Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12783
Subject:
XR_001754567.1
Aligned Length:
3873
Identities:
193
Gaps:
3655

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACTACGCTACCCAGCATCCTCGGCGCGGCCCGGAGGCTATGCGACCCTGCGCGTCGCATCCCCTCGGTGGACTA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CACTCCCCAGAGTCCTCGGGAGTCGTCCAGGTACACGCCCCAGAATATTGGTCATAGCGGTCCACCCGGGACTG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CGCGACCCGGAATCCTTGGAAGGACTTCTCGGAAGGACTCCTCTCTGACAGGTGGGGCGAGCCTATGGTCGTTT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGACGTGGAGGGATCCTTTCAGAACCGGCGATTTCTTTTATTTAGTAGTGACATAATATTCTTCACTGTGGCTT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTTCCATTGTGACCCAGACCAATCTACTTAAGGTCCGCAAATACTGCTCACGTTCTCCCATGAAGTCCATCATG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGGGGAGTGTTTTCCTTGTAGGATTACGCTGCTCTCAAGTGCATACATGATGATCTTTTTGTCCAAGCATCAGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GGTGATCCCAGCATCTTCACAGTACCAGCCTTTCCCCAAGATCCTCGCCAGAGAAAAGGGTTACCCAGATCATC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CTGCCACTGGTGAGTTGCTTTGTTGTCATGTACTGGGTGGACCTTATCATCTCATCCTCTTCATCCCTGTTATG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GACGTATAACCCAGTCATCCTGAGCATCTAGAACCTTGTAGCCTGTGTCTATGCCACTCTCGTTCCATTGGTAC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AAATCCGCTCTGATAAAAGAATAGTTAATATTCTCCAAAAAATGGAATTAAAGTGCTATAATTTTTTAATGTGT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TGGTGATGAAAAATATTTCTAAAAATTAGTCTCATTCTATAGTTAAATTGTTCAAGTAGCCCCAGATTTAGCTT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ACTGAGTTTAAATAAAATGCGTGGAATTACACTTTTATTATATTTTTATGCTTCTGAAACTGAGGCATCTAAGG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ACTATGTAGTTTCTTCAGTTCAATGTTCACCATAGATTGACATTTCAGATATCAAGTCTTTTGCACTTTTATTT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TTATGTTAACTTTGTACAAGAAAATGTTTCTCTCTTTTTGAAGTACATTCTTAAAAAATTTGTTTTGGTAATCA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AATCTCTCAATGTTTTTACTTTTGAAAATATTTACTTACTCTGTTTATGAATGATACTTTAGCTAAATATTCAA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TTCTAGCTTTTAAGCCATGCTTGCTCATTGTAACCTCCCTGACTAAAAAAAATTATGTCAATTTGGATTTTAAA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TTTAATCTAGAATTCATTTTAAAGGGTTTTAAATGAAATTTATATGTGGCTAGATACTGTTTTGGTAATACTCG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  ATAGTTTCCCGCCTCTATTGGGATATTATTGACAAAAATTTTGTATATTTATGGTGCACAATATGATGTTTTGA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GGTATAGACACGTGCACGCAGACACATAAACACACACACACACACACATTGTAAAATTACCAAAATCAAGCTTA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  ATAACATGTCAATTACTTCTCATACAAGGGTATTTTTGGTGTATGGTGAGAACATTTGAGATCTACTTCATTAA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TATAATTTACTTATACAATACATATTATTAATATAGTCTCTATGCTGTATACATATATTTATATTAACTTCTCT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TTTGTTATTGTTGGAGACAGTTGTCTGTCTTTGTTCCCCAGGCTGGAGTGCAGTGGCATTATCATAGCTCACTG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  AAACGTCAAACTCCTGGGTTCAAATCATTCTCCCACCTCAGCCTCAAAAGTAGCTAGAACTACAGGGGTGCACC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  ACTATGCCAAGCTAATTTGTAGGAACAGAGTCTTGCTATGTTACCCAGGCTGGTCTTGAACTCCTGGCCTCAAG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CAATCCTCCTGCCTTAGCCTCCCAAAATACAGGGATTATAGGCATGAGCCACATGCCTAGCTTTATAACATTTT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CTTTATTCATTTATGTGTTGATGGACATTTACATTGTTTTCATATCTTGTCTATTGTGAATATTGCTTCAAGAA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  ACATAGGAGTGAAGATATCTCTTCAATATGTGATTTTATGTTCTTTGGATATTTAACCATAGGTAGGATTCCTG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  AATCATATGATAGTTTTATTTTTAATTTTTTGATGAATAATCATGCTGTTTTCCATAATGGCTTTACCAATTTA  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CATTCCCAGTGACAGTGTACAAGGTTCCTTTTCTCTCCATCATTGATAACATTTGTTTTCTTTTGAATTTTTAA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  TAAACATTACCCTAACATGTGCTTGAGGTGCTATCTCATTTTGGTTTTGATTTGCATTCTCCTGATGATTACTA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  ATGGCTTCTTTGAAAAAGGATCCATTTAGATTATTTGGCTACTTTTAAAAAGAATGTGTTATTTTTATTGTTAT  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TTTTATTCAGAGGGGGTTATATTTTATGAATTTCTTACAGATTTTGAATGCTAACCCTTTATCTGATATTTGGC  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TTACAAGTATTTTTCTTCGGTTCTGTGGATTGCCTTTTAAATTGATTGACTGTCTTTTGCTATGCAGTAGAAAC  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  TTTTTAGTTTGATGTCGTTTCATTTTTTTTCTCCCTGGGCTTTTAGTGTCAAATACAAAAAATAATTATTGCCG  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  CAAACAATGCCAAAGAATTTTCCCCAATGTTGTTTTCTAAAAGTTTTATGGTTTCAGGTCCAATATTGAAGTCT  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  TTAATCTCTTAAGTTAATTTTTGTGTATTCTGTAAAAGATGGGTTAAATTTTTTTTGCATGTGTATATCCAGTT  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  TTCCCATCACCATTTATTGAACAGTGTATTCTTTCTTCACTGTATATTTATATATCTTTGTTGAAAATTAGTTG  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  ACTGTGTTCAGATGGATATTTCTGAGCTCTCTATTCAGTTTCATTGGTCTATGTGTCTGTGTTAATGCCAGCAT  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  CATGCTGTTTTGATGACTGTAGCTTTGTTATATCATTTGAAATTAAGAAGTTTGATGCCTTCAGCTTTGTTCTT  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  GCTCAAAATTCTTTGGTTATTTTGGGTCTTTTCTAATTCCTTACAAACTTTAGAAATTTTTTATTTTTCTGGAA  2960

Query    1  --------------------------------------------------------ATGGAGTCTCATTCTGTC  18
                                                                    |||||||||||.|.||||
Sbjct 2961  AATGATATTTTAATTTTGATGGAGATTGCTTTAAATTTTTTTTTTTTTTTTTTGAGATGGAGTCTCACTGTGTC  3034

Query   19  -------GCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGA  84
                   ||||||.||||||||.||||...|||||||.|||||||||||||||..||| ||..|| ||||.|.|
Sbjct 3035  ACCCAGGGCCCAGGCTGGAGTGCAGTGAGGTGATCTCAGCTCACTGCAACCTCCACCT-TCCTGGTTCAAACAA  3107

Query   85  TTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTT-TGTA  157
            |||.||||.|||.||||||.|||||||||||||||||||..|||||.||||||||.||||||||||||| |||.
Sbjct 3108  TTCCCCTGACTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCACGCCACCATGCCTGGCTAATTTTTTTGTGTG  3181

Query  158  TTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------------  219
            ||||||||||||||||||||||||||||||||||||.||||||.||||||||||||||||||            
Sbjct 3182  TTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGACTGGTCACGAACTCCTGACCTCAAGCAATCCACCCAC  3255

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3256  CTCGGCCTCCCAAAGTGCTAGGATTACAGGTGTGAGCCACTGCACCCGGTGAGATTGCTTTAAATCTTTATATC  3329

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3330  ACTTTTAGTAGTATGAATGTTTTAATATTAATTTATCCAATCCATGAACACTAAGTTTTTTTTGTCTCTTCTAT  3403

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3404  AATTGCCTTTGCCACTATTTTAGAGTTTTTATTGTACAAATCTTTTACCGTCTTAGTTATAAGTATTATTTTTT  3477

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3478  ATGTTATGGCATATGGAATTTTCTTAATTTTTCCCATATATTTTGTTGTAAGTGTATAGAAATGCAATTTATTG  3551

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3552  TTTTGTACATTGATATAGTATCCTGCAACATTGCTGAATTAGTTTATTAGTTTTAAAAGTTTTTTTCCTGTAAT  3625

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3626  GATGAGCACACGGGACTGTGTTTACACACTCATTAATATTCTGTTAACATATCACAGTGCCTAAAAATGTGCTC  3699

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3700  TGTTGTATTTCTGCGGTGACCAATTTAATGGCATCTTTTAGTCCTAATTTTTTTTTCTTTTAAAATACTTTTGT  3773

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3774  CTGGTATTGTATAATGGTGTGTTACTTTTCAGTTGTGCTACACATTTATTTCCAGGCAGAGTTAGTCAAGCTTT  3847

Query  220  -------------------------  219
                                     
Sbjct 3848  CTAATAAAGTTATTTAATACCTTTA  3872

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