Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NR_157409.2
- Aligned Length:
- 3928
- Identities:
- 189
- Gaps:
- 3712
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTGACAGAAGCGTCAATTCCTGGGAGTAGTTCGTTGGTTTTCTTTCCCCTCATCCTTTTGCCTGCTCCCGGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGGGTGGCTTTGATTTCGGCGATGAGCTCCCAGAAAGGCAACGTGGCTCGTTCCAGACCTCAGAAGCACCAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATACGTTTAGCTTCAAAAATGACAAGTTCGATAAAAGTGTGCAGACCAAGAAAATTAATGCAAAACTTCATGAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGAGTATGTCAGCGCTGTAAAGAAGTTCTTGAGTGGCGTGTAAAATACAGCAAATACAAACCATTATCAAAACC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TAAAAAGTGTGTTAAATGTTTACAAAAGACAGTGAAGGATTCTTATCACATAATGTGCAGGCCATGTGCCTGTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AACTTGAAGTTTGCGCAAAATGTGGAAAGAAAGAAGACATTGTTATTCCGAGTTGGAAGCTTTAGAAGGAGTTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAACTCAGGAGTCACTGTCCCTTGAGTGAGACCCCACCTGTATGGAGGAGCTGGTGATTCTATATCTGCACTTA 518
Query 1 -----ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCT 69
||||||||||..|||||.||||||.||||||||.|||||||.|||||.|||||||..|||||||.||||
Sbjct 519 ACATTATGGAGTCTCCCTCTGTTGCCCAGGCTGGAGTGCAGTGGCAGGATCTTGGCTCACCACAACCTCCGCCT 592
Query 70 CTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGC 143
|.|..|.|||||.||||||||||||||.|||||..||||||||||||.|||||||.|||.|.|||||||||.||
Sbjct 593 CCCTTGTTCAAGTGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGACTACAGGCGCACACCACCATGCCCAGC 666
Query 144 TAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCA 217
||| |.||||||||||||||||||||||||||||||.|||||||||||||.|||||||||||||||||||||
Sbjct 667 TAA---TCTTTGTATTTTTAGTAGAGATGGGGTTTCACTATGTTGGCCAGGCCGGTCTCGAACTCCTGACCTCA 737
Query 218 AG------------------------------------------------------------------------ 219
.|
Sbjct 738 TGATCTGCCTGCCTCAACCTCCCAAAGTGCTGGAATTACAGGTGTGAGCCATCATGCCTGGCCTAATTTGTATA 811
Query 220 -------------------------------------------------------------------------- 219
Sbjct 812 TTTCTAATGACTCATGATGTTGACTGAGCATCTTTTCTTTTCTTTTCTTTTTTTTTTTCCTTGTTTTTTGAGAT 885
Query 220 -------------------------------------------------------------------------- 219
Sbjct 886 GGAGTCTTGCTCTATAGCCCGGGCTGGAGTGCAGTGGCACCATTTCAGCTCAATGCAACCTCTGCCTCCTAGGT 959
Query 220 -------------------------------------------------------------------------- 219
Sbjct 960 TCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCACACACCACCATGCCCAGCTAATTTT 1033
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1034 TGTATTTTTAGTAGAAACAGGTTTTCACAATGTTGGCCAGGATGGTCTCCATCTACTGACCTTGTGATCCGCCC 1107
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1108 CCCTAGGCCTCCCAAAGTGCTGGGCTTACAGGCATGAGCCACTGCACCCAGCCGACTGAACATCTTTTCATGTG 1181
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1182 TTTATTAGCCAATCCTATATCTTCACTGGTGAAATGTCTATTCAGATGTGTTGCCCATTTTAAAAATTGGGTTG 1255
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1256 TTTTCTTACCATTGAGTTATGAGTCTTTTATATATATTCTAGATACAAGTCCTTTATCAGATATAATTTGGAAA 1329
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1330 TATTTTCTCGCTGTCTGTAATGTGTTATACATCAATTTTGAGATATCCTTCACATTAAGAAACTAACGGTGTGG 1403
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1404 ATAATAATCCTGGTATTGACAGAGGTTTGGACTCCTGAAGCCTGAAAGTCTATCTGCTGCCACGCCTGGGCACA 1477
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1478 TACTGCATCATTTACAAAACTGTAGAGCACCTGTTGTGTGTGCAGTTGTGATTTCTTATAGATTTTTAGAATTG 1551
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1552 GAAGGCATGTAAAGAACACGTAATCTGGTACATTGCTTCAGTAGGTAAGTCAGTATGAACTTCTAAGAATTTTT 1625
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1626 GTTTTCTTCTGTATTGGGTCTATTGTGGGTATGTCCAACGTGACAGGGGAGGTAAGGGAAGTGGCATCCCCTGA 1699
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1700 GATAGTGACTGAAATGGCTTTCATCATCTTTAAGTCAAAGTGAGATGCCAGTAATAGGATATATGTATGTATGT 1773
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1774 ACTTGTGTCTCTGTATGTATGTAAATAAACAAACATGCTGGAAGGAGGAGGTGATTCAATCAGGGACTTTGTGA 1847
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1848 AAGAAAAAAAGAATAACTGGACCTTCCTTTAATGATGAAAACTGTTTATACAGCAAACCATCAAAGCCAAAATG 1921
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1922 TGAATTTTGGTATTAGCCCGATTTTTCCTAAGAAACTGTTGATGTAACCACTGTAGTTGCAGAGATCGTTTTGG 1995
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1996 TATATTCTAGACCCTCTTTGTTTTGTTCTGTTTGGGGTTTCTTCCCCCTCAAGTTGCTCTTGTCCACCACTAGA 2069
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2070 CTGGCTGCCTTTTATTCCATAGCAGACAGTCCTTAAGTCTTTGCATATGTCCTTATTCAAAAATTAATCTTCAT 2143
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2144 CAGTTTTTTTCTGCAGAAAACAGTTTTTTAAATATCTTACATGAGAATGCTCTGCACCTGCAATCTCTGGTTGA 2217
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2218 TGCAGTTTCCTTTCTCTCTTCTCTGTTCCCATTGGTAGAATAAATCTGCTCCTTCTTAAATCCTGAGCTGAAAA 2291
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2292 TGTCCACACTTCCCAGAAGTGTACTTTAGAATCACCTGTAACATGTATTTAAAATACAGATTCCCCAGCTCCAC 2365
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2366 GGGCAAAGCTCTCCTGCCATGTGACACCCTGATACAGTTCAGGGAGCCACTAAGGCAGGCCAAAATGGCTCAGC 2439
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2440 AGGCAAAGGTCCAAGCTGCCAGGGTAGTGTGTCATTACAGCATGCTTAGCATAGCTAGGAGGACAGGCTCACAC 2513
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2514 CCAGCCCCACAGCTGTTGCGCTACAGACTCAGGCACAGGGCTGTCTAACTGGCAGATGTGGGCCACAACTGTTG 2587
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2588 GAGACAAGCCAGCCATATTTGGGAAAATCTTATTGTAAGGGGCAAGTGTGAGTGAGATTTAGGAGTCATGGGAA 2661
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2662 AATACACCAACACAGTAAATCTTGTGTTATAGGAGAGATGTGGAAGAAAGAGATAAACTACTGGCCAGGGTGTC 2735
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2736 TCCTGACTGGGTGACTTGCCACCACATGGGCCAGGCAGGTTGCGGCAGCTCTGCCTTTGGGAGGTGGCTGGAGG 2809
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2810 AGGGGAGGAGAGAGAGGCATGATGAAGACAGATGCACCCTTTCCTGAGCAGGGGTTAACATTCAGGGTGCCGAA 2883
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2884 AGGAATTCCACAGCCTGTTTCCCATCTCTCTTGTCCTCATCAAGTACTGGTCCTCGTGTATGTGTTCTGCTTCC 2957
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2958 GCTTTCTCAGGATGTTTACGTTTTTGCAAATACGTTTATGGAAAAGAGTTACCTCACCCACCTCTCCAAACATC 3031
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3032 TATTTGTTTTACATTTTTATTGCGGGGGAGTGATCTCTTTACATAGCTTCAAATGGCATAACATTCAGCAGTAT 3105
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3106 CCAAGCTTAGATATATCTGATGAGAGGAAAGTAATTGTGAGGCCTTTGTTCTAGTTACAACTTTGTCACTATCT 3179
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3180 GACTCCATGACTCCAGCAAATTGCTTCAACTGTCTGGCCTGCAGTTTTTTTCTTGCGTTAAATAACAGACTTAG 3253
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3254 TCTAGATCGGTGGTTCTTATCATGTGGTTTCTGGACTAGCAGCATCAATATTACCTGGGAAACTTGTTAGAAAT 3327
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3328 GCAAATTCTTGGGCTCTGCCCTAGACCTACTGAAACATACTCTGTGGGCGGGGCCCAGCAATCTGTGTTTGAAA 3401
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3402 CGCGATTCTGATTATTTGACAAAAGTTTGCAAACCACTGGTCTAGATAAGTAGCTCTTAGCCTTGGCTGCACAT 3475
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3476 TAAAATCATCTGGGCAACTTTTATAACCTACCAATCCTGGCCTCTTCCTCCAAAGATTCTGACTTAAATGGTTT 3549
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3550 CAGATGGGGACCATTGTTATGCGGTTATAGCCGACGCCTAGGTGCTACCTGAGGTCTTCAAAGCTAAAGGTCAG 3623
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3624 TGTTTCCCAGCCGTAAATGCATACCTCTAGACCTGGCCTTCTCAAGCCACTAGGTGTTGCTATAATAGAGAAGA 3697
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3698 AAAGGCATTTTCAGAACCGTCTTTGGATATGGATGAGGAGGAGGAAAATGTATTTCTTAGCTTCTGATAAGAGA 3771
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3772 TTATTTTGTTATTTTAATCTGAGTGCAATTTGCTAAATATTCATTTGCAACTTGTTAAATTTATTCAAAGAAAT 3845
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3846 TAAATGCCCATAAGTGACAGAAAGAATAAAGAATTGTGATATATATTTACAATAAAATACTCTTTAGCAATAAA 3919
Query 220 ------ 219
Sbjct 3920 AAGAAA 3925
