGTACTTTTGGTGTATGTTGAATATTTATTTGCTATGATATTCT 3324
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3325 AGAAGAAAATATCAAACATGTTAAATATAAGAACATGTTAAAATTTAAATTTGCTATTTCAAAAGTTACTGAAG 3398
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3399 ATGTCTTGGAATAACAATTGTCATGCTGTTAAACTAGTTGCATATACTTCATTAAAAGCACCATGGAGAAACAT 3472
Query 220 ------------ 219
Sbjct 3473 TTTAACAATGCA 3484
