Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12783
Subject:
XR_001753751.1
Aligned Length:
4748
Identities:
188
Gaps:
4533

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACTATATTGAAACATTACAACCATCTTTTGATGGCAACACCCTGAGGACCTCCCTTTTCCAGATGGGGAAACTG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGGCCCAGAATTGCTAAGTGGCTTGCTTGAGTTGACACAGGGAGCTCCAGGACTCACCCTCAGCTGAGCCACCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCCGGGAGCATGCCTCTGCGCCACTGGGGGATGGCCAGGGGCAGTAAGCCCGTTGGGGATGGAGCCCAGCCCAT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGCTGCCATGGGAGGCCTGAAGGTGCTTCTGCACTGGGCTGGTCCAGGCGGCGGGGAGCCCTGGGTCACTTTCA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GTGAGTCATCGCTGACAGCTGAGGAAGTCTGCATCCACATTGCACATAAAGTTGGTATCACTCCTCCTTGCTTC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AATCTCTTTGCCCTCTTCGATGCTCAGGCCCAAGTCTGGTTGCCCCCAAACCACATCCTAGAGATCCCCAGAGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TGCAAGCCTGATGCTATATTTCCGCATAAGGTTTTATTTCCGGAACTGGCATGGCATGAATCCTCGGGAACCGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CTGTGTACCGTTGTGGGCCCCCAGGAACCGAGGCATCCTCAGATCAGACAGCACAGGGGATGCAACTCCTGGAC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CCAGCCTCATTTGAGTACCTCTTTGAGCAGGGCAAGCATGAGTTTGTGAATGACGTGGCATCACTGTGGGAGCT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GTCGACCGAGGAGGAGATCCACCACTTTAAGAATGAGAGCCTGGGCATGGCCTTTCTGCACCTCTGTCACCTCG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CTCTCCGCCATGGCATCCCCCTGGAGGAGGTGGCCAAGAAGACCAGCTTCAAGGACTGCATCCCGCGCTCCTTC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CGCCGGCATATCCGGCAGCACAGCGCCCTGACCCGGCTGCGCCTTCGGAACGTCTTCCGCAGGTTCCTGCGGGA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CTTCCAGCCGGGCCGACTCTCCCAGCAGATGGTCATGGTCAAATACCTAGCCACACTCGAGCGGCTGGCACCCC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GCTTCGGCACAGAGCGTGTGCCCGTGTGCCACCTGAGGCTGCTGGCCCAGGCCGAGGGGGAGCCCTGCTACATC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CGGGACAGTGGGGTGGCCCCTACAGACCCTGGCCCTGAGTCTGCTGCTGGGCCCCCAACCCACGAGGTGCTGGT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GACAGGCACTGGTGGCATCCAGTGGTGGCCAGTAGAGGAGGAGGTGAACAAGGAGGAGGGTTCTAGTGGCAGCA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GTGGCAGGAACCCCCAAGCCAGCCTGTTTGGGAAGAAGGCCAAGGCTCACAAGGCAGTCGGCCAGCCGGCAGAC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AGGCCGCGGGAGCCACTGTGGGCCTACTTCTGTGACTTCCGGGACATCACCCACGTGGTGCTGAAAGAGCACTG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TGTCAGCATCCACCGGCAGGACAACAAGTGCCTGGAGCTGAGCTTGCCTTCCCGGGCTGCGGCGCTGTCCTTCG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TGTCGCTGGTGGACGGCTATTTCCGCCTGACGGCCGACTCCAGCCACTACCTGTGCCACGAGGTGGCTCCCCCA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CGGCTGGTGATGAGCATCCGGGATGGGATCCACGGACCCCTGCTGGAGCCATTTGTGCAGGCCAAGCTGCGGCC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CGAGGACGGCCTGTACCTCATTCACTGGAGCACCAGCCACCCCTACCGCCTGATCCTCACAGTGGCCCAGCGTA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GCCAGGCACCAGACGGCATGCAGAGCTTGCGGCTCCGAAAGTTCCCCATTGAGCAGCAGGACGGGGCCTTCGTG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CTGGAGGGCTGGGGCCGGTCCTTCCCCAGCGTTCGGGAACTTGGGGCTGCCTTGCAGGGCTGCTTGCTGAGGGC  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CGGGGATGACTGCTTCTCTCTGCGTCGCTGTTGCCTGCCCCAACCAGGAGAAACCTCCAATCTCATCATCATGC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GGGGGGCTCGGGCCAGCCCCAGGACACTCAACCTCAGCCAGCTCAGCTTCCACCGGGTTGACCAGAAGGAGATC  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  ACCCAGCTGTCCCACTTGGGCCAGGGCACAAGGACCAACGTGTATGAGGGCCGCCTGCGAGTGGAGGGCAGCGG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GGACCCTGAGGAGGGCAAGATGGATGACGAGGACCCCCTCGTGCCTGGCAGGGACCGTGGGCAGGAGCTACGAG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TGGTGCTCAAAGTGCTGGACCCTAGTCACCATGACATCGCCCTGGCCTTCTACGAGACAGCCAGCCTCATGAGC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  CAGGTCTCCCACACGCACCTGGCCTTCGTGCATGGCGTCTGTGTGCGCGGCCCTGAAAATATCATGGTGACAGA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GTACGTGGAGCACGGACCCCTGGATGTGTGGCTGCGGAGGGAGCGGGGCCATGTGCCCATGGCTTGGAAGATGG  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TGGTGGCCCAGCAGCTGGCCAGCGCCCTCAGCTACCTGGAGAACAAGAACCTGGTTCATGGTAATGTGTGTGGC  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  CGGAACATCCTGCTGGCCCGGCTGGGGTTGGCAGAGGGCACCAGCCCCTTCATCAAGCTGAGTGATCCTGGCGT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GGGCCTGGGCGCCCTCTCCAGGGAGGAGCGGGTGGAGAGGATCCCCTGGCTGGCCCCCGAATGCCTACCAGGTG  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  GGGCCAACAGCCTAAGCACCGCCATGGACAAGTGGGGGTTTGGCGCCACCCTCCTGGAGATCTGCTTTGACGGA  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  GAGGCCCCTCTGCAGAGCCGCAGTCCCTCCGAGAAGGAGCATTTCTACCAGAGGCAGCACCGGCTGCCCGAGCC  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  CTCCTGCCCACAGCTGGCCACACTCACCAGCCAGTGTCTGACCTATGAGCCAACCCAGAGGCCATCATTCCGCA  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  CCATCCTGCGTGACCTCACCCGGCTGCAGCCCCACAATCTTGCTGACGTCTTGACTGTGAACCCGGACTCACCG  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  GCGTCGGACCCTACGGTTTTCCACAAGCGCTATTTGAAAAAGATCCGAGATCTGGGCGAGGGTCACTTCGGCAA  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  GGTCAGCTTGTACTGCTACGATCCGACCAACGACGGCACTGGCGAGATGGTGGCGGTGAAAGCCCTCAAGGCAG  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  ACTGCGGCCCCCAGCACCGCTCGGGCTGGAAGCAGGAGATTGACATTCTGCGCACGCTCTACCACGAGCACATC  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  ATCAAGTACAAGGGCTGCTGCGAGGACCAAGGTGGGCGGGACCCGGCGAGTCCTAGAGACTTGAGGGGGCGTGG  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  TTAGAGCGTGGGTGTGGCCTTGTGGGCGGGGCCAGTCTGGCCTAGCCAATTAGAGACTCTCAACCCCAGGCTGC  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  AGTACGCGGTTCTTGGCATCTGGGTGAGCGTGGCTGGGCTGCCTCCTTCCCATCTGGGGGGTGCTACCTGCTGG  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  GGCCAGGATGGACGGGAGCCACCAGCAGCTCCCTCAAGTGAGAATGGGGTTCTGGATGGGTCCATCCCACCTGA  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  GAACTGGGTCTAGTGTGCGCGGGTCTTGGCCTTCCCTCCCGACCTTGGAGGGGCTCTGCTGGGCTCAAGGTAGG  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  CGGTCCCCGGCCCGCCCTCTATCGTCCCCCACCGGGGCCGCCCCTCTCCGCGGCAGGCGAGAAGTCGCTGCAGC  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  TGGTCATGGAGTACGTGCCCCTGGGCAGCCTCCGAGACTACCTGCCCCGGCACAGCATCGGGCTGGCCCAGCTG  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  CTGCTCTTCGCCCAGCAGATCTGCGAGGGCATGGCCTATCTGCACGCGCAGCACTACATCCACCGAGACCTAGC  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  CGCGCGCAACGTGCTGCTGGACAACGACAGGCTGGTCAAGATCGGGGACTTTGGCCTAGCCAAGGCCGTGCCCG  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  AAGGCCACGAGTACTACCGCGTGCGCGAGGATGGGGACAGCCCCGTGTTCTGGTATGCCCCAGAGTGCCTGAAG  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  GAGTATAAGTTCTACTATGCGTCAGATGTCTGGTCCTTCGGGGTGACCCTGTATGAGCTGCTGACGCACTGTGA  3848

Query    1  ----------------------ATGGAGTCTCATTC-TGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGC  51
                                  |||||||.|||..| |||..|||||.||||||||.|.|||||..||||||||
Sbjct 3849  CTCCAGCCAGAGCCCCCCCACGATGGAGTTTCACACTTGTATCCCAGGCTGGAGTGCAATGGCACAATCTCGGC  3922

Query   52  TCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGC  124
            |||||||||||||.||||| |.||| |||..||||.||||||||||.||||||..|||||||||||||||.|||
Sbjct 3923  TCACTGCAACCTCCGCCTC-CCAGGTTCAGACGATCCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACGGGC  3995

Query  125  ACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGG  198
            .|..||.|..||||||.|||||   |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3996  GCCTGCCATTATGCCCAGCTAA---TTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGG  4066

Query  199  TCTCGAACTCCTGACCTCAAG-----------------------------------------------------  219
            |||||||||||||||||||.|                                                     
Sbjct 4067  TCTCGAACTCCTGACCTCAGGTGATCCACCCACCTCAGCCTTCCAAAGTGCTGGGATTACAGGCATGAGCCACC  4140

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4141  GTGCCTGCCTTTCATTGCCTCTTGAAAAGAGCTTGTCTTGTTTATACTGTAGAAATTCCTTGAGCTCATAGGCA  4214

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4215  TTGCTCAGGGTCAGATGACAGTTCTGAGACTCACTGAGTTGCTGGAACGAGGGGAGAGGCTGCCACGGCCCGAC  4288

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4289  AAATGTCCCTGTGAGGTCTATCATCTCATGAAGAACTGCTGGGAGACAGAGGCGTCCTTTCGCCCAACCTTCGA  4362

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4363  GAACCTCATACCCATTCTGAAGACAGTCCATGAGAAGTACCAAGGCCAGGCCCCTTCAGTGTTCAGCGTGTGCT  4436

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4437  GAGGCACAATGGCAGCCCTGCCTGGGAGGACTGGACCAGGCAGTGGCTGCAGAGGGAGCCTCCTGCTCCCTGCT  4510

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4511  CCAGGATGAAACCAAGAGGGGGATGTCAGCCTCACCCACACCGTGTGCCTTACTCCTGTCTAGAGACCCCACCT  4584

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4585  CTGTGAACTTATTTTTCTTTCTTGGCCGTGAGCCTAACCATGATCTTGAGGGACCCAACATTTGTAGGGGCACT  4658

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4659  AATCCAGCCCTTAAATCCCCCAGCTTCCAAACTTGAGGCCCACCATCTCCACCATCTGGTAATAAACTCATGTT  4732

Query  220  ------------  219
                        
Sbjct 4733  TTCTCTGCTGGA  4744

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