Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- XR_001756633.2
- Aligned Length:
- 2836
- Identities:
- 187
- Gaps:
- 2626
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTAAAAATAATAAATGAATAAAATAAATATATAAATAAAAATTTGACCGACAGCTTAGTAAGGATTATATAGTT 74
Query 1 ------------------------------------------------ATGGAGTCTCATTCTGTCGCCCAGAC 26
||.||||||.|.|||||.||||||||
Sbjct 75 ATGTCTGCTACTGTTTAAAAAGGCTTTTCTTTTTTTTTTTTCTTTGACATAGAGTCTTACTCTGTTGCCCAGAC 148
Query 27 TGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCC 100
|.|||||.|||||||.|||||.||||||||||||||||..||||..|.|.||||||.||||||.||||||.|||
Sbjct 149 TAGAGTGCAGTGGCACGATCTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCAATTCTCATGCCTCAGCC 222
Query 101 TCCGGAGTAGCTGGGATTACAG------GCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGA 168
|||..||||||||||||||||| || ||| ||..||| |||||||||||| |||||||||||||
Sbjct 223 TCCCAAGTAGCTGGGATTACAGATGTGTGC-CAC-CACACAT----GGCTAATTTTTT---TATTTTTAGTAGA 287
Query 169 GATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG----------------------- 219
|||||||||||||||||||||||||||||||||||||||||||..||||||
Sbjct 288 GATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGGGCTCAAGTGATCTGACTGCCTCAGCCTCCC 361
Query 220 -------------------------------------------------------------------------- 219
Sbjct 362 AAAGTGGTGCTATTACAGGTGTGAGCCACCTCGCCTGACCTAAAAACACTTTTCAGCTCCAATTTTAAACTTAA 435
Query 220 -------------------------------------------------------------------------- 219
Sbjct 436 AATTTTTCTTATTTTAAAAACAACATATGCATGTATTATCAAATACAGGAAAATATGAAGAGACAGAAGTACTT 509
Query 220 -------------------------------------------------------------------------- 219
Sbjct 510 ACTGATCATAATCCTACCACCAGAGACATCACTATGAATATGTTTGTACATTTTTTTCCTGTGCATTCTAAAAC 583
Query 220 -------------------------------------------------------------------------- 219
Sbjct 584 ATAGTTAAGATTATGCTAAATATACAGTTCTCATGCTCTTTTATGTCAGAAGTGTTTTCCCATGACATTTTAAA 657
Query 220 -------------------------------------------------------------------------- 219
Sbjct 658 CCCCATAGACATAATTTTCTAATGGCTACATACTATTCTATCTAACCATTTCCAGAGGTTGGATATTTATCCAG 731
Query 220 -------------------------------------------------------------------------- 219
Sbjct 732 CTTCTGAGACTTCCTGTTATAAACAACACTTTGATGAACATCTTGGTACATAAATCTTTTGCATGTGACTACTT 805
Query 220 -------------------------------------------------------------------------- 219
Sbjct 806 CCTTAGGACAGATTCCTAGAAGTGAAATTCTGGGTCAAAGAGTAGTAATATTTTAAAGGCTGTTTATGCATACT 879
Query 220 -------------------------------------------------------------------------- 219
Sbjct 880 GACAAGCTGCTTCCTGGCAATTTGTCCAAACTTTTACTCTGACTAGCATTGTATGGGAGCTTCCCTGAGTGAAT 953
Query 220 -------------------------------------------------------------------------- 219
Sbjct 954 GCTGCCTTTGAAGTGGGGTCAGAGACTGAGGACCAAGGGGCACAGAGAAAGAAGAGTGTGGTCCTCGATGGGAG 1027
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1028 GACCCATCACAAACCGTCTTGCACAGTGTAAACCCAGGAGAGGGGCTGAAGAAACCACTGCAGCCCGGGGCCGC 1101
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1102 CCATTCTACCTGGCCCATGGTAGGCACTCAAGAAATGGTTTGCTACGTGAATAAACAAATCCACAAACATATAT 1175
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1176 TTCTGAATTCCTATCATGCGTCAAACACAAGAGATAGGGAGAGAGGAGGAAAAGAAAAGCAAGGGATCATGGGA 1249
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1250 TAAAAGGGGACAGTGGCAGTGGGGTGGACAGAAGTCAGAACTAAATTTACCTCATGCTTTAATTCGGCGAGTTT 1323
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1324 TCTTAGAATAGTCTGACCATTGCTTACGTTGAGGGTCTATAGTCCTCCCTTCCCCACAAGACAAAGTCCAACCT 1397
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1398 AATTCAGCACCAAGATCCAAGCAGCTCGGAAGATACAGGAGGGAAAAATCTGGTGTAGATTAAGTGCCACCCCC 1471
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1472 CAGCAATGGCCAGGACACAGCAGCAATGTTACCTAAGAAAGCAACTGCGCCTCTTGCTGATCAGCTAGACATGA 1545
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1546 GGGCAGTGTCCTACCTCAGCGGTTTGCAGCGGACATGCTGTCAGGCCATTGGGATAGTTCCCATAAGCCACTCC 1619
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1620 TGGTTGTCACCACTATTCCAAGTGGGCAGGAGCAGCCTTATTGACTGAGATGGGCGGCTATGGACACACATGGG 1693
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1694 TGTACGCATGTGATGGAAATGGGGGCTTGGGGCCCTGAGGGTCCACAGGGGCTGCGTGGTCAGGGAGGGTGGGC 1767
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1768 ATGGCATCACAGGCACCCCAGGGGAGAAGCTGGCTTTCTTCCCATACTTTTGGCACTGTTTTCTGTTTTGTTTG 1841
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1842 CCTTCAAAGAGCAAGTGATGGCTGGACAGCAAAGAGGAGTGGAGGCCGGGAGAATGGGCAGCTAGCCCAGCGCT 1915
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1916 CTCCAATATCTGGGAGTCGACCGCACTCCTGCACTCCCTGTCATCCCTGCTAATGGTGAGGAACTGAGCAAAAG 1989
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1990 AGCCTCCAGAGTGACAGATGAGGAAACTCAGGCATGGAGAGGTTGAGCGACTTGCCCAAATTCATGCAGTTAGG 2063
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2064 ACCTGGCAGAGCTGCGCTTTGAACCCAGGCTGCCTGGCTCTAGAGTGTGTGCACGAAACTTCACTGCCATATGA 2137
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2138 ACAAAACTGCAGGACATATGTTCTCAAAGCAAATAAGCCTCCCAGAGAGGCTTTTCCTGATGGCTTCAAGGACC 2211
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2212 TGCCCTAGCCTGGTCTGACTTCCCAGAGGGGATCCAGTCCCAACATTGGCCCTATCTTTAGACCACATTTCCAT 2285
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2286 CCCATTCTCAGTGAAAACCCTGAGTCATGACAGAAGACAACCAATGCTGGAGAGAGGAGGTTTCAGGTAATGCC 2359
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2360 TGTTTTAGGCATCCTCTCCTTTAAGAAAAATTTTTATATCAAGGCACCTCAACATAATAATACCTTTATTGCAT 2433
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2434 ATAGGTAGAATATAAAACTGACTTGTAAGACCACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 2507
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2508 TGTGTGTGTGTGTGTTCTCTAGCTAGCCTGCAGGGACGGGACTCAGTTCCTCAGCAGCCCAGTGCCTGGCACAA 2581
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2582 CAGGCATTGAATTAGAAGTGCCAGACATTTTCAAACTTTAAGGTATAATTTGTTTGGACACTTTGGCTGGGCAT 2655
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2656 TTTGATAAAACATCCCTAGTTAAAAGATGGCAACCAACAGGCATCAAACCAAAACCACCCTCAAAGAGCAAAAT 2729
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2730 ATAAGGCCTTTGTAACAAGAGTCACAGAGTTATGGCTGGCCGCGGTGGCTCATGCCTGTAATCCTAGCACTTCG 2803
Query 220 ------------------------ 219
Sbjct 2804 GGCCGTCTCTATTAAAAACACAAA 2827
