Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- XR_001737158.2
- Aligned Length:
- 4372
- Identities:
- 191
- Gaps:
- 4157
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCAGCCACCCTGGGGAAGGTGGATGCCGGAAGAGGCGTCGCCTGCGGGTCACCCAGAGGACACCCGGCGGGGAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTCCGAGGGTGGGAGTGAGGAGAGGTAGGAGAGGCCACGGCAGAGGGAGGCCCCGCGCAGAGTGGGAACCATCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCGGTGCGGGCCTGAACTTCCAGGGCCGGCTACTCCTCGGCAGAGCGACCGCGCGGTGTCTCAGAGCGCGGCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGGAGCCGCACTAAGAGCGCTGGACGGCGGGAGAGAGGCTCGGAGGACCGGTAGCTCCCAGCAAAGCGGCCCAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGGATGTCGGGAGCTATCTTCGGGCCCCTGGAGGGCCCGAGCTCCCTGGATGCCCCGAGCATCCACCCGCTGGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTGCCCGCTGTGCCACGTGCAGTACGAGCGCCCGTGTCTTCTGGACTGTTTCCACGACTTCTGTGCCGGCTGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGCGTGGCCGCGCGACCGACGGCCGCCTCACCTGCCCGCTGTGCCAGACGTGGAGACCACGTACTTCTGCAACA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGTGCGGACAGCCCCTATGCGCGCGCTGCCGCGACGAGACGCACCGAGCACGCATGTTCGCGCGCCACGACATC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTGGCCCTGGGTCAGCGAAGCCGCGACGTGCCCCAGAAGTGCACGCTGCACGCAGAGCCCTACCTCTTGTTCTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CACCGACAAGAAGTTGCTGTTGTGCATCCGCTGCTTCCGCGACATGCAGAAGGAGAGCCGGGCACACTGCGTGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACCTGGAATCGGCTTACGTGCAGGGCTGCGAGCGGCTGGAGCAGGCGGTGCTGGCCGTGAAGGCCCTGCAGACG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCCACGCGGGAGGCCATCGCGCTGCTGCAGGCCATGGTGGAGGAGGTGCGGCACAGCGCCGCCGAGGAGGAGGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CGCTATCCACGCCCTCTTCGGCAGCATGCAGGACAGGCTGGCAGAGAGGAAAGCGCTGCTGCTGCAGGCTGTGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGAGCCAATACGAAGAGAAGGACAAGGCCTTCAAGGAGCAGCTCTCTCACTTGGCCACCTTGCTGCCCACCCTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CAGGTCCACCTGGTCATCTGCTCCTCCTTCCTCAGCTTGGCCAACAAGGCTGAGTTCCTGGACCTGGGCTATGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCTGATGGAGAGGCTGCAGGGCATCGTCACGCGGCCGCACCACCTAAGGCCTATTCAGAGCAGCAAGATTGCCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GTGACCACCGAGCTGAATTCGCGCGCTGTCTGGAGCCACTGCTGCTGCTGGGGCCACGTCGGGTGGCAGCTGCT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCAAGTGGTGCTAACACGCTGGCAGGGGGCTTAGGCCCCAAGGCGCTGACGGGGCCCCACTGCCCCTCCCCAGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGGAAAGATGTCGGGGTCACCCGTCCAAAAGCCCACGCTGCACCGGTCCATCAGCACCAAGGTGCTGCTGGCGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGGGCGAGAACACGCCCTTCGCAGAGCACTGCCGCCACTATGAGGACTCCTACCGGCACCTGCAGGCAGAGATG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CAGAGCCTAAAGGACCAGGTACAGGAGCTGCACCGAGACCTCACCAAGCACCACTCGCTCATCAAGGCGGAGAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CATGGGAGACGTCCTGCACAAGTCCCTGCAACTGGACGTGCAGATCGCCTCGGAGCACGCCTCCTTAGAGGGCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGAGGGTCGTCTTCCAGGAGGTAGCCCTCCCAAGGACTCTAACTCCAGCCCCACCTGTCAGGGGATACCTGGGC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TACCCTAAGACACTTTTCTCTTTCAGATTTGGGAGGAAGCCTATCAGCGAGTGGCTAATGAGCAGGAGATTTAT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GAAGGTTCCAGACAGTTGGCTGCCGAGTGAACCCTCTGTCCCTGAGCTAACCCACATACTAGCAGAGGAGGAAG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TCAGAGTCGGCCACTAACCAGATGCAAATCCCCACACTCTTCCCCTTAGCGCTTGACCGTGCCTCCCAGCTGCT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AACTGGCCTCAAATGATGCATGTGAGGTCAGGATTCATTGAGTAGAATGCCCCCACCAAGTGCCTCCCTCTTTA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATTAGAGGTCATCATGGAAATGGTCGGGATATTTACGTGGTGCCTGGCTTGAGTAAAAATCTGAAGCCAGATGC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TTCAGGATTAAGACCCCATGCTCTGGCCTTGGCCCCACAGCCCAGCTCCATGACCTTCTCCAGCTGAGGCAGGA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GAATGCCTACCTGACCACCATCACCAAGCAGATCACGCCCTACGTCCGCTCCATTGCCAAGGTGAAGGAGCGGC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TGGAGCCCAGGTTTCAGGCACCCGTGGATGAGCAGTCAGAGAGTCTACAGAACACGCACGACGACAGCAGGAAC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AACGCGGCCTCAGCCAGGAATAATCCAGGAAGTGTCCCGGAAAAGAGAGAGAAGACATCAGAGCCTAAAGGAAA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CAGCTGGGCTCCGAACGGCCTCTCAGAAGAGCCTCTACTGAAAAATATGGATCATCACAGATCCAAACAGAAAA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ATGGGGGCGATGTCCCCACATGGAGGGAACACCCGACTTAGCAAATGGGACCGGTCCCCAGGGTCAGGCTCTTA 2516
Query 1 -------------------------------------------------------------------------A 1
|
Sbjct 2517 GAGCAGGCACAAGACTGGGACACTGGACAGAAGGTTGTTCCCATGATGGTTTTTTTTATTTTTTATTTTTGAGA 2590
Query 2 TGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATG--ATCTCGGCTCACTGCAACCTCTGCCTCTCG 73
||||||.||..|||||.||||||.||||||||.|.||| || |||||||||||||||||||||||||||..|
Sbjct 2591 TGGAGTTTCGCTCTGTTGCCCAGGCTGGAGTGTAATGG--TGCAATCTCGGCTCACTGCAACCTCTGCCTCCTG 2662
Query 74 AGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAAT 147
.|.||||||||||||||||||||.||||||.||||||||||||||||||||.|..|..||||.||||.|||||
Sbjct 2663 GGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCCTGACACCACGCCCCGCTAA- 2735
Query 148 TTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-- 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||.||.|||||||.|
Sbjct 2736 -TTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACGCCAGACCTCAGGTG 2808
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2809 ATCCACCTGCCTCAGCCTCCCAAAGTGCTGAGATTACAGGGGTGAGTCACCGCGCCTGGCCAATGTTGTTGTTG 2882
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2883 TTTTTAAGACAGAATTTCACTCTTTGTTGCCCAGGCTGGAGTGCAATGGCGCAATCTCTGGCTCACCGCAACCT 2956
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2957 CCGCCTCCCAGGTTCAAGCGATTCTCCTACCTCAGCCCCCAGAGTAGCTGGGATTACAGGCATGTACCATCACA 3030
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3031 CCCGGCTAATTTTTTGTATTTTAAGTAGAGAGGGGGTTTCTCCATGTTGGTCAGGCTGGCCTCGAACTCCCAAC 3104
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3105 CTCAGGTGATCCGCCCACCTCGGCCTCCCAAAATGCTGGGATTACAGGGGTAAGCCACTGTGCCCGGCCGGTTA 3178
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3179 TTTCTTTAAAAGGTAATCATTTGTCAAGAGTAAAACCCAGAAGCTCTGACAGGCCATAATTTCAGATCCTTTGG 3252
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3253 CTTGGGCAGTTTTGATTTTCCCCGTGTTTGCATGGCATGAAGTCTTCGTCCTTGTCACAGTAGCTTGGGATGAC 3326
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3327 TCCCAGTCCACATGGAAAACATCAGGGAGTGACAATCCAGCAAGAAATCCCTCGCTAGTTCCACACCTACGCAC 3400
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3401 CGAGCGTCGGTGTGCCAGGCCCTGTGCTGGGCAGAGTGTGGTATGTCAGGGTGTGCCGGTTTTAGGTAACAAGA 3474
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3475 CTCCACCACTGAGTGGCACCTGCCCTATTGCAAAGGAATCCAGTTCCTCCGGAATAACAGTCCCACTGTTAACC 3548
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3549 TGGTGCTACTGGGAAGTTCCACACAGTAATCTGAGCAGTGACTCATGGAAGGATGAGGAACGTTTGCTCCAGCT 3622
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3623 TCTCTCCCTTTCCAGCAAGGGCAGAGCTCCTAAAGCCAGGGGTTAGCACCTGGCCAGCTTATGTGGCAGATGGT 3696
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3697 CTCAGTTACAACTTCGCTGCTTTCCCAAACTCCTGCAGCCCTCCTGAGTCCGACTTCCGTTGATAGCAAGGCAC 3770
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3771 TGGGTGGCAGCAACCTTTTTTCTAGTAGTTTTTTCCCAGCAGTTTTCCATTTCTCCACAGTATCCTTTTCATTT 3844
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3845 AGAGGAGCTTAATAAATGCTTTTTAAAAAGTAACCCACGTGACGTAAAATTTTACAAGTTTTTGTGGCAAAATG 3918
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3919 ATGCCCAGATAGTCACATTTAAGCAAATATTCAGCTTGATTCAGTGATTAACAGCAAATGGGTCTACGTGCTAA 3992
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3993 CATGGCAGCACATTCAACACATAACACATCACTCACATTGACGTCCACTGTCCCTGCACCTGCTACTTCAGGGG 4066
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4067 CACTGAGGCTCCTGTTCCAAGGCCTTACAAACCTATGTGGTGGCCTGCAGGGCAAAAGGAATTATCATTACAAC 4140
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4141 TGGTTAGAGGTAGGAATTCAGAAAGAAATTGAGGAGGCCAAACACACGTCGTTTGAGGCTAAAGGCTTAAGACG 4214
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4215 CTTCTTACCCAAGAGTGACCTCAGAGTTTCACATCCCAGACAATCACACTGTGGTTGAGTGAAATCAAGTGCAG 4288
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4289 TTTTATTTAAGAACTGGAAAGAATAATCAGTATCTGTGAAAGAAAATCCAATTTAGAATATTTAAATAAACATT 4362
Query 220 ------ 219
Sbjct 4363 TATGTA 4368
