Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- XR_001748856.1
- Aligned Length:
- 4279
- Identities:
- 186
- Gaps:
- 4068
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAAGTTGTAGGCGGGGCGCGAGGTTCTAGTACCCGAGCTCATACTAGGGACGGGAAGTCGCGACCAGAGCCATT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAGGGCGCGGGGACTGCAACCCTAATCAGAGCCCAAATGGCGCAGTGGGAAATGCTGCAGAATCTTGACAGCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTTTCAGGATCAGCTGCACCAGCTTTACTCGCACAGCCTCCTGCCTGTGGACATTCGACAGTACTTGGCTGTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGGATTGAAGACCAGAACTGGCAGGAAGCTGCACTTGGGAGTGATGATTCCAAGGCTACCATGCTATTCTTCCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTTCTTGGATCAGCTGAACTATGAGTGTGGCCGTTGCAGCCAGGACCCAGAGTCCTTGTTGCTGCAGCACAATT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGCGGAAATTCTGCCGGGACATTCAGCCCTTTTCCCAGGATCCTACCCAGTTGGCTGAGATGATCTTTAACCTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTTCTGGAAGAAAAAAGAATTTTGATCCAGGCTCAGAGGGCCCAATTGGAACAAGGAGAGCCAGTTCTCGAAAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACCTGTGGAGAGCCAGCAACATGAGATTGAATCCCGGATCCTGGATTTAAGGGCTATGATGGAGAAGCTGGTAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AATCCATCAGCCAACTGAAAGACCAGCAGGATGTCTTCTGCTTCCGATATAAGATCCAGGCCAAAGGGAAGACA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCCTCTCTGGACCCCCATCAGACCAAAGAGCAGAAGATTCTGCAGGAAACTCTCAATGAACTGGACAAAAGGAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAAGGAGGTGCTGGATGCCTCCAAAGCACTGCTAGGCCGATTAACTACCCTAATCGAGCTACTGCTGCCAAAGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGGAGGAGTGGAAGGCCCAGCAGCAAAAAGCCTGCATCAGAGCTCCCATTGACCACGGGTTGGAACAGCTGGAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACATGGTTCACAGCTGGAGCAAAGCTGTTGTTTCACCTGAGGCAGCTGCTGAAGGAGCTGAAGGGACTGAGTTG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCTGGTTAGCTATCAGGATGACCCTCTGACCAAAGGGGTGGACCTACGCAACGCCCAGGTCACAGAGTTGCTAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGCGTCTGCTCCACAGAGCCTTTGTGGTAGAAACCCAGCCCTGCATGCCCCAAACTCCCCATCGACCCCTCATC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTCAAGACTGGCAGCAAGTTCACCGTCCGAACAAGGCTGCTGGTGAGACTCCAGGAAGGCAATGAGTCACTGAC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGTGGAAGTCTCCATTGACAGGAATCCTCCTCAATTACAAGGCTTCCGGAAGTTCAACATTCTGACTTCAAACC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGAAAACTTTGACCCCCGAGAAGGGGCAGAGTCAGGGTTTGATTTGGGACTTTGGTTACCTGACTCTGGTGGAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CAACGTTCAGGTGGTTCAGGAAAGGGCAGCAATAAGGGGCCACTAGGTGTGACAGAGGAACTGCACATCATCAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTTCACGGTCAAATATACCTACCAGGGTCTGAAGCAGGAGCTGAAAGACCCCTGGCTTCCCTCATCATCTGTCT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GTGGCTATCTGTCCCACAGGGCAGAACTGTAGGACTGAGGATCCATTATTGTCCTGGGCTGACTTCACTAAGCG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGAGAGCCCTCCTGGCAAGTTACCATTCTGGACATGGCTGGACAAAATTCTGGAGTTGGTACATGACCACCTGA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGGATCTCTGGAATGATGGACGCATCATGGGCTTTGTGAGTCGGAGCCAGGAGCGCCGGCTGCTGAAGAAGACC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ATGTCTGGCACCTTTCTACTGCGCTTCAGTGAATCGTCAGAAGGGGGCATTACCTGCTCCTGGGTGGAGCACCA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GGATGATGACAAGGTGCTCATCTACTCTGTGCAACCGTACACGAAGGAGGTGCTGCAGTCACTCCCGCTGACTG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AAATCATCCGCCATTACCAGTTGCTCACTGAGGAGAATATACCTGAAAACCCACTGCGCTTCCTCTATCCCCGA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ATCCCCCGGGATGAAGCTTTTGGGTGCTACTACCAGGAGAAAGTTAATCTCCAGGAACGGAGGAAATACCTGAA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ACACAGGCTCATTGTGGTCTCTAATAGACAGGTGGATGAACTGCAACAACCGCTGGAGCTTAAGCCAGAGCCAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AGCTGGAGTCATTAGAGCTGGAACTAGGGCTGGTGCCAGAGCCAGAGCTCAGCCTGGACTTAGAGCCACTGCTG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AAGGCAGGGCTGGATCTGGGGCCAGAGCTAGAGTCTGTGCTGGAGTCCACTCTGGAGCCTGTGATAGAGCCCAC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ACTATGCATGGTATCACAAACAGTGCCAGAGCCAGACCAAGGACCTGTATCACAGCCAGTGCCAGAGCCAGATT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TGCCCTGTGATCTGAGACATTTGAACACTGAGCCAATGGAAATCTTCAGAAACTGTGTAAAGATTGAAGAAATC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ATGCCGAATGGTGACCCACTGTTGGCTGGCCAGAACACCGTGGATGAGGTTTACGTCTCCCGCCCCAGCCACTT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CTACACTGATGGACCCTTGATGCCTTCTGACTTCTAGGAACCACATTTCCTCTGTTCTTTTCATATCTCTTGCC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CTTCCTACTCCTCATAGCATGATATTGTTCTCCAAGGATGGGAATCAGGCATGTGTCCCTTCCAAGCTGTGTTA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ACTGTTCAAACTCAGGCCTGTGTGACTCCATTGGGGTGAGAGGTGAAAGCATAACATGGGTACAGAGGGGACAA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CAATGAATCAGAACAGATGCTGAGCCATAGGTCTAAATAGGATCCTGGAGGCTGCCTGCTGTGCTGGGAGGTAT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 AGGGGTCCTGGGGGCAGGCCAGGGCAGTTGACAGGTACTTGGAGGGCTCAGGGCAGTGGCTTCTTTCCAGTATG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GAAGGATTTCAACATTTTAATAGTTGGTTAGGCTAAACTGGTGCATACTGGCATTGGCCCTTGGTGGGGAGCAC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 AGACACAGGATAGGACTCCATTTCTTTCTTCCATTCCTTCATGTCTAGGATAACTTGCTTTCTTCTTTCCTTTA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CTCCTGGCTCAAGCCCTGAATTTCTTCTTTTCCTGCAGGGGTTGAGAGCTTTCTGCCTTAGCCTACCATGTGAA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 ACTCTACCCTGAAGAAAGGGATGGATAGGAAGTAGACCTCTTTTTCTTACCAGTCTCCTCCCCTACTCTGCCCC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TAAGCTGGCTGTACCTGTTCCTCCCCCATAAAATGATCCTGCCAATCTAATGTGAGTGTGAAGCTTTGCACACT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 AGTTTATGCTACCTAGTCTCCACTTTCTCAATGCTTAGGAGACAGATCACTCCTGGAGGCTGGGGATGGTAGGA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TTGCTGGGGATTTTTTTTTTTTTAAACAGGGTCTCACTCTGTTGCCCAGGCTAGAGTGCAATGGTGCAATCACA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GCTCACTGCAGCCTCAACCTCCTGGGTTCAAGCAATCCTCCTACCTCAGCCTCCTGGGTAGCTAGCACCATGGC 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 ATGCGCCACCATGCCCTATTTTTTTTTTTTAAAGACAGGGTCTTGCTATATTGCCCAGGCTGGTCTTGAACTGG 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 GCTCAAGTGATCCTCACGCCTTGGCCTCCCAAAGTGCTGGGATTATAGGCATGAGCCACTGTGCTTGGCCAGGA 3552
Query 1 ----------------------ATGGAGTCTCATTC-TGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGC 51
|||||||.||..|| |||.|.||||.||||||||.|.|||..||||||||||
Sbjct 3553 TTTTTTTTTTTTTTTTTTTGAGATGGAGTTTCTCTCTTGTTGTCCAGGCTGGAGTGCAATGGTGTGATCTCGGC 3626
Query 52 TCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAG--- 122
|||||||||||||.||||..||.|.|||||.||.|||||||||||.||||||..|||||||||||||||||
Sbjct 3627 TCACTGCAACCTCCGCCTTCCGGGTTCAAGTGACTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGATTACAGATC 3700
Query 123 -GCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGC 195
||| |.|||||||||.||||| ||||||||||||||||||||.||||||||.|||||||||.|||||
Sbjct 3701 TGCA----CCACCATGCCCAGCTAA----TTTTGTATTTTTAGTAGAGACGGGGTTTCTCCATGTTGGTCAGGC 3766
Query 196 TGGTCTCGAACTCCTGACCTCAAG-------------------------------------------------- 219
||||||||||||||||||||||||
Sbjct 3767 TGGTCTCGAACTCCTGACCTCAAGTGATCTGTCCACCTCGGCCTCCCAGAGTGCTGGGATTACAGGCGTGAGCC 3840
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3841 ACTGTTCCCAGCAGGAATTTCTTTTTTATAGTATTGGATAAAGTTTGGTGTTTTTACAGAGGAGAAGCAATGGG 3914
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3915 TCTTAGCTCTTTCTCTATTATGTTATCATCCTCCCTTTTTTGTACAATATGTTGTTTACCTGAAAGGAAGGTTT 3988
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3989 CTATTCGTTGGTTGTGGACCTGGACAAAGTCCAAGTCTGTGGAACTTAAAACCTTGAAGGTCTGTCATAGGACT 4062
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4063 CTGGACAATCTCACACCTTAGCTATTCCCAGGGAACCCCAGGGGGCAACTGACATTGCTCCAAGATGTTCTCCT 4136
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4137 GATGTAGCTTGAGATATAAAGGAAAGGCCCTGCACAGGTGGCTGTTTCTTGTCTGTTATGTCAGAGGAACAGTC 4210
Query 220 ------------------------------------------------------------- 219
Sbjct 4211 CTGTTCAGAAAGGGGCTCTTCTGAGCAGAAATGGCTAATAAACTTTGTGCTGATCTGGAAA 4271
