Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12783
Subject:
XR_001749803.1
Aligned Length:
2655
Identities:
193
Gaps:
2439

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CTCAGGAGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACGACACCCGGCCTAGGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTCCTTCTTTAAAGACAAATTTCCAGTGGGGCTCTGTAAGTAATCCTCATATTTTCTCGTTGAGGAGTGTGGCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGAGAAGGTGAGTCTTCTGCACGTAGCAGGGGGGAAATGGTCAGGAGATACTGTAAAAGCACTAAGAAAACCGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AAGGAAAAGGCCAGGCTCCAGGAGCACAGAGACTGGATGGATTCCTGCTTCCCTGTCACTCGGCTCTGTTCAGG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CGGTGCAGTCACTTCCTTCACCTCAGTGTCCCTGTTTGTGCAAATGAGGTGACTATTGGTGCCGACCTACTTCC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CAGGCAGTTTTGAAGAGAAGTGGCAAACGTTGAAGGGCGCACACTCTCCTTCCCCAAGCTCCCTCCCTCCCCAC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GTGTGCACCCAGAAGGAAATAAAAGCCGTAATTTGCACTGGCGAGTCGGCCCGCCTCGTCGAGGGTTCCGCTGA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GCTGCTCACAAGGGCGTGCGGAGGCCCGCGGCCGGCCCTGGCCCCTGTGGTGGCAGCAGCTGGCTGGCTTCCCG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GGCGGCTACCTCCAGCTGCAGCTGTCGGTGCTATTTGCAGCTCTCCACATCCTGAGAGCTGGACGCCGAGGACC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GCTCCCTGGAGGGCGTGCGTAAAATGCAGCAGCGGAGCGGTGAGGAGATTACCGGAAAAACTGGGAGCGGAGTC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AGGCTCGTTCTGGAGCAGGGAGAGGCTTGGGAAGTTGCGAAACGTTGACCTGCAGGGTCTTGAGGAACTGTCGG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CCTGGGCTGTCCCCGTGGGTCATTGAACATTAATCAGCCACCAGTCCTCGACCAAGCCAACCGAAATAGAGTCA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GCAGGCAGAATGACGAATACAGTTTGAAAGGGAACGAACTTACTCTTATTCTCTCCTTGGAAAGGCCTTTCCAG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  ACTCTCGAACTCACCCCTGTCACATTACCCTGTTGTGTTATCTTTGTGGGCCTGCGCAGCACCTGAAATGATCT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GTCTTAGAGATGGGGTCTCACTGTGTTGCCGAGGATGGAGTACAGTGGCTATTCACAGGCACAGTCATTGTGCA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CTACATCCTGGAACTCCTGGGCTTAAGCAATCCTTCTGCCTCAGCCTCCCAAGTAGCTGGGACTATAGACACAC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  ACCACCACACTCAGCAAAAGTGACAATTGTTTCTAATACAGACATCCACACCTGGACATACTGTGAAAATTATA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TTCATTGGGCATATTAGTGTCCGTTCTTTCCAAGATCTGAGTTCATAATGTTTTCTTCTGTAATTGTAATGAAA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TATCACCATTTCTTGCTAGCATTATACCAAATCCCTCTAGGCAACTGGGTAGCAGGCTATATGCCAACCTAGGT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TTTTGGAGATGACTTGTATCTTGTTTGCTATTAGAGCCAACATGTTAGAATTTGTGATTTGTCACAGAGTAGAA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GACGAGTTCACTCAAGAAGCACTTATTTATGAGCACCTACACAGGTGATAGAACAGTCAAAAGACAGGAGTTCT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GGCCCTTCTGGAACTGACAATCTTACTAGAAAAATAAATGTTACCACATCACTTGAACAAAGGCACAATTATGC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  AATTTGAGTTGTGTTTTGACTTCCTTCCCACTACCTTGTTTTTTTGTTTTTGTTTTTTGTTTGTTTTGTTTTGT  1702

Query    1  -------------------------ATGGAGTCTCATTC-TGTCGCCCAGACTGGAGTGAAGTGGCATGATCTC  48
                                     |||||||.|...|| ||||.|||||.||||||||...|||||.||||||
Sbjct 1703  TTTTATGCTGGAGGTGTTGTGGGAGATGGAGTTTTGCTCTTGTCACCCAGGCTGGAGTGTGATGGCACGATCTC  1776

Query   49  GGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACA  121
            .||||||||||||||||||||| |.||| |||||.||||||||||||.|.||||||.|||||||||||||||||
Sbjct 1777  AGCTCACTGCAACCTCTGCCTC-CCAGGTTCAAGTGATTCTCCTGCCCCAGCCTCCTGAGTAGCTGGGATTACA  1849

Query  122  GGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGC  195
            ||||.||||.||||.||||||||||  |||||||||||||.|||||||||||||||||||||||||.|.|||||
Sbjct 1850  GGCATACGCCACCACGCCCGGCTAA--TTTTTTGTATTTTCAGTAGAGATGGGGTTTCACCATGTTAGTCAGGC  1921

Query  196  TGGTCTCGAACTCCTGACCTCAAG--------------------------------------------------  219
            ||||||||||||||||||||||.|                                                  
Sbjct 1922  TGGTCTCGAACTCCTGACCTCAGGTGATCTGCCTGCCTCAGCTTCCCAAAGTGCTGGGATTACAGGTGTGAGCC  1995

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1996  ACTGCACCCGGCCCCTCCTTGCTGTCTTAATAGAAAGTGGAAAATAGAAATCTTCTGCACAAGGCCTTTGGTTT  2069

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2070  GAATGCAACATGCCTAGAGATAGGGAACTGGAATCCAACACCGTTGCCTACAGATCTTTGGAGACTAAAAGAGA  2143

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2144  AAAAATCCAGGAAAGAAAAAAAAAAAAACAAAAAACGGCTGCCATAGCTATTGGCCTCATTGGACAGGCCTGGG  2217

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2218  TGATGTGCACAGACCCTAAAGGTGGCCGGAGCTGACCAGCTTCCTATTGCACTCTTCTGGGTGGCCCAGGCACC  2291

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2292  CAGTTGCATTGGCTGTGGCCACTGAGAAAGGATTGAGTCAGGCTGAGCCATGGGCAATGACAGAGGAGAGGGGA  2365

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2366  TCAGCAGAGCCTACCTGAAAGCAAAGGAGAAATGGGTCGGTCACCTCATCGCAGAATTTACAGATGAAGGGGAC  2439

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2440  AAACTTGTTACCTGAGGGTTTCCTTCATGCCTTGGAGTTTCTCTGAAAGAAAAGACAGCTGAGCATTTGCCCTG  2513

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2514  TTTTTGTTTTACCATTTTTACACTTTCGAAGTCATGCCATCAAGTTTTAAGCTAGTAAGAGGACCATATACCGA  2587

Query  220  -----------------------------------------------------------------  219
                                                                             
Sbjct 2588  ATGGTACAATATCATAGTTCTTGTAGCAGCTACATTTTGATGAATAAAATTTCTTTTAAAATCTC  2652

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