Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- XR_001754565.1
- Aligned Length:
- 4293
- Identities:
- 193
- Gaps:
- 4075
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCGGGACTACGCTACCCAGCATCCTCGGCGCGGCCCGGAGGCTATGCGACCCTGCGCGTCGCATCCCCTCGGTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GACTACACTCCCCAGAGTCCTCGGGAGTCGTCCAGGTACACGCCCCAGAATATTGGTCATAGCGGTCCACCCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GACTGCGCGACCCGGAATCCTTGGAAGGACTTCTCGGAAGGACTCCTCTCTGACAGGTGGGGCGAGCCTATGGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGTTTGGACGTGGAGGGATCCTTTCAGAACCGGCGATTTCTTTTATTTAGGTAGCCCTATACATACATTAAGCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TATTTTCCCATTTCTATGATATAGACAACACCTTTTTGCTTTTCTTCCACATCTTCACACTCCTTCAGGATCAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAACCTAAGCCACATGACTGGATGAGCCGTCACTTGGCCTTCATTCGGGTAGTGATGGTCCTCACTGTAGTGGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGTTTTGCCTCCAGATATGCTTGAATCACTGCATTTTGGGAATAACTTCAAATGCAAGTCCTTGATCTAAATAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACAGAGTGACGAGGGGCCTATGTATCTATACCACCTGTCTCCTGAGTATACACCAGGCCAGCATAATCAGCCTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGCAACTTCTGGTTGGAAAGCTTTAAACATAAATTTACAAATAACATTGTCAGTGTCCTCTTTTTTCTTTTTTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTCCCTCAATTTGTCTTTCAGTAGTGACATAATATTCTTCACTGTGGCTTCTTCCATTGTGACCCAGACCAATC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TACTTAAGGTCCGCAAATACTGCTCACGTTCTCCCATGAAGTCCATCATGTGGGGAGTGTTTTCCTTGTAGGAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TACGCTGCTCTCAAGTGCATACATGATGATCTTTTTGTCCAAGCATCAGAGGTGATCCCAGCATCTTCACAGTA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCAGCCTTTCCCCAAGATCCTCGCCAGAGAAAAGGGTTACCCAGATCATCCTGCCACTGGTGAGTTGCTTTGTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GTCATGTACTGGGTGGACCTTATCATCTCATCCTCTTCATCCCTGTTATGGACGTATAACCCAGTCATCCTGAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CATCTAGAACCTTGTAGCCTGTGTCTATGCCACTCTCGTTCCATTGGTACAAATCCGCTCTGATAAAAGAATAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTAATATTCTCCAAAAAATGGAATTAAAGTGCTATAATTTTTTAATGTGTTGGTGATGAAAAATATTTCTAAAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATTAGTCTCATTCTATAGTTAAATTGTTCAAGTAGCCCCAGATTTAGCTTACTGAGTTTAAATAAAATGCGTGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AATTACACTTTTATTATATTTTTATGCTTCTGAAACTGAGGCATCTAAGGACTATGTAGTTTCTTCAGTTCAAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GTTCACCATAGATTGACATTTCAGATATCAAGTCTTTTGCACTTTTATTTTTATGTTAACTTTGTACAAGAAAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGTTTCTCTCTTTTTGAAGTACATTCTTAAAAAATTTGTTTTGGTAATCAAATCTCTCAATGTTTTTACTTTTG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AAAATATTTACTTACTCTGTTTATGAATGATACTTTAGCTAAATATTCAATTCTAGCTTTTAAGCCATGCTTGC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TCATTGTAACCTCCCTGACTAAAAAAAATTATGTCAATTTGGATTTTAAATTTAATCTAGAATTCATTTTAAAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGTTTTAAATGAAATTTATATGTGGCTAGATACTGTTTTGGTAATACTCGATAGTTTCCCGCCTCTATTGGGAT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ATTATTGACAAAAATTTTGTATATTTATGGTGCACAATATGATGTTTTGAGGTATAGACACGTGCACGCAGACA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CATAAACACACACACACACACACATTGTAAAATTACCAAAATCAAGCTTAATAACATGTCAATTACTTCTCATA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CAAGGGTATTTTTGGTGTATGGTGAGAACATTTGAGATCTACTTCATTAATATAATTTACTTATACAATACATA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TTATTAATATAGTCTCTATGCTGTATACATATATTTATATTAACTTCTCTTTTGTTATTGTTGGAGACAGTTGT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CTGTCTTTGTTCCCCAGGCTGGAGTGCAGTGGCATTATCATAGCTCACTGAAACGTCAAACTCCTGGGTTCAAA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TCATTCTCCCACCTCAGCCTCAAAAGTAGCTAGAACTACAGGGGTGCACCACTATGCCAAGCTAATTTGTAGGA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ACAGAGTCTTGCTATGTTACCCAGGCTGGTCTTGAACTCCTGGCCTCAAGCAATCCTCCTGCCTTAGCCTCCCA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AAATACAGGGATTATAGGCATGAGCCACATGCCTAGCTTTATAACATTTTCTTTATTCATTTATGTGTTGATGG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 ACATTTACATTGTTTTCATATCTTGTCTATTGTGAATATTGCTTCAAGAAACATAGGAGTGAAGATATCTCTTC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AATATGTGATTTTATGTTCTTTGGATATTTAACCATAGGTAGGATTCCTGAATCATATGATAGTTTTATTTTTA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ATTTTTTGATGAATAATCATGCTGTTTTCCATAATGGCTTTACCAATTTACATTCCCAGTGACAGTGTACAAGG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TTCCTTTTCTCTCCATCATTGATAACATTTGTTTTCTTTTGAATTTTTAATAAACATTACCCTAACATGTGCTT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GAGGTGCTATCTCATTTTGGTTTTGATTTGCATTCTCCTGATGATTACTAATGGCTTCTTTGAAAAAGGATCCA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TTTAGATTATTTGGCTACTTTTAAAAAGAATGTGTTATTTTTATTGTTATTTTTATTCAGAGGGGGTTATATTT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TATGAATTTCTTACAGATTTTGAATGCTAACCCTTTATCTGATATTTGGCTTACAAGTATTTTTCTTCGGTTCT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GTGGATTGCCTTTTAAATTGATTGACTGTCTTTTGCTATGCAGTAGAAACTTTTTAGTTTGATGTCGTTTCATT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TTTTTTCTCCCTGGGCTTTTAGTGTCAAATACAAAAAATAATTATTGCCGCAAACAATGCCAAAGAATTTTCCC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CAATGTTGTTTTCTAAAAGTTTTATGGTTTCAGGTCCAATATTGAAGTCTTTAATCTCTTAAGTTAATTTTTGT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GTATTCTGTAAAAGATGGGTTAAATTTTTTTTGCATGTGTATATCCAGTTTTCCCATCACCATTTATTGAACAG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TGTATTCTTTCTTCACTGTATATTTATATATCTTTGTTGAAAATTAGTTGACTGTGTTCAGATGGATATTTCTG 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 AGCTCTCTATTCAGTTTCATTGGTCTATGTGTCTGTGTTAATGCCAGCATCATGCTGTTTTGATGACTGTAGCT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TTGTTATATCATTTGAAATTAAGAAGTTTGATGCCTTCAGCTTTGTTCTTGCTCAAAATTCTTTGGTTATTTTG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GGTCTTTTCTAATTCCTTACAAACTTTAGAAATTTTTTATTTTTCTGGAAAATGATATTTTAATTTTGATGGAG 3404
Query 1 --------------------------------ATGGAGTCTCATTCTGTC-------GCCCAGACTGGAGTGAA 35
|||||||||||.|.|||| ||||||.||||||||.|
Sbjct 3405 ATTGCTTTAAATTTTTTTTTTTTTTTTTTGAGATGGAGTCTCACTGTGTCACCCAGGGCCCAGGCTGGAGTGCA 3478
Query 36 GTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGT 108
|||...|||||||.|||||||||||||||..||| ||..|| ||||.|.||||.||||.|||.||||||.||||
Sbjct 3479 GTGAGGTGATCTCAGCTCACTGCAACCTCCACCT-TCCTGGTTCAAACAATTCCCCTGACTCAGCCTCCTGAGT 3551
Query 109 AGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTT-TGTATTTTTAGTAGAGATGGGGTTTCAC 181
|||||||||||||||..|||||.||||||||.||||||||||||| |||.||||||||||||||||||||||||
Sbjct 3552 AGCTGGGATTACAGGTGCACGCCACCATGCCTGGCTAATTTTTTTGTGTGTTTTTAGTAGAGATGGGGTTTCAC 3625
Query 182 CATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------------------------------------ 219
||||||||||||.||||||.||||||||||||||||||
Sbjct 3626 CATGTTGGCCAGACTGGTCACGAACTCCTGACCTCAAGCAATCCACCCACCTCGGCCTCCCAAAGTGCTAGGAT 3699
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3700 TACAGGTGTGAGCCACTGCACCCGGTGAGATTGCTTTAAATCTTTATATCACTTTTAGTAGTATGAATGTTTTA 3773
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3774 ATATTAATTTATCCAATCCATGAACACTAAGTTTTTTTTGTCTCTTCTATAATTGCCTTTGCCACTATTTTAGA 3847
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3848 GTTTTTATTGTACAAATCTTTTACCGTCTTAGTTATAAGTATTATTTTTTATGTTATGGCATATGGAATTTTCT 3921
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3922 TAATTTTTCCCATATATTTTGTTGTAAGTGTATAGAAATGCAATTTATTGTTTTGTACATTGATATAGTATCCT 3995
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3996 GCAACATTGCTGAATTAGTTTATTAGTTTTAAAAGTTTTTTTCCTGTAATGATGAGCACACGGGACTGTGTTTA 4069
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4070 CACACTCATTAATATTCTGTTAACATATCACAGTGCCTAAAAATGTGCTCTGTTGTATTTCTGCGGTGACCAAT 4143
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4144 TTAATGGCATCTTTTAGTCCTAATTTTTTTTTCTTTTAAAATACTTTTGTCTGGTATTGTATAATGGTGTGTTA 4217
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4218 CTTTTCAGTTGTGCTACACATTTATTTCCAGGCAGAGTTAGTCAAGCTTTCTAATAAAGTTATTTAATACCTTT 4291
Query 220 - 219
Sbjct 4292 A 4292
