Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- XR_001755583.1
- Aligned Length:
- 2436
- Identities:
- 187
- Gaps:
- 2222
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTGGTCCCGGCCAGAGCCGTCCCCGTCCCGCGCCGCCGCTCAAGCTCAGAGAAGGGGCGTGGGGCCACCCCGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCGGCGCAGCCTTTTCCCTACGCGTTGGAGCCCTGGGCTCTGCTCGGCTCCGCTAGTGGTGCCGGATCCAGGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GACAGCGCGACAGACACCATTGCCACGTGGGTGCAGCCTCAGGACGTCCTGAAAGCCGGAGAGAATCAGGTCAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACGAACGTGGCCGGTCTGTTGTTAAGCTTCTGCCAAGAGCCAGGCCCGGGGCAGGGGGAGCCCTTCAGAACTGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAATTGTCCCTACCCACGGGAAGCTTAGAGGATGGAGGGCAATGCGGGGCACAGGTCATTGGCCTGACCTCCAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGGGAGTTCCAGGAGTTGTTTCTGGAAGAGGCGACGGGGAGGCCCCAGGAAATGGCTTGCAGGCCGGTACCATG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGCAATGCAAATGGACCAAGATGGGGGCAGCGCACGAGTCAACCATAACCATGGCAAGCCCGCCCATGTGGCCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAGAATCTGGGTGAGGAGAACGGGGGCGATGGAAAGGACTGCCCTCCAGCACCCAGGTCAGGAGTCTGCACTTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATCTTGTGCAAGGAAGGAGGTGGCCATTGAGAGAACTGACCCAGTGTGGAGGACCAAGCGAGGAAACCCCAGAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCAGAGACCAATTCGACAAAAGGGGTGCTGAGGCTACACACCCAGGCAGTGTCACATGGAAGTGGGGGACAAAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGGAATGAACATTTGGAGTTGGGAGCCCCAAAACCTGGAGAATGACTGGATTCCAGGTTAGGGAAGTGAAGGGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGAAGATCTCAGAGGGTTCTTACTCATGTGGCCTGCCTTGGATGTCACTAACCAGCAGGGAAGACACAGAAACA 888
Query 1 -------------------------------------ATGGAGTCTCATTC-TGTCGCCCAGACTGGAGTGAAG 36
|||||||.|||||| ||||||||||.||||||||.|.
Sbjct 889 TCGAGCATGTGGTTAGTTTTTTGTTTGTTTGTTTGAGATGGAGTTTCATTCTTGTCGCCCAGGCTGGAGTGCAA 962
Query 37 TGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAG 110
|||||.||.|||.|||||||||||||||.|||||..|.|.|||.|.||||||||||||||.||||||..|||||
Sbjct 963 TGGCAAGACCTCAGCTCACTGCAACCTCCGCCTCCTGGGTTCAGGTGATTCTCCTGCCTCAGCCTCCCAAGTAG 1036
Query 111 CTGGGATTACAG--GCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACC 182
|||||||||||| ||.|| |.||||..|||.||||| ||||||||.||||||||||||..||||||||||
Sbjct 1037 CTGGGATTACAGATGCCCA--CCACCAAACCCAGCTAA---TTTTTGTAATTTTAGTAGAGACAGGGTTTCACC 1105
Query 183 ATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------------------------------------- 219
||||||||||||||||||||.||||||||||||||.|
Sbjct 1106 ATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCACCCGCCTCAGCCTCCCAAAATGCTGGGAGT 1179
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1180 ATAGGTGTGAGCCACTGTGCCTGGCCGAGATGTGGTTATTGACATCTCAGTGGGATTGTGACATAGCAGGGCTG 1253
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1254 AACAGAGATCCGGGTACTCTCTGTATCCTGGGGTGAGACTGTCATCTAGGGCAGGGGTCTCTGGCCTCTTTGAG 1327
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1328 AATCTGGTGCATGGGACAGACCCTCTAGTCTGGAGAAGCACACACAATGTCACATGTGTGACACGTGACATGCA 1401
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1402 ACATCATTCTCAAACAATAGCCTGCTTTGGAAGGCCCCCCTGACACCCCTACTGCCCTTGGCACCCCACGGACC 1475
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1476 CCCAGTGAAGAGCCTCTAACCAGGAGAGAGCAAGGGGAGAAGAAACACCAACTGGGAGAGAAAATGGACAAGAG 1549
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1550 CCATCCTCATGGGGGATGTGAATGGGCAAAAGCCGAGGTCCAGAGGCTGAAGACACAGAGATGCATCTGTGGGG 1623
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1624 GGTCTGGTGAGTGCCCAGGAAATAATGGATTTTTGAAGCTTTCGTCAGTGGTTCCGGCTTGCCAGTGAACACAC 1697
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1698 AGAATTTACAATTTTCATTTGGTTATTGCTAATTTGAACATGGCAGAGACAGTTTGAATATGCCATTACAGTGT 1771
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1772 GAAAGAACAGTGGCCCCACATTTCAAGCAGAACTAGTGACAACCAAGTGGTGCTTAATTGTAAGAGGAACTGTC 1845
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1846 TTGGGCTTTGCGTTACTGGAGGGTTCCTGGCATTTTATAGACCTAATTTGTATACAGATGGAATCCTATGTTAA 1919
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1920 ATGCAAGCGTGGTACTCGCTACTAAGAAATCCCATGTAAATAGGGCCTTCTTGGTAAAGTTTATCATCGTTCAC 1993
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1994 CTTTTGTATTCTCAGACCCAAAGCACTGCATTCATTCACTCAATTTTCCTTGCACCTCTTTGTCTAGAGACTAA 2067
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2068 GATGATTTATTTCTTATTTAACACTATGAAAAACTAATTTATGGTTAGGGTGGATTACCTCTCACATCTCAAAT 2141
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2142 GGGGAAGGTGGCCAGGCACGGTGGCTCACACTTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGCAGATCACC 2215
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2216 AGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACAGGGCGAAACCCCATCTCTACTAAAAATACAAAATTAGCTG 2289
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2290 GACATGGCAGTGCACACCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGAAGAATCACTTGAACCCAGGAGGC 2363
Query 220 -------------------------------------------------------------------- 219
Sbjct 2364 AGAGGTTGCAGTGAGCTAAGATCATGCCATTGTACTCCAGCCTGGGCAACAAGAGTGAAACTCCATCT 2431
