Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NR_164631.1
- Aligned Length:
- 3775
- Identities:
- 189
- Gaps:
- 3560
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCATTCGCTCCAGGGTTTTGGGACCCTAGGTTGCGGAGTCCTTACCCTACCCTGGCCTCTCGAGCAGTTGTCCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CATAACTCGGAATCTAGAGCCGCTGTTGCGAGGCAGGAGCACGTGGCAGTCAAGTAGCTTCCCAGTCCCGAACG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGCCCGTCCCCACCCCGCCGTGGCCACTAGCAACGACCTCTGTGAAGTTGGAGAGGCGGTAACGGAGGCACTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCCCTGCTGCACCCCGCCGTTTCTACGGGGCTCAGAAACCAGTTTGTTTGTTTCGTCGGGGTAGTGTCGACCTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCTTACGGGCGTCGCCCGAGACAGGACGGAGTCAAACCCGTGGTATCAACTGAAGACGAGTGTCAGGATGTCAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTTCAAAATGCGGGATGGTACCTCTGCTTTATTAAGCCCCGTAGGAAGACTGCCACACCTAGACTGATGCTTAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TAGTCATCACCGTTATTCCTACTAACGTCCTGTGTCACTGAGTTTTTTAAATGTCTAGCATATCTGTAAAGATG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCTTAGAAAAAGAATCATGGAGAAGTATGTTAGACTACAGAAGATTGGAGAAGGTTCATTTGGAAAAGCCATTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTGTTAAATCTACAGAAGATGGCAGACAGTATGTTATCAAGGAAATTAACATCTCAAGAATGTCCAGTAAAGAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGAGAAGAATCAAGGAGAGAAGTTGCAGTATTGGCAAACATGAAGCATCCAAATATTGTCCAGTATAGAGAATC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ATTTGAAGATTTTGGACTGGTTTGTACAGATATGTTTGGCCCTGAAACATGTACATGATAGAAAAATTCTTCAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CGAGACATTAAATCTCAGAACATATTTTTAACTAAAGATGGAACAGTACAACTTGGAGATTTTGGAATTGCTAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGTTCTTAATAGTACTGTAGAGCTGGCTCGAACTTGCATAGGGACCCCATACTACTTGTCACCTGAAATCTGTG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAAACAAACCTTACAATAATAAAAGTTTGAAGCTGGCAGTATGAAAAACCTGGTACTGAAGATAATATCTGGAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTTTTCCACCTGTGTCTTTGCATTATTCCTATGATCTCCGCAGTTTGGTGTCTCAGTTATTTAAAAGAAATCCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGGGATAGACCATCAGTCAACTCCATATTGGAGAAAGGTTTTATAGCCAAACGCATTGAAAAGTTTCTCTCTCC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCAGCTTATTGCAGAAGAATTTTGTCTAAAAACATTTTCGAAGTTTGGATCACAGCCTATACCAGCTAAAAGAC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAGCTTCAGGACAAAACTCGATTTCTGTTATGCCTGCTCAGAAAATTACAAAGCCTGCCGCTAAATATGGAATA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CCTTTAGCATATAAGAAATATGGAGATAAAAAATTACACGAAAAGAAACCACTGCAAAAACATAAACAGGCCCA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TCAAACTCCAGAGAAGAGAGTGAATACTGGAGAAGAAAGGAGGAAAATATCTGAGGAAGCAGCAAGAAAGAGAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGCTGGAATTTATTGAAAAAGAAAAGAAACAAAAGGATCAGATTATTAGTTTAATGAAGGCTGAACAAATGAAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGGCAAGAAAAGGAAAGGTTGGAAAGAATAAATAGGGCCAGGGAACAAGGATGGAGAAATGTGCTAAGTGCTGG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGGAAGTGGTGAAGTAAAGCCTTGAAGATTAAGTTCTCAGAAGATGCTTCTTAATCTGATCCCTGTTGTCTCTC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CAACTTCATCACCATCCATTCCCTACCACATACTGTATGCTCTATTCATGCTGAAATGAAGACTATATTTGTAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TTTCATTACTATATGTGGTTTGCCAAATCTCTTTGTCTTTGCACTTGTGTTTCCTTTTACTTAATAGCACTCTC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CATCCCTCCTCACCCTCACGTCCCACCTCCATCCATTTAGCTAAATAACCAGTTACATAGATGAGTTAATCTAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ACATTCCTTCTGGGTAGATCCACCCTATTTAACCTTGGGCACATTACTGAACTTTTCTGAGCTTTGGTTTCTTG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATTTAAAAAAAAAAAAAAGTTTTTTTTCCAAGAACAGTGCCTGGAACCTGTCTGGCAAGGGCTTCTATAGTAAT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TTCCCTTTCCTTTCTTTGTTCTGCCAGTCTGAATCTTATACTTCCTCTTTTATTCATACAGCATCCTATACATA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TCTCTATTTGTAGTTGGTAGAATTCTAAGATGGTCTCCAAGATTCTCAACTGCGGTATACACACCTTGTGTTAT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TCCATTCCCTTGAGTATAAGTGGTACCTGTAAATACTGTAGTATAGCAGCTCACTTGATTAGGTTATGTTATAT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GGCAAGTGGTGATGGGATGGTCTCTCCCAGGGTTACGTTAACATATAAGACTCCTTCATAGCTGACTGGAAGGG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GAAAAGAAATTAGAGAGAGAGAATTCTGCTCACCTGGAAGATAGTAAACATTCATGTGGCAAAACAGTAGAGAT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GACCTCTACAAGTAGTGGTCTCTAATGAGCAACTAGCAAGAAAATTGTGGTCCTAGTCATACAGCCACAAGGAA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 ATTAATTCTGCCAAGAACCAGTAAACTTGGAAGAGATCCTGAGTCTCAGGTGAGAATTGTAACCCTGGCTGACA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CCTTGATTTCTGCCTGGTGAGATCCTGAGGAGGGGACCCAGCTAAATGCACCCAGATTCCTGAGCCAGGGGAAC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TGAGATTATAAATAGATATTGTTTTAAGCTACTAAATTTGTGATAGTTTGTTATACAGCAATAGAAGATGAATG 2738
Query 1 ---------------------------------------------------------ATGGAGTCTCATTC-TG 16
|||||||.||..|| ||
Sbjct 2739 CACTAATTTGTATCATTGAATAAACTGTAAGTCAATACATCTTTTTATTTTTTTGAGATGGAGTTTCGCTCTTG 2812
Query 17 TCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCC 90
|..|||||.||||||||.|.|||||.||||||.|||||||||||||||||||||.||.|.||||||||||||||
Sbjct 2813 TTACCCAGGCTGGAGTGCAATGGCACGATCTCAGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGCGATTCTCC 2886
Query 91 TGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAG 164
||||||.||||||||||||||||||||||||||||..|.|.||||.||||.||||| ||||||||||||||
Sbjct 2887 TGCCTCAGCCTCCGGAGTAGCTGGGATTACAGGCATGCACCACCACGCCCAGCTAA----TTTTGTATTTTTAG 2956
Query 165 TAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------------------- 219
||||||.||||||||..||||||||.|||||||||||||||||||.|||||||.|
Sbjct 2957 TAGAGACGGGGTTTCTGCATGTTGGTCAGGCTGGTCTCGAACTCCCGACCTCAGGTGACCTGCCTGCCTCGGCC 3030
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3031 TCCCAAAGTGCTGGGATTACAGGCGTGAGTCACCGTGCCCAGCCTAAGTCAATACATCTTCAAACTATAAGTTT 3104
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3105 CACTCATGTACACCCATTAATCTTGATATTTAGATGTACAATAGATACTTGTCAAATTGGATCAATTATAATTC 3178
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3179 TTGGTTTTTTTTCTCCAAAAGTTATAATTTGAATAAAAGTTTGTTTTATCTAGACATATACATTCTGCCCTGGA 3252
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3253 TTTATAGATTTGTTTTTCAGTCTCTTGAGGTGCAGAAGTTCTTCATATCATAGTAATAATTCATTAAGAGTAAC 3326
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3327 TTTTTCCAAATTTGTATTAATATAGATTATACAGTGTTTTTAGTAGTATAATTTTATCTTACCTTTAAGTAGAA 3400
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3401 CTTATTACCTCCTGAATGATCAGGAATGACTTAGAATCTGGTCCATTCTAAAATAACTAACCTCACATCTTACC 3474
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3475 TGATTGGAAAGAGAAAGCTTATCAACTTGTACTCCTTCAGATCTCAAGCATTTTTTTATCAAGTCCGTGATTAG 3548
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3549 CACTGAAGTTTTGATGATTTATTCTTCTCCCTTTTGTGTAATAAAGTGCTTTTTCCTATGATGTCTAATACAGT 3622
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3623 ATTAATCAGTTTTATTAATGTTTAATAACTGAGACAATTTTCAAGTTACATACTGTGTACTGAATAGATTTCTG 3696
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3697 CATCACTTTATAAACTTCTGTAATGCTTTCATTGAAGATTAATAAAACAATTTATTTTCCATGATTTAAAGGAA 3770
Query 220 - 219
Sbjct 3771 A 3771
