Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NR_160527.1
- Aligned Length:
- 2481
- Identities:
- 193
- Gaps:
- 2267
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTGTCTCTGAAGACCAGCTACAAGGAAATACTTCTGAAAAATCACTCTGAACCCCAAGCTGGAGTGAATCTTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCTGAGCTCTCTCATTCCAGAATGGCAATCTTGTTTCAGGAGAGATCTCTAATAGTGACTGATGGTAAAGGAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAAGGCTGTGCCTAGAACAAAGAATCAGGCTGGCAAAGAAATCACAGGTCTTTCCTCAAACTTTAAATTGCTAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCTCTGGAGATAGCTACCTGGACTTTACAGAGCTGTCAGAAGACTTGGGAAGGTTTGCCAGCATTGGAAAAAGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CACTTGGACTTCACAGAGCTGTCAGAAGACTTAGGAAGCTTTGCCAGTAGTTCCTGAGACCAGAAATACATATT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATGAAGCAGGTGCTGGAACAGGCCCTGGCCCCTACTTGTGAAGCTGCAGATATAGATGGTGTTACTGAGAAGGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AACTAAGGACTTGGCTCCAAAACAAAACAAAACAAAATCTGGAGATGCTGAATTTTGTTGGGGGGAATGTCTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGAACTGCAACATCAATGCAGTAAGTGTAGTAAAAGCTTTAGTTTATGGTGAGTCATTACTCAGCATCATGGAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCCACGATGAAGAGAATCTCTTTTCAATCTGTGCAATCAACAAGTTTTTGAAAGGCTTTTGTTTATAGTGGAAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCTCTTTTCCCCCTAGAAGAACCACCACAAGGAAAAATGCTGTCACCATAAGGAATGTGGGAAAGTTTTCAGCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACATGGCCTTATTTGACTTCAAAGAATCCACATGAGAGAGAGACTGCATAAATGTAATAACTGAGGAGGCCTTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTTCAGCAAAGAAACCTTATACAAACTCGTATAAAGAATGTAGGAAGACCTTCACCCAGAAGCCAGGACTGACT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTGCACCAGAGAATCTGCACAATAAACATGATGAATGTGGAGATGCTTGCTTCAGCATTGGAGAATTCACAGTA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAGGGAAACCCTGCCAGTGTGATGAGTACGGAAAAGTCTTCAGAGGTTGGAACTTGGGAAAAATCAGTGAGTGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATTCATATTAGAGAGGCTCTTATAAATGAGAGGATTGTGGAAACTTGTATAGACAGAGATCAGACCTCAACAAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGAGCCTCCACAGTATTGAAAAGTTAATATAATTAATGTAAGTGGGCAAGTTGTATGGGGAATGGGTAGTCTAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATTGCTCATTTTAGCCAGTAAAAACATTAAATTAGTTTCTTAGATCAAGAAAAGGAAATGTTAGAAGTTATTTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCCCTTCCAGAGGGGTCTATATGTGTAAGCAACCAGGACTTTTGAAATAAGTTGCATCTCTGGATTTGTGATCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GTCTCCTGGATGATTATCTCTGTTTTGGGAGACAGGTATTTTTTCTTCATGCCTGCTCTAGTCTCATCTCATAT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTTTAATTCATTCAGCAAGTATACACAATAGTATTATCGTCTACTGTTTGTTGTAAATATATATATATTATTTT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CTTTTTGGTCTGAGTAGGCTTGTATTGGTACCCTAGGACATAAAAATCACATATATCATGTTTCAGTAAATGCA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GTGAAAGGAACTATATTATTAAATTGCTGGGAATTTCTGTAAATTTGAGACTACCTTTATATTCTCCAACACAA 1628
Query 1 -----------------------------------------------------------------------ATG 3
|||
Sbjct 1629 GACCGTGTAGGTGTCCCTTCAGAGAGTATATTTTTCTAGCTTGGCTTCTTTATTTTCTTTATTTTTTTGAGATG 1702
Query 4 GAGTCT--CATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAG 75
|||||| | |.|||||||||||.||||||||.|.|||||.||||||||||||||||||||||.||||| |.||
Sbjct 1703 GAGTCTTGC-TCCTGTCGCCCAGGCTGGAGTGCAATGGCACGATCTCGGCTCACTGCAACCTCCGCCTC-CCAG 1774
Query 76 G-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATT 148
| |||||.||||||||||.|||.|.||||.||||||||||||||||||||||..||.|||||.|||.|||||
Sbjct 1775 GTTCAAGTGATTCTCCTGTCTCAGTCTCCCGAGTAGCTGGGATTACAGGCACTTGCCACCATTCCCAGCTAA-- 1846
Query 149 TTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG--- 219
|||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||...|
Sbjct 1847 -TTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTTGTGATC 1919
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1920 TGCCCACCTTGGCCTCCCAAAGTTCAGGGATTACAGGCATGAGCCACCATGCCCGGCTGTTTTTTTAAGATAGA 1993
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1994 AAAATATACTTCATGTATAGCCTATTGACAGATAATGACTGATATTTTTTCTTATAGATAACACATAATAAACA 2067
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2068 TTGTGAAGACTAATAAGTAACTTGCTTATTCTTTTCAGTTCTAAAACCTGTAGGAAAGAATCTTTAGAAGCTGT 2141
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2142 CAACAAGTTGATAATGTAGCCCAATCTCTACCCATGATAGGAGAGTAAGGCTTATATATTTTATAGTAGGGCAC 2215
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2216 TAAATACAGGAACCATGTATTTAAAAACTTTTTAGTGATTATCTCAGAATTCTAGGTGTCCCTCTGCTGTACAT 2289
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2290 CCCTAAATTTTTTGCATAGGTATTATTAATAAATTCATTATTTTCAAAGATGGACTGTGTTCTGTAAAAAGCTT 2363
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2364 TTCCAGTATCTGCAAATCACACAGTTTTTTTTAACTCTATTACTATTATATAAAATGATTTCTTAATATTGAAC 2437
Query 220 --------------------------------------- 219
Sbjct 2438 CAACCTTGCATTCCTAGAATAAACCTCACTTAGCCATGA 2476
