Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12783
Subject:
NR_164631.1
Aligned Length:
3775
Identities:
189
Gaps:
3560

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCATTCGCTCCAGGGTTTTGGGACCCTAGGTTGCGGAGTCCTTACCCTACCCTGGCCTCTCGAGCAGTTGTCCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CATAACTCGGAATCTAGAGCCGCTGTTGCGAGGCAGGAGCACGTGGCAGTCAAGTAGCTTCCCAGTCCCGAACG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCGCCCGTCCCCACCCCGCCGTGGCCACTAGCAACGACCTCTGTGAAGTTGGAGAGGCGGTAACGGAGGCACTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CCCCTGCTGCACCCCGCCGTTTCTACGGGGCTCAGAAACCAGTTTGTTTGTTTCGTCGGGGTAGTGTCGACCTG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TCTTACGGGCGTCGCCCGAGACAGGACGGAGTCAAACCCGTGGTATCAACTGAAGACGAGTGTCAGGATGTCAT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TTTCAAAATGCGGGATGGTACCTCTGCTTTATTAAGCCCCGTAGGAAGACTGCCACACCTAGACTGATGCTTAT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TAGTCATCACCGTTATTCCTACTAACGTCCTGTGTCACTGAGTTTTTTAAATGTCTAGCATATCTGTAAAGATG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CCTTAGAAAAAGAATCATGGAGAAGTATGTTAGACTACAGAAGATTGGAGAAGGTTCATTTGGAAAAGCCATTC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TTGTTAAATCTACAGAAGATGGCAGACAGTATGTTATCAAGGAAATTAACATCTCAAGAATGTCCAGTAAAGAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AGAGAAGAATCAAGGAGAGAAGTTGCAGTATTGGCAAACATGAAGCATCCAAATATTGTCCAGTATAGAGAATC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ATTTGAAGATTTTGGACTGGTTTGTACAGATATGTTTGGCCCTGAAACATGTACATGATAGAAAAATTCTTCAT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CGAGACATTAAATCTCAGAACATATTTTTAACTAAAGATGGAACAGTACAACTTGGAGATTTTGGAATTGCTAG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AGTTCTTAATAGTACTGTAGAGCTGGCTCGAACTTGCATAGGGACCCCATACTACTTGTCACCTGAAATCTGTG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AAAACAAACCTTACAATAATAAAAGTTTGAAGCTGGCAGTATGAAAAACCTGGTACTGAAGATAATATCTGGAT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CTTTTCCACCTGTGTCTTTGCATTATTCCTATGATCTCCGCAGTTTGGTGTCTCAGTTATTTAAAAGAAATCCT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  AGGGATAGACCATCAGTCAACTCCATATTGGAGAAAGGTTTTATAGCCAAACGCATTGAAAAGTTTCTCTCTCC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TCAGCTTATTGCAGAAGAATTTTGTCTAAAAACATTTTCGAAGTTTGGATCACAGCCTATACCAGCTAAAAGAC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CAGCTTCAGGACAAAACTCGATTTCTGTTATGCCTGCTCAGAAAATTACAAAGCCTGCCGCTAAATATGGAATA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CCTTTAGCATATAAGAAATATGGAGATAAAAAATTACACGAAAAGAAACCACTGCAAAAACATAAACAGGCCCA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TCAAACTCCAGAGAAGAGAGTGAATACTGGAGAAGAAAGGAGGAAAATATCTGAGGAAGCAGCAAGAAAGAGAA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GGCTGGAATTTATTGAAAAAGAAAAGAAACAAAAGGATCAGATTATTAGTTTAATGAAGGCTGAACAAATGAAA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AGGCAAGAAAAGGAAAGGTTGGAAAGAATAAATAGGGCCAGGGAACAAGGATGGAGAAATGTGCTAAGTGCTGG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TGGAAGTGGTGAAGTAAAGCCTTGAAGATTAAGTTCTCAGAAGATGCTTCTTAATCTGATCCCTGTTGTCTCTC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CAACTTCATCACCATCCATTCCCTACCACATACTGTATGCTCTATTCATGCTGAAATGAAGACTATATTTGTAG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TTTCATTACTATATGTGGTTTGCCAAATCTCTTTGTCTTTGCACTTGTGTTTCCTTTTACTTAATAGCACTCTC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CATCCCTCCTCACCCTCACGTCCCACCTCCATCCATTTAGCTAAATAACCAGTTACATAGATGAGTTAATCTAA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  ACATTCCTTCTGGGTAGATCCACCCTATTTAACCTTGGGCACATTACTGAACTTTTCTGAGCTTTGGTTTCTTG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  ATTTAAAAAAAAAAAAAAGTTTTTTTTCCAAGAACAGTGCCTGGAACCTGTCTGGCAAGGGCTTCTATAGTAAT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TTCCCTTTCCTTTCTTTGTTCTGCCAGTCTGAATCTTATACTTCCTCTTTTATTCATACAGCATCCTATACATA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  TCTCTATTTGTAGTTGGTAGAATTCTAAGATGGTCTCCAAGATTCTCAACTGCGGTATACACACCTTGTGTTAT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TCCATTCCCTTGAGTATAAGTGGTACCTGTAAATACTGTAGTATAGCAGCTCACTTGATTAGGTTATGTTATAT  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GGCAAGTGGTGATGGGATGGTCTCTCCCAGGGTTACGTTAACATATAAGACTCCTTCATAGCTGACTGGAAGGG  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  GAAAAGAAATTAGAGAGAGAGAATTCTGCTCACCTGGAAGATAGTAAACATTCATGTGGCAAAACAGTAGAGAT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GACCTCTACAAGTAGTGGTCTCTAATGAGCAACTAGCAAGAAAATTGTGGTCCTAGTCATACAGCCACAAGGAA  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  ATTAATTCTGCCAAGAACCAGTAAACTTGGAAGAGATCCTGAGTCTCAGGTGAGAATTGTAACCCTGGCTGACA  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  CCTTGATTTCTGCCTGGTGAGATCCTGAGGAGGGGACCCAGCTAAATGCACCCAGATTCCTGAGCCAGGGGAAC  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  TGAGATTATAAATAGATATTGTTTTAAGCTACTAAATTTGTGATAGTTTGTTATACAGCAATAGAAGATGAATG  2738

Query    1  ---------------------------------------------------------ATGGAGTCTCATTC-TG  16
                                                                     |||||||.||..|| ||
Sbjct 2739  CACTAATTTGTATCATTGAATAAACTGTAAGTCAATACATCTTTTTATTTTTTTGAGATGGAGTTTCGCTCTTG  2812

Query   17  TCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCC  90
            |..|||||.||||||||.|.|||||.||||||.|||||||||||||||||||||.||.|.||||||||||||||
Sbjct 2813  TTACCCAGGCTGGAGTGCAATGGCACGATCTCAGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGCGATTCTCC  2886

Query   91  TGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAG  164
            ||||||.||||||||||||||||||||||||||||..|.|.||||.||||.|||||    ||||||||||||||
Sbjct 2887  TGCCTCAGCCTCCGGAGTAGCTGGGATTACAGGCATGCACCACCACGCCCAGCTAA----TTTTGTATTTTTAG  2956

Query  165  TAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-------------------  219
            ||||||.||||||||..||||||||.|||||||||||||||||||.|||||||.|                   
Sbjct 2957  TAGAGACGGGGTTTCTGCATGTTGGTCAGGCTGGTCTCGAACTCCCGACCTCAGGTGACCTGCCTGCCTCGGCC  3030

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3031  TCCCAAAGTGCTGGGATTACAGGCGTGAGTCACCGTGCCCAGCCTAAGTCAATACATCTTCAAACTATAAGTTT  3104

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3105  CACTCATGTACACCCATTAATCTTGATATTTAGATGTACAATAGATACTTGTCAAATTGGATCAATTATAATTC  3178

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3179  TTGGTTTTTTTTCTCCAAAAGTTATAATTTGAATAAAAGTTTGTTTTATCTAGACATATACATTCTGCCCTGGA  3252

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3253  TTTATAGATTTGTTTTTCAGTCTCTTGAGGTGCAGAAGTTCTTCATATCATAGTAATAATTCATTAAGAGTAAC  3326

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3327  TTTTTCCAAATTTGTATTAATATAGATTATACAGTGTTTTTAGTAGTATAATTTTATCTTACCTTTAAGTAGAA  3400

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3401  CTTATTACCTCCTGAATGATCAGGAATGACTTAGAATCTGGTCCATTCTAAAATAACTAACCTCACATCTTACC  3474

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3475  TGATTGGAAAGAGAAAGCTTATCAACTTGTACTCCTTCAGATCTCAAGCATTTTTTTATCAAGTCCGTGATTAG  3548

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3549  CACTGAAGTTTTGATGATTTATTCTTCTCCCTTTTGTGTAATAAAGTGCTTTTTCCTATGATGTCTAATACAGT  3622

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3623  ATTAATCAGTTTTATTAATGTTTAATAACTGAGACAATTTTCAAGTTACATACTGTGTACTGAATAGATTTCTG  3696

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3697  CATCACTTTATAAACTTCTGTAATGCTTTCATTGAAGATTAATAAAACAATTTATTTTCCATGATTTAAAGGAA  3770

Query  220  -  219
             
Sbjct 3771  A  3771

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