Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- XR_001755387.1
- Aligned Length:
- 5091
- Identities:
- 188
- Gaps:
- 4877
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CAGGGTGTCCAGGAGTCTCTCTGCTGCCAGCCCCGCCCAGACTCCAGGCAGGTTCTCGTTGCTATGGTGATCGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGGTGCAAGCTGGATGCTTGGACGCGCCGCTGCCAGTCCAACGCAGACCCCGCCCACGACGTCGACGATTCGTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TAGCCCGCAGGTCCCGCGTGGCTCTCGTTGCCATGGTGATCGCCGCCGCTGGCTCAGGCGGACCAGGCCGCGCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGCCCCAGCTTTCACAGCCATCGCTGGACTGTGGAAGAATGAGGTCCTCCCTGACACCTTTGGGGCCCCCTGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAGCCGCGACCGTGTCATCGCCAGCTTCCCTAAGTGGTACACGCCGGAAGCCTGTTTGCAGCTCAGGGAGCACT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCCACGGGCAGGTCAGCGCTGCCTGCCAACGCAGGAACACGGGGACTGTCGGGCTCAAACTCTCCAAGGTGGTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTGGTTGGCGATCTCTACGTGGGGAAGACCAGCCTCATCCACAGGTTTTGCAAGAATGTTTTTGATCGAGACTA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAAGGCCACCATTGGGGTGGACTTTGAAATTGAGCGCTTTGAGATTGCTGGGATTCCCTATAGCCTCCAGATTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATCATCACGGCCTTTGACCTCACTGACGTGCAGACCCTGGAGCATACCAGGCAGTGGTTGGAGGATGCTCTGAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGAGAACGAGGCAGGCTCCTGCTTCATCTTCCTCGTGGGAACCAAGAAGGACCTTCTGTCAGGGGCCGCATGTG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGCAGGCCGAAGCAGACGCTGTGCACCTGGCCAGGGAGATGCAGGCCGAGTACTGGTCAGTGTCGGCCAAGACT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGCGAGAACGTGAAGGCATTCTTCAGCCGCGTAGCCGCCCTGGCATTCGAGCAGTCGGTGCTGCAGGACCTGGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GAGGCAGAGCAGTGCCCGGCTCCAGGTCGGCAATGGAGACCTAATCCAAATGGAAGGGAGTCCGCCCGAGACCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGGAGAGCAAGAGGCCCTCCAGCCTGGGCTGCTGCTAACTGGGGCCTGCGTGGAAGGCCTCCGCTCCCTGCACA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CACACGGACAGGAATTTCCGTGACTGTGGTGTGGAGACTGGAGCCCAAGCTCTGCAGCGTGTCGCCCTCAAGCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GTAGGCCCATGTTCCAGTCCCTCCACCCACCCACCGGGCTCAGCTCCAGGGCACAGTCACTTGTCCGTTGCAGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTGGGCACTAGAAAAGGCCCCCACTGGCTGCCTGGGAGCCCCACACCACCGGGCCAGTGCAGGCACTGTGGTGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCCCATAAAAGGCCAGTCCATTTGCAGGGTCATCAGACAGTCACCTTTGGCCTCAAGAGGCCTCAGAACTGCAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACTCCTGCGTCGGTCTATACTACTCGGCCATGGCCCACATCAGCAGTCAACCCTGCACTCTTTCCCAGCGATCT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGGATGTGTCCCCAGGATCCGTCACAGTGTTCCAGGCAACCTGGACTTGTCAAAGTCAGCACCTGAAGGAGAGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCACCTGCCATTCCCCCTGGGAGTTTTCTGTTGTCAGCAGGACTTATGGTTCTGGGTCTCAGAGCTTCAGGCCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CACTGTCCTTCTGCCACGGATGCTCAAGGTTCCTGGGCAGACCAGCACCTCTGGAGGACAATGGACAAAATGTC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCTTAGACCTGTTCTGGCTGAAGGGCTATCTCTGGCACCTCTGAGATCCCTAGGTCCTGCCCTCCTGGTCCGTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGCCAGGATGTGCAGAACAACCACTCAGGCCTTTCTGGCCCACCTGGACAGTGCATTTACCTGTGTGCTGCGGG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AGGCAGACTGCACAGCTGTCCTAGGGTAACTCACTCTGCAGCCCTTGAACATGGCACTGCCCTCCTCTGGCACT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CATGCTGGGCCTGTGCCCACTGCTGCCTCTCCATCCCTCTCTCATTGGCCTATACATCTCTTAGGACCTTTGTA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ATGGTGTCCATGCACCTTTAGAGGACTTCAGAGGCCCTGCCAAGTCTAGCATGTTCCTGTCTCCAACACCGCCT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CCTGCACATGCAGAGCAGACAGAAATACCCCACACATTCCCCAGCCTCTCTGCCCAGTATGCTCATCCACAGGG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TTTTCTCACTGCTATGAACCAGCCCCACAGCCCCAGGCCCCTGTCACCTGGCTATGCCCACTCATCCCACCCGT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CTCGTGCTGTTGCTTCCCGTAGATGGCGAGCACCTTGCAGGCAGCCTTCTGATCAGTACTGCTCTCCTAGGGCC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TGGCACACTGCAGCTGCCCTGTAAATGTTCAGCTCAGCGATTGCCAAATACCAGTTAGGGAAGAACACTGGCAT 2294
Query 1 -------------------------------------------------------------------------A 1
|
Sbjct 2295 CTTTTTCTATTCATTCCCCCTTCAACATATTTTTTGTAGTTTTTTATATAAATGACTTTTTTTTTTTTTTGAGA 2368
Query 2 TGGAGTCTCATTC-TGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGA 74
||||||.|||..| |||.||||||.||||||||.|.||||.|.|||||||||||.||||||||||||||| |.|
Sbjct 2369 TGGAGTTTCACCCTTGTTGCCCAGGCTGGAGTGCAATGGCGTAATCTCGGCTCAGTGCAACCTCTGCCTC-CCA 2441
Query 75 GG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAAT 147
|| |.||||||||||||||||||.||||||..||||||||||||||||||||..|.|.||||||||.||||||
Sbjct 2442 GGTTGAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGCACCACCATGCCTGGCTAA- 2514
Query 148 TTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-- 219
|||||||||||||||||||||||||||||.|||||||||.|||||||.|||||.||||||||.||||.|
Sbjct 2515 ---TTTTGTATTTTTAGTAGAGATGGGGTTTCTCCATGTTGGTCAGGCTGCTCTCGGACTCCTGATCTCAGGTG 2585
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2586 ACCTGCCCACCTCGGCCTCCCGAAGTGCTGGGATTACAAGGGTGAGCCACCATGCCCGGCCATAAATGATTTTA 2659
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2660 TTCATTTTTATGTTTTCTTTTGGGCGGCGGGATGGAGTCTCTGTCACCCAGGCTGGCGTGCAATGGCACGATCT 2733
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2734 TGGCTCACTGCAAGCTTCCCCTTCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACA 2807
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2808 GGCACGTGTGACCATGCCGGGCTAATTTTTTATATTTTTAGTAGAGAGAGGTTTCACCGTGTTAGCCAGGATGG 2881
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2882 TCTCGATGATCTGACCTCGTGATCTGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCCTGAGCCACCGC 2955
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2956 GTCCGGCCTCCATAAATGACTTTTAAAGGGGTTGTATGTTTAGTGTGAACAAAGACAGTACAAAGCATATAAAA 3029
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3030 TACAAGGTGAAAGCCCCCCCCCCGCCACATTAGCTGCGCCCCTGAAGTGTCTCCAGCAGAAGAGATGGATGAAT 3103
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3104 GGAAGGACACACAGATGGACAGAGAGCAGGAAAGACTGTTAGCTCTGCTAACAGTCAGGACTATTCCTTCTGGA 3177
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3178 CTCTGTGCCTTTGCCTGCACAGCTAGTGTTGATGGCTTGTTTGTTGTTTTCACCAGAGTGAGCTCCTTCTGGAC 3251
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3252 ATACTGCCTGGCAGCCTGCCTTCCTAGGGAGCTGGCGCCAAGGCCTCTCCCTGATGGCACACAAGGAGCCTCCT 3325
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3326 TCCTGTAGCAGCGCCCAGTTTTCATGTGGATGGATTGTAGTTCATTTGACCCTCCCCATCCGCGGGCCATCCGG 3399
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3400 CTTGTGTCCAGCTTTTAGCTCTTGCCAATGGTGCTGCAGTGGCCATTCTTGTAGTTATAGCTTTGCGTACTCAG 3473
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3474 GAAGGCCCTTCTCCCGACTGCGGCCCCCAGCCTGGTCCACTAAATGCAGCCTGTGGTCGGGCAGACAGCATTGG 3547
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3548 GGTCCATTAGGAAGACCAGGTTTGCTGGGCATAAGCTTCACAGGACGGGAGAACCTGCCCATGGTGGACTGTCG 3621
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3622 TTCTCCACAGCTCCCTTCCCTTGCCCCTTCGGGCCTCCAGGATATGTTTGCGGGGGTGGGTGTGGTGTCCAGCT 3695
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3696 GTTACCAGCTTCTGAGCTAGAGCTGTACTGCCTCACGTACACCCCCACCTCTGTAAATGGTCCTTGATTAAATC 3769
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3770 GTCCTCATATTACCTCCTGCAATGTGCCAGCTGATTCCCACACACCCTGACTGACATAGTTGTGGCCTCTCGAA 3843
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3844 CTTTGATATTTGGCCTGGGAGGACAGAAGAGTAAGGTCGCCACGGAAACGCAAGGGGCTCAGTTGTCCCCCCAC 3917
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3918 CCCAAGTTGATGCAGCATCTTCTCGGTCAGAATTGCTTCAGGGTGGTTTGCGCACCCTCACTTTGATGATTTAA 3991
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3992 TGAAGACATTTCCTTCTTTCCCAGCATCGGGCAGTAAGTTTCCTGGGCAGAGGCACTTTCTGTTGGTCTGGTCT 4065
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4066 TGTGGGCCCAGGCAAGCAGCCCCCTGCAGCCAAGGTGCGGCAATGACCACAGTGACCGCGTCCAAGTGCTGCCG 4139
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4140 AAACGCCTTTTTCCTCTTCCCTGTTTCCCTGGACCCTTTCCTGCTCTCTGTCCATCTGTGTGTCCTTCCGTTCA 4213
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4214 CCTGTCTCTTCTGCTGGAGACACGTACCTGAAGCAGGTCCTCTCCTGTCACTTCCTGGCTCCCCAGGGCTAGGT 4287
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4288 CCCAGGGTGCTCTCGCTCTGGCTTTCGAGGCTCCTCACCACCCAGCCCACCCCACCCCCACAGGCCCCTGTGCT 4361
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4362 CCAGTTTCATCCCTGGTCACAATGCAGTCTGCAGATGCCAGACCCCTCTTCTGTGCCCAACGGCTGGGACACCC 4435
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4436 CTACTCCCAGAGAGGCCTCTGTGGACACCCCCACAGCTCTCGCAGCACTTGATACCTTGAGTGTGATTGGTCAC 4509
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4510 ATCTGGGCTTTCTCCCCCACCCATCTGTGGAACCCCAAGAGCCAGGACAGTGACCTCATCACCTCTACTGTCTC 4583
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4584 CCCTAGCACCTCTGGGAGGAAGGGCCCACAGTAGGTGCTCAATAGATGTGTAAAGAAGGCAGGGAAGCAAGAAG 4657
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4658 GTTGCTCAAACAAGACCATGTTCCCAGCAGACAGATTGCACTCTGACCCAGATGCCACCACACGAAACTTACAC 4731
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4732 CTGCCTGGGGAACAATCCTGTGCTTGGCTCTCCTTGGTGGCCAGGGACAGTTGTGCCTCATCCCTCACTTGCAA 4805
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4806 ACCCCAGTCCTGTCTGACCCAGAGACCCTCACAGGGCATCAGCCAGTGAAGGCGGTTTGGGGCTGGAGGATATG 4879
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4880 TTCTGATCTTGGGAAGAGCTTGGTAGGAGCCAGCCACAGAAAGTTTCAGGGCAGAACTGAACAGGTCTCGGGAA 4953
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4954 GGACACTTCATGCCAGCTAGAGAGGCTCTGGGCACAGGAAAGAATTGGACTTCGGGCAGAAAAATGTTTGTGCT 5027
Query 220 ----------------------------------------------------------- 219
Sbjct 5028 ATTTAGTACTATGTAACAAATCACTCCAAAACTTCATTGCTTAAAGCAACAAGCATGTA 5086
