Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- XR_001738696.1
- Aligned Length:
- 3888
- Identities:
- 189
- Gaps:
- 3672
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCCGCGCAGGCGCTGTGGTGGGCTCCGGTGCACTGTGGGATGGAAACCGGAGCGGCGCGTCCTGGCAGGACCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCGGCGGCGGCGGCGGGGCCGGCGGCGGCCAGGGACCCGGGCTTAGGCTCGGCCAGGCCGGCTGAGGGGCGCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCGGCCAGCGGGCGGCGGACGCCGTCATGAACGCGGCGGTGGTGAGGCGGACGCAGGAGGCGCTGGGGAAAGTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATTCGGAGGCCGCCGCTGACCGAGAAGCTGCTGAGCAAGCCCCCGTTCCGCTACCTGCACGACATCATCACGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGTGATTAGAATGACTGGTTTCATGAAGGGCCTCTACACAGACGCCGAGATGAAGTCTGATAATGTGAAGGATA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAGATGCAAAAATTAGCTTCCTACAAAAGGCCATAGACGTGGTTGTAATGGTGTCGGGAGAGCCACTGTTGGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAACCAGCCCGAATCGTGGCGGGGCATGAGCCTGAAAGAACAAACGAGCTGCTCCAGATAATTGGAAAATGCTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCTCAACAAGCTCTCTAGTGACGATGCGGTGCGGAGGGTTTTAGCTGGAGAGAAGGGAGAAGTGAAAGGCCGGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCTCACTGACCTCAAGATCTCAGGAATTGGATAATAAGAATGTGCGAGAAGAAGAGTCCAGAGTTCACAAAAAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACAGAGGATAGAGGAGACGCTGAAATAAAAGAGAGAAGTACAAGCAGAGATCGAAAACAGAAGGAAGAATTGAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGAAGACCGCAAGCCAAGAGAAAAGGACAAGGACAAGGAGAAGGCCAAGGAGAATGGCGGAAACAGACACAGAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAGGGGAGAGAGAGAGAGCCAAAGCCCGGGCCAGGCCAGACAACGAGCGACAGAAAGACAGAGGCAACAGGGAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CGGGACAGAGACTCCGAGCGCAAGAAGGAGACAGAGAGAAAGAGTGAGGGGGGGAAAGAGAAGGAGAGACTGAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGACAGGGACCGAGAGCGCGACCGGGACAAAGGGAAGGACAGGGACAGACGGAGAGTGAAAAACGGGGAGCACT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCTGGGACCTGGACAGGGAGAAGAACAGAGAGCATGACAAACCTGAGAAAAAGGTGACTCCACCAGTGATGCAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAGGAGATGCTGGACCTGCTGGCCAAGATAAGTCTGAGGTGCCAGAGACTCCAGAAATTCCTAATGAGCTTTCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCCAACATCAGAAGAATTCCTCGGCCTGGGAGTGCAAGACCAGCCCCTCCCCGGGTCAAACGGCAAGACAGCAT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GGAGGCGCTACAAATGGATAGGTCAGGGAGTGGTAAAACCGTTTCAAATGTGATTACAGAGTCACACAATTCTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACAATGAAGAGGATGATCAATTTGTGGTGGAAGCTGCCCCTCAGCTCTCTGAAATGTCAGAAATTGAAATGGTA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ACAGCAGTGGAACTAGAAGAAGAGGAGAAGCATGGTGGACTTGTGAAAAAAATTTTGGAGACGAAGAAAGATTA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TGAGAAATTGCAGCAGTCACCCAAACCTGGGGAGAAGGAGCGATCTCTCTTTGAGTCGGCATGGAAGAAGGAGA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGGACATCGTTTCCAAGGAGATAGAGAAGCTCCGCACGTCCATCCAGACCCTGTGCAAGAGCGCACTTCCCCTG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGGAAGATCATGGACTACATCCAGGAAGACGTGGATGCCATGCAGAATGAGCTGCAGATGTGGCACAGCGAGAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CAGGCAGCACGCCGAGGCCCTGCAGCAGGAGCAGAGGATCACAGACTGTGCCGTGGAGCCCTTAAAGGCTGAGC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TCGCGGAGCTGGAGCAGCTGATCAAAGACCAGCAAGACAAGATCTGTGCTGTGAAGGCCAACATCCTCAAGAAT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GAAGAAAAAATCCAGAAAATGGTATATAGTATCAATTTGACTTCGAGAAGGTGAACACTCAAAAGTTTCAGAGA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TGAAAAGTCACCTCAGTTTAAAAGCAAAAAGGAAGATAGAAAATCATTACTCTTTTAAGTTCCAGTTTGCTAAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AAAATGAACAGTTTACAATGTTATTATCCAGCTAATTTTCAGAGCTTTAAAACTGTAAGCATGTTAAGTGTATT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AAAAAAACCATGTTTTCTTACCTCCTTCCAGATGGAATACTGGCTAGTTATAAATAGCGCTTCCAAACACCTCT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GTGAAAAGTTTTTTTGAAAGCCTGTTCTTTGTGTTTCTGCTGTAACCTGTTTAGTTCTGTACCAGAACTCTCTA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GCAGGTAAGTGGTGTGGGCATACCAAGGGAACAGTAGTCCTTTATTTTGGTTTAGTGGAAAGACTTTCAGAGGT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CAGTGCCGAATGAAGGATGACTGTGTACTTTTTGATAGGCACTTGATAAGTAGAATGAGGCCTGAAAATGAATA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CATTATATTTTTAGTTAATTTCCAATGGAAAGGGCTAACCTCAGCCTGTCTCCATATCAGGTACCTATCAACTG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GATTGTTTTCATTTTTGTTTTTTGACCTCTTTGTAATTGCATGTACTTCTCTATGTAATTTTCCTCTTGATCTC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TACTATCGTTTGCTTGTGTTTCTAGTCCTTAAAGTTCATAAATTTAAAAAGGAGATTTCAGGATGGCCTTTATG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GACGTTGTCTGGACATACATCCTCACTTTCTTCCGCAGTTTACCCTGGTTTTCCTCAGACAGAGGCTAGCGCAG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CCCCCCGGAGTCCTTGTTCTCCTTAAGAGGGTCTCGCTCTGCAAAGCATTGGCGCCATGGCTTTTCCTTTGCAT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GGGTGTGCATACCGAGAGACAGGCAGCTTAGGAAAAACAACATAAGGAAGACTTAAAAGGATGCACTGATTTAC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GACGTTTTTTGATGTTAGCCATTTTTTTGGAAATTGTTTTTTAAAGCAAAAGTTTTTTAAAAACATGGTTTATA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GTTTTTCACTTACATATACTATTGTAAATACTTAGCAGAGTCTTAAGTTACTGTATAAAACATTTCATTGTGTT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TGAAGACATACTTATGGGTCTTGAGGTCTGGGTCCTAATACTTTTAAATAGTGTATTTATTATGTAAACTGAGG 3034
Query 1 -------------------------------------------------------------------ATGGAGT 7
|||||||
Sbjct 3035 AGTGCCATTTAAAGTGTGAGGATTGCCTGAAAAGGTTTTGTTTCTTTCTTTTTTTTTTTTTTTTGAGATGGAGT 3108
Query 8 CTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAG 81
||.|.||||||||||||.||||||||.||||||...|||||||||||||||||||.|.|||||.||||.|||||
Sbjct 3109 CTTACTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAACCACCGCCTCCCGAGTTCAAG 3182
Query 82 CGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTG 155
.||||||||||||||.||||||.|||||.||||||.|||||||.|||||.|||||||||.||||| ||||||
Sbjct 3183 TGATTCTCCTGCCTCAGCCTCCTGAGTAACTGGGACTACAGGCGCACGCCACCATGCCCAGCTAA---TTTTTG 3253
Query 156 TATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG---------- 219
||||||.||||||||||||||||||||.|||||.|||||.|||||||.|.|||||||||||..|
Sbjct 3254 TATTTTCAGTAGAGATGGGGTTTCACCGTGTTGACCAGGATGGTCTCCACCTCCTGACCTCGTGATCCGCCTGC 3327
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3328 CTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGCACCCGGCCAGGTTTTGTTTCTTTAAGGATTA 3401
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3402 GCACAAATGGCACCGTTGGGTTTTTCTTCATACAATTTCCAAAATAAATTCTGTACTCAGGTTGTTATATGATT 3475
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3476 TTCTGAGCTGAATAAGTTCAGGAGCAGATTATTAAGATCTGCCATTCTGAAACGCTGGTCTTTTTCTCCTTCCT 3549
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3550 ATAGTGCACCATAAAATTCTGTTTGATCAGATTATATTACATACATTTTGGGGGAGTGGAGGGACATGAGTTAA 3623
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3624 GTAGCCCTTCATGTATTTATAATCTCTTTTCTACTGAATCAAATGACTTAGCCATGACCCTGAATGGACCTTGT 3697
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3698 TTTACTTCAAGTTGAGATGTCTGCCTTTTATGAATTTGTATATGTGAATAGAGTTTGGGGGTTGCCAAAAATTG 3771
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3772 CATACATTGTATGTAAGTAAAATTTTTTATGAAGTAGTCTGTCAAATTGTATCATAAAGTTTATTTTTCTTTTA 3845
Query 220 ---------------------------------------- 219
Sbjct 3846 TACGTAAATCATTAAAAATAATCACATATTTTTTCCATAA 3885
