Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12783
Subject:
XR_001737250.1
Aligned Length:
2314
Identities:
190
Gaps:
2098

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCGATAGCGGCAAGATGGCGGACCGTGGCGGCGTGGGTGAAGCCGCAGCTGTTGGAGCGTCTCCTGCATCTGTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCTGGCCTAAACCCGACGCTAGGCTGGAGGGAGCGACTGCGGGCCGGGCTGGCGGGGACTGGGGCCTCGTTGTG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GTTCGTGGCGGGGCTGGGGCTGCTTTACGCCCTGAGGATCCCTTTGAGGCTGTGTGAGAATTTGGCAGCGGTGA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CTGTATTTTTAAATTCATTGACACCCAAATTCTATGTGGCACTTACAGGGACCTCTTCATTGATATCAGGACTA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ATATTTATATTTGAATGGTGGTACTTCCATAAGCATGGCACATCTTTTATTGAGCAAGTATCTGTAAGCCATTT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GCAACCACTGATGGGAGGAACAGAGAGCAGCATTTCAGAACCAGGTTCTCCTTCGAGGAACAGAGAAAATGAAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CCAGCAGACAGAATTTGTCAGAATGTAAGGTATGGAGAAACCCTCTAAATCTTTTCAGAGGAGCAGAATATAGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGATACACTTGGGTGACTGGTAAAGAGCCACTTACATACTATGACATGAACCTGTCAGCTCAGGACCATCAGAC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CTTTTTCACCTGTGACACAGATTTTTTACGTCCTTCAGACACAGTTATGCAGAAGGCTTGGAGGGAAAGAAATC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CTCCAGCTCGAATCAAAGCAGCCTATCAAGCTTTAGAATTAAACAATGACTGTGCCACTGCATATGTTCTACTG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GCTGAGGAAGAAGCAACAACTATTGTAGATGCTGAAAGGTTATTTAAACAGGCACTCAAGGCAGGAGAAACAAT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TTATAGGCAGTCACAGCAGTGCCAGCACCAAAGTCCTCAGCATGAAGCTCAACTGAGGAGAGATACCAATGTAC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TGGTATATATTAAAAGAAGATTGGCAATGTGTGCAAGAAAATTAGGAAGAATAAGAGAAGCAGTAAAAATAATG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGAGATTTGATGAAAGAATTTCCTCCTCTTACCATGTTGAACATCCATGAAAATCTCTTAGAATCACTTTTAGA  1036

Query    1  -----------------------------------------ATG--GAGTCTCATTCTGTCGCCCAGACTGGAG  31
                                                     |||  |||||||.|.|||||.|||||..|||||
Sbjct 1037  ATTACAGGCCTATCCAGATGTTCAGGCAGTCCTAGCAAAATATGATGAGTCTCGTACTGTCACCCAGGTTGGAG  1110

Query   32  TGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCG  104
            ||.|.|||||..|||||||||||||||||||||.|||| ||.||| |||||.||||||||||||||.||||||.
Sbjct 1111  TGCACTGGCACAATCTCGGCTCACTGCAACCTCGGCCT-TCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCT  1183

Query  105  GAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTT  178
            ||||||||||||||||||||||..||.|.||..|||||||||  ||||||||||||||||||||||..||||||
Sbjct 1184  GAGTAGCTGGGATTACAGGCACCTGCCATCACACCCGGCTAA--TTTTTTGTATTTTTAGTAGAGACAGGGTTT  1255

Query  179  CACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG---------------------------------  219
            |||.||||||||||||.|||||||||||||||||||||..|                                 
Sbjct 1256  CACTATGTTGGCCAGGTTGGTCTCGAACTCCTGACCTCGTGATCCACCCACCTCAGCCTCCCAAAGTGCTGGGA  1329

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1330  TTACAGGCATGAGCCACCACGCCCGTCCATAAGCAGGTTATTGTAGACATTGGTTGAACGCATTTCACCGTTGT  1403

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1404  GCAGACGGCTTTCATAGACATAATTTCATCTCGGTCAGAAAATATCATTATTTTGAGAGGTGAAAACTGAGGTC  1477

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1478  AAACAAGTTGCTACTAGCTCAAAGATGCTTAGCTGGTAAATAGTAAGATAAAGATTCAGATTCAGCTTTTTCAA  1551

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1552  CTTCATATACGGGTTTTTCCTACTATATTATAGATTTTTCAACATCACGTCCAGGTTTTTCCTATATAACTATT  1625

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1626  GAATTTGCATTGCATTGTGAATTATTCTTTTTTTTGTTTTGTTTTGTTTTGTTTTTTTTGGAGACGGAGTTTCA  1699

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1700  CTCTTGTTGCCCAGGCTGGAGCGCAATGGCGCAATCTTGGCTCACTGCAACCTCCGCCTCCTAGGTTCAAGCGA  1773

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1774  TTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGCGCCACCATGCCTGGCAAATTTTTGTATTTT  1847

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1848  TAATAGAGACGGGGTTTCTCCATTTTGGTCAGGCCGGTCTTGAACTCCTGACCTCATGATCCACCCGCCTCAGC  1921

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1922  CTCCCTAAGTGCTGGGATTATAGGCATGAGCCACCATGCCTGGCCGTGAATTATTCTTATTAAAAAATTGTCTC  1995

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1996  AATACCTTTTTTGTAATTCCTACCTAAATTGAAAATTATCGTTACAGATATAAGCCTTCCAAAGTCAGCAGCAA  2069

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2070  TCTGTTACACAGCAGCACTGTTGAAGACAAGGACTGTTTCAGAAAAATTCTCTCCAGAAACAGCCTCCAGAAGA  2143

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2144  GGATTAAGCACAGCAGAAATTAATGCCGTGGAAGCAATTCATAGAGCTGTGGAATTTAATCCTCATGTTCCAAA  2217

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2218  ACTTTTAGAATGATTCCATACCCGTTAGAGAAAGGACATCTATTTTACCCTTATCCCAGCTGCACAGAGACGGC  2291

Query  220  --------------------  219
                                
Sbjct 2292  TGATAGAGAGCTATTACCTA  2311

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