Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- XR_001755384.1
- Aligned Length:
- 4981
- Identities:
- 188
- Gaps:
- 4767
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGTGTCCAGGAGTCTCTCTGCTGCCAGCCCCGCCCAGACTCCAGGCAGGTTCTCGTTGCTATGGTGATCGCCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCAAGCTGGATGCTTGGACGCGCCGCTGCCAGTCCAACGCAGACCCCGCCCACGACGTCGACGATTCGTGTAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCGCAGGTCCCGCGTGGCTCTCGTTGCCATGGTGATCGCCGCCGCTGGCTCAGGCGGACCAGGCCGCGCGGAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCCCAGCTTTCACAGCCATCGCTGTGGTACACGCCGGAAGCCTGTTTGCAGCTCAGGGAGCACTTCCACGGGCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGTCAGCGCTGCCTGCCAACGCAGGAACACGGGGACTGTCGGGCTCAAACTCTCCAAGGTGGTGGTGGTTGGCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATCTCTACGTGGGGAAGACCAGCCTCATCCACAGGTTTTGCAAGAATGTTTTTGATCGAGACTACAAGGCCACC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATTGGGGTGGACTTTGAAATTGAGCGCTTTGAGATTGCTGGGATTCCCTATAGCCTCCAGATCTGGGACACAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGGGCAGGAGAAGTTCAAGTGCATCGCATCTGCCTACTACCGGGGTGCCCAGGTGATCATCACGGCCTTTGACC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCACTGACGTGCAGACCCTGGAGCATACCAGGCAGTGGTTGGAGGATGCTCTGAGGGAGAACGAGGCAGGCTCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGCTTCATCTTCCTCGTGGGAACCAAGAAGGACCTTCTGGCGAGAACGTGAAGGCATTCTTCAGCCGCGTAGCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCCCTGGCATTCGAGCAGTCGGTGCTGCAGGACCTGGAGAGGCAGAGCAGTGCCCGGCTCCAGGTCGGCAATGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGACCTAATCCAAATGGAAGGGAGTCCGCCCGAGACCCAGGAGAGCAAGAGGCCCTCCAGCCTGGGCTGCTGCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AACTGGGGCCTGCGTGGAAGGCCTCCGCTCCCTGCACACACACGGACAGGAATTTCCGTGACTGTGGTGTGGAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACTGGAGCCCAAGCTCTGCAGCGTGTCGCCCTCAAGCTGTAGGCCCATGTTCCAGTCCCTCCACCCACCCACCG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGCTCAGCTCCAGGGCACAGTCACTTGTCCGTTGCAGGTTGGGCACTAGAAAAGGCCCCCACTGGCTGCCTGGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGCCCCACACCACCGGGCCAGTGCAGGCACTGTGGTGATCCCATAAAAGGCCAGTCCATTTGCAGGGTCATCAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACAGTCACCTTTGGCCTCAAGAGGCCTCAGAACTGCAAACTCCTGCGTCGGTCTATACTACTCGGCCATGGCCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACATCAGCAGTCAACCCTGCACTCTTTCCCAGCGATCTTGGATGTGTCCCCAGGATCCGTCACAGTGTTCCAGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CAACCTGGACTTGTCAAAGTCAGCACCTGAAGGAGAGGCCACCTGCCATTCCCCCTGGGAGTTTTCTGTTGTCA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCAGGACTTATGGTTCTGGGTCTCAGAGCTTCAGGCCTCACTGTCCTTCTGCCACGGATGCTCAAGGTTCCTGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GCAGACCAGCACCTCTGGAGGACAATGGACAAAATGTCTCTTAGACCTGTTCTGGCTGAAGGGCTATCTCTGGC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ACCTCTGAGATCCCTAGGTCCTGCCCTCCTGGTCCGTGGGCCAGGATGTGCAGAACAACCACTCAGGCCTTTCT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGCCCACCTGGACAGTGCATTTACCTGTGTGCTGCGGGAGGCAGACTGCACAGCTGTCCTAGGGTAACTCACTC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGCAGCCCTTGAACATGGCACTGCCCTCCTCTGGCACTCATGCTGGGCCTGTGCCCACTGCTGCCTCTCCATCC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTCTCTCATTGGCCTATACATCTCTTAGGACCTTTGTAATGGTGTCCATGCACCTTTAGAGGACTTCAGAGGCC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CTGCCAAGTCTAGCATGTTCCTGTCTCCAACACCGCCTCCTGCACATGCAGAGCAGACAGAAATACCCCACACA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TTCCCCAGCCTCTCTGCCCAGTATGCTCATCCACAGGGTTTTCTCACTGCTATGAACCAGCCCCACAGCCCCAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GCCCCTGTCACCTGGCTATGCCCACTCATCCCACCCGTCTCGTGCTGTTGCTTCCCGTAGATGGCGAGCACCTT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GCAGGCAGCCTTCTGATCAGTACTGCTCTCCTAGGGCCTGGCACACTGCAGCTGCCCTGTAAATGTTCAGCTCA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GCGATTGCCAAATACCAGTTAGGGAAGAACACTGGCATCTTTTTCTATTCATTCCCCCTTCAACATATTTTTTG 2220
Query 1 -------------------------------------ATGGAGTCTCATTC-TGTCGCCCAGACTGGAGTGAAG 36
|||||||.|||..| |||.||||||.||||||||.|.
Sbjct 2221 TAGTTTTTTATATAAATGACTTTTTTTTTTTTTTGAGATGGAGTTTCACCCTTGTTGCCCAGGCTGGAGTGCAA 2294
Query 37 TGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTA 109
||||.|.|||||||||||.||||||||||||||| |.||| |.||||||||||||||||||.||||||..||||
Sbjct 2295 TGGCGTAATCTCGGCTCAGTGCAACCTCTGCCTC-CCAGGTTGAAGCGATTCTCCTGCCTCAGCCTCCCAAGTA 2367
Query 110 GCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCA 183
||||||||||||||||..|.|.||||||||.|||||| |||||||||||||||||||||||||||||.|||
Sbjct 2368 GCTGGGATTACAGGCATGCACCACCATGCCTGGCTAA----TTTTGTATTTTTAGTAGAGATGGGGTTTCTCCA 2437
Query 184 TGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-------------------------------------- 219
||||||.|||||||.|||||.||||||||.||||.|
Sbjct 2438 TGTTGGTCAGGCTGCTCTCGGACTCCTGATCTCAGGTGACCTGCCCACCTCGGCCTCCCGAAGTGCTGGGATTA 2511
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2512 CAAGGGTGAGCCACCATGCCCGGCCATAAATGATTTTATTCATTTTTATGTTTTCTTTTGGGCGGCGGGATGGA 2585
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2586 GTCTCTGTCACCCAGGCTGGCGTGCAATGGCACGATCTTGGCTCACTGCAAGCTTCCCCTTCCGGGTTCATGCC 2659
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2660 ATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACGTGTGACCATGCCGGGCTAATTTTTTATATT 2733
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2734 TTTAGTAGAGAGAGGTTTCACCGTGTTAGCCAGGATGGTCTCGATGATCTGACCTCGTGATCTGCCCGCCTCGG 2807
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2808 CCTCCCAAAGTGCTGGGATTACAGGCCTGAGCCACCGCGTCCGGCCTCCATAAATGACTTTTAAAGGGGTTGTA 2881
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2882 TGTTTAGTGTGAACAAAGACAGTACAAAGCATATAAAATACAAGGTGAAAGCCCCCCCCCCGCCACATTAGCTG 2955
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2956 CGCCCCTGAAGTGTCTCCAGCAGAAGAGATGGATGAATGGAAGGACACACAGATGGACAGAGAGCAGGAAAGAC 3029
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3030 TGTTAGCTCTGCTAACAGTCAGGACTATTCCTTCTGGACTCTGTGCCTTTGCCTGCACAGCTAGTGTTGATGGC 3103
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3104 TTGTTTGTTGTTTTCACCAGAGTGAGCTCCTTCTGGACATACTGCCTGGCAGCCTGCCTTCCTAGGGAGCTGGC 3177
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3178 GCCAAGGCCTCTCCCTGATGGCACACAAGGAGCCTCCTTCCTGTAGCAGCGCCCAGTTTTCATGTGGATGGATT 3251
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3252 GTAGTTCATTTGACCCTCCCCATCCGCGGGCCATCCGGCTTGTGTCCAGCTTTTAGCTCTTGCCAATGGTGCTG 3325
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3326 CAGTGGCCATTCTTGTAGTTATAGCTTTGCGTACTCAGGAAGGCCCTTCTCCCGACTGCGGCCCCCAGCCTGGT 3399
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3400 CCACTAAATGCAGCCTGTGGTCGGGCAGACAGCATTGGGGTCCATTAGGAAGACCAGGTTTGCTGGGCATAAGC 3473
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3474 TTCACAGGACGGGAGAACCTGCCCATGGTGGACTGTCGTTCTCCACAGCTCCCTTCCCTTGCCCCTTCGGGCCT 3547
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3548 CCAGGATATGTTTGCGGGGGTGGGTGTGGTGTCCAGCTGTTACCAGCTTCTGAGCTAGAGCTGTACTGCCTCAC 3621
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3622 GTACACCCCCACCTCTGTAAATGGTCCTTGATTAAATCGTCCTCATATTACCTCCTGCAATGTGCCAGCTGATT 3695
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3696 CCCACACACCCTGACTGACATAGTTGTGGCCTCTCGAACTTTGATATTTGGCCTGGGAGGACAGAAGAGTAAGG 3769
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3770 TCGCCACGGAAACGCAAGGGGCTCAGTTGTCCCCCCACCCCAAGTTGATGCAGCATCTTCTCGGTCAGAATTGC 3843
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3844 TTCAGGGTGGTTTGCGCACCCTCACTTTGATGATTTAATGAAGACATTTCCTTCTTTCCCAGCATCGGGCAGTA 3917
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3918 AGTTTCCTGGGCAGAGGCACTTTCTGTTGGTCTGGTCTTGTGGGCCCAGGCAAGCAGCCCCCTGCAGCCAAGGT 3991
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3992 GCGGCAATGACCACAGTGACCGCGTCCAAGTGCTGCCGAAACGCCTTTTTCCTCTTCCCTGTTTCCCTGGACCC 4065
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4066 TTTCCTGCTCTCTGTCCATCTGTGTGTCCTTCCGTTCACCTGTCTCTTCTGCTGGAGACACGTACCTGAAGCAG 4139
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4140 GTCCTCTCCTGTCACTTCCTGGCTCCCCAGGGCTAGGTCCCAGGGTGCTCTCGCTCTGGCTTTCGAGGCTCCTC 4213
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4214 ACCACCCAGCCCACCCCACCCCCACAGGCCCCTGTGCTCCAGTTTCATCCCTGGTCACAATGCAGTCTGCAGAT 4287
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4288 GCCAGACCCCTCTTCTGTGCCCAACGGCTGGGACACCCCTACTCCCAGAGAGGCCTCTGTGGACACCCCCACAG 4361
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4362 CTCTCGCAGCACTTGATACCTTGAGTGTGATTGGTCACATCTGGGCTTTCTCCCCCACCCATCTGTGGAACCCC 4435
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4436 AAGAGCCAGGACAGTGACCTCATCACCTCTACTGTCTCCCCTAGCACCTCTGGGAGGAAGGGCCCACAGTAGGT 4509
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4510 GCTCAATAGATGTGTAAAGAAGGCAGGGAAGCAAGAAGGTTGCTCAAACAAGACCATGTTCCCAGCAGACAGAT 4583
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4584 TGCACTCTGACCCAGATGCCACCACACGAAACTTACACCTGCCTGGGGAACAATCCTGTGCTTGGCTCTCCTTG 4657
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4658 GTGGCCAGGGACAGTTGTGCCTCATCCCTCACTTGCAAACCCCAGTCCTGTCTGACCCAGAGACCCTCACAGGG 4731
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4732 CATCAGCCAGTGAAGGCGGTTTGGGGCTGGAGGATATGTTCTGATCTTGGGAAGAGCTTGGTAGGAGCCAGCCA 4805
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4806 CAGAAAGTTTCAGGGCAGAACTGAACAGGTCTCGGGAAGGACACTTCATGCCAGCTAGAGAGGCTCTGGGCACA 4879
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4880 GGAAAGAATTGGACTTCGGGCAGAAAAATGTTTGTGCTATTTAGTACTATGTAACAAATCACTCCAAAACTTCA 4953
Query 220 ----------------------- 219
Sbjct 4954 TTGCTTAAAGCAACAAGCATGTA 4976
