Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- XR_001753751.1
- Aligned Length:
- 4748
- Identities:
- 188
- Gaps:
- 4533
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTATATTGAAACATTACAACCATCTTTTGATGGCAACACCCTGAGGACCTCCCTTTTCCAGATGGGGAAACTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGCCCAGAATTGCTAAGTGGCTTGCTTGAGTTGACACAGGGAGCTCCAGGACTCACCCTCAGCTGAGCCACCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCGGGAGCATGCCTCTGCGCCACTGGGGGATGGCCAGGGGCAGTAAGCCCGTTGGGGATGGAGCCCAGCCCAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGCTGCCATGGGAGGCCTGAAGGTGCTTCTGCACTGGGCTGGTCCAGGCGGCGGGGAGCCCTGGGTCACTTTCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTGAGTCATCGCTGACAGCTGAGGAAGTCTGCATCCACATTGCACATAAAGTTGGTATCACTCCTCCTTGCTTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AATCTCTTTGCCCTCTTCGATGCTCAGGCCCAAGTCTGGTTGCCCCCAAACCACATCCTAGAGATCCCCAGAGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGCAAGCCTGATGCTATATTTCCGCATAAGGTTTTATTTCCGGAACTGGCATGGCATGAATCCTCGGGAACCGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTGTGTACCGTTGTGGGCCCCCAGGAACCGAGGCATCCTCAGATCAGACAGCACAGGGGATGCAACTCCTGGAC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCAGCCTCATTTGAGTACCTCTTTGAGCAGGGCAAGCATGAGTTTGTGAATGACGTGGCATCACTGTGGGAGCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTCGACCGAGGAGGAGATCCACCACTTTAAGAATGAGAGCCTGGGCATGGCCTTTCTGCACCTCTGTCACCTCG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTCTCCGCCATGGCATCCCCCTGGAGGAGGTGGCCAAGAAGACCAGCTTCAAGGACTGCATCCCGCGCTCCTTC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CGCCGGCATATCCGGCAGCACAGCGCCCTGACCCGGCTGCGCCTTCGGAACGTCTTCCGCAGGTTCCTGCGGGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTTCCAGCCGGGCCGACTCTCCCAGCAGATGGTCATGGTCAAATACCTAGCCACACTCGAGCGGCTGGCACCCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCTTCGGCACAGAGCGTGTGCCCGTGTGCCACCTGAGGCTGCTGGCCCAGGCCGAGGGGGAGCCCTGCTACATC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CGGGACAGTGGGGTGGCCCCTACAGACCCTGGCCCTGAGTCTGCTGCTGGGCCCCCAACCCACGAGGTGCTGGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GACAGGCACTGGTGGCATCCAGTGGTGGCCAGTAGAGGAGGAGGTGAACAAGGAGGAGGGTTCTAGTGGCAGCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GTGGCAGGAACCCCCAAGCCAGCCTGTTTGGGAAGAAGGCCAAGGCTCACAAGGCAGTCGGCCAGCCGGCAGAC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGGCCGCGGGAGCCACTGTGGGCCTACTTCTGTGACTTCCGGGACATCACCCACGTGGTGCTGAAAGAGCACTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGTCAGCATCCACCGGCAGGACAACAAGTGCCTGGAGCTGAGCTTGCCTTCCCGGGCTGCGGCGCTGTCCTTCG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGTCGCTGGTGGACGGCTATTTCCGCCTGACGGCCGACTCCAGCCACTACCTGTGCCACGAGGTGGCTCCCCCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CGGCTGGTGATGAGCATCCGGGATGGGATCCACGGACCCCTGCTGGAGCCATTTGTGCAGGCCAAGCTGCGGCC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CGAGGACGGCCTGTACCTCATTCACTGGAGCACCAGCCACCCCTACCGCCTGATCCTCACAGTGGCCCAGCGTA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GCCAGGCACCAGACGGCATGCAGAGCTTGCGGCTCCGAAAGTTCCCCATTGAGCAGCAGGACGGGGCCTTCGTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CTGGAGGGCTGGGGCCGGTCCTTCCCCAGCGTTCGGGAACTTGGGGCTGCCTTGCAGGGCTGCTTGCTGAGGGC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CGGGGATGACTGCTTCTCTCTGCGTCGCTGTTGCCTGCCCCAACCAGGAGAAACCTCCAATCTCATCATCATGC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GGGGGGCTCGGGCCAGCCCCAGGACACTCAACCTCAGCCAGCTCAGCTTCCACCGGGTTGACCAGAAGGAGATC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ACCCAGCTGTCCCACTTGGGCCAGGGCACAAGGACCAACGTGTATGAGGGCCGCCTGCGAGTGGAGGGCAGCGG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GGACCCTGAGGAGGGCAAGATGGATGACGAGGACCCCCTCGTGCCTGGCAGGGACCGTGGGCAGGAGCTACGAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TGGTGCTCAAAGTGCTGGACCCTAGTCACCATGACATCGCCCTGGCCTTCTACGAGACAGCCAGCCTCATGAGC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CAGGTCTCCCACACGCACCTGGCCTTCGTGCATGGCGTCTGTGTGCGCGGCCCTGAAAATATCATGGTGACAGA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GTACGTGGAGCACGGACCCCTGGATGTGTGGCTGCGGAGGGAGCGGGGCCATGTGCCCATGGCTTGGAAGATGG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TGGTGGCCCAGCAGCTGGCCAGCGCCCTCAGCTACCTGGAGAACAAGAACCTGGTTCATGGTAATGTGTGTGGC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CGGAACATCCTGCTGGCCCGGCTGGGGTTGGCAGAGGGCACCAGCCCCTTCATCAAGCTGAGTGATCCTGGCGT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GGGCCTGGGCGCCCTCTCCAGGGAGGAGCGGGTGGAGAGGATCCCCTGGCTGGCCCCCGAATGCCTACCAGGTG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GGGCCAACAGCCTAAGCACCGCCATGGACAAGTGGGGGTTTGGCGCCACCCTCCTGGAGATCTGCTTTGACGGA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GAGGCCCCTCTGCAGAGCCGCAGTCCCTCCGAGAAGGAGCATTTCTACCAGAGGCAGCACCGGCTGCCCGAGCC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CTCCTGCCCACAGCTGGCCACACTCACCAGCCAGTGTCTGACCTATGAGCCAACCCAGAGGCCATCATTCCGCA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CCATCCTGCGTGACCTCACCCGGCTGCAGCCCCACAATCTTGCTGACGTCTTGACTGTGAACCCGGACTCACCG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GCGTCGGACCCTACGGTTTTCCACAAGCGCTATTTGAAAAAGATCCGAGATCTGGGCGAGGGTCACTTCGGCAA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GGTCAGCTTGTACTGCTACGATCCGACCAACGACGGCACTGGCGAGATGGTGGCGGTGAAAGCCCTCAAGGCAG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 ACTGCGGCCCCCAGCACCGCTCGGGCTGGAAGCAGGAGATTGACATTCTGCGCACGCTCTACCACGAGCACATC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 ATCAAGTACAAGGGCTGCTGCGAGGACCAAGGTGGGCGGGACCCGGCGAGTCCTAGAGACTTGAGGGGGCGTGG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TTAGAGCGTGGGTGTGGCCTTGTGGGCGGGGCCAGTCTGGCCTAGCCAATTAGAGACTCTCAACCCCAGGCTGC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 AGTACGCGGTTCTTGGCATCTGGGTGAGCGTGGCTGGGCTGCCTCCTTCCCATCTGGGGGGTGCTACCTGCTGG 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 GGCCAGGATGGACGGGAGCCACCAGCAGCTCCCTCAAGTGAGAATGGGGTTCTGGATGGGTCCATCCCACCTGA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GAACTGGGTCTAGTGTGCGCGGGTCTTGGCCTTCCCTCCCGACCTTGGAGGGGCTCTGCTGGGCTCAAGGTAGG 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 CGGTCCCCGGCCCGCCCTCTATCGTCCCCCACCGGGGCCGCCCCTCTCCGCGGCAGGCGAGAAGTCGCTGCAGC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 TGGTCATGGAGTACGTGCCCCTGGGCAGCCTCCGAGACTACCTGCCCCGGCACAGCATCGGGCTGGCCCAGCTG 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 CTGCTCTTCGCCCAGCAGATCTGCGAGGGCATGGCCTATCTGCACGCGCAGCACTACATCCACCGAGACCTAGC 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 CGCGCGCAACGTGCTGCTGGACAACGACAGGCTGGTCAAGATCGGGGACTTTGGCCTAGCCAAGGCCGTGCCCG 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 AAGGCCACGAGTACTACCGCGTGCGCGAGGATGGGGACAGCCCCGTGTTCTGGTATGCCCCAGAGTGCCTGAAG 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 GAGTATAAGTTCTACTATGCGTCAGATGTCTGGTCCTTCGGGGTGACCCTGTATGAGCTGCTGACGCACTGTGA 3848
Query 1 ----------------------ATGGAGTCTCATTC-TGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGC 51
|||||||.|||..| |||..|||||.||||||||.|.|||||..||||||||
Sbjct 3849 CTCCAGCCAGAGCCCCCCCACGATGGAGTTTCACACTTGTATCCCAGGCTGGAGTGCAATGGCACAATCTCGGC 3922
Query 52 TCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGC 124
|||||||||||||.||||| |.||| |||..||||.||||||||||.||||||..|||||||||||||||.|||
Sbjct 3923 TCACTGCAACCTCCGCCTC-CCAGGTTCAGACGATCCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACGGGC 3995
Query 125 ACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGG 198
.|..||.|..||||||.||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3996 GCCTGCCATTATGCCCAGCTAA---TTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGG 4066
Query 199 TCTCGAACTCCTGACCTCAAG----------------------------------------------------- 219
|||||||||||||||||||.|
Sbjct 4067 TCTCGAACTCCTGACCTCAGGTGATCCACCCACCTCAGCCTTCCAAAGTGCTGGGATTACAGGCATGAGCCACC 4140
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4141 GTGCCTGCCTTTCATTGCCTCTTGAAAAGAGCTTGTCTTGTTTATACTGTAGAAATTCCTTGAGCTCATAGGCA 4214
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4215 TTGCTCAGGGTCAGATGACAGTTCTGAGACTCACTGAGTTGCTGGAACGAGGGGAGAGGCTGCCACGGCCCGAC 4288
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4289 AAATGTCCCTGTGAGGTCTATCATCTCATGAAGAACTGCTGGGAGACAGAGGCGTCCTTTCGCCCAACCTTCGA 4362
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4363 GAACCTCATACCCATTCTGAAGACAGTCCATGAGAAGTACCAAGGCCAGGCCCCTTCAGTGTTCAGCGTGTGCT 4436
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4437 GAGGCACAATGGCAGCCCTGCCTGGGAGGACTGGACCAGGCAGTGGCTGCAGAGGGAGCCTCCTGCTCCCTGCT 4510
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4511 CCAGGATGAAACCAAGAGGGGGATGTCAGCCTCACCCACACCGTGTGCCTTACTCCTGTCTAGAGACCCCACCT 4584
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4585 CTGTGAACTTATTTTTCTTTCTTGGCCGTGAGCCTAACCATGATCTTGAGGGACCCAACATTTGTAGGGGCACT 4658
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4659 AATCCAGCCCTTAAATCCCCCAGCTTCCAAACTTGAGGCCCACCATCTCCACCATCTGGTAATAAACTCATGTT 4732
Query 220 ------------ 219
Sbjct 4733 TTCTCTGCTGGA 4744
