Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- XR_002956469.1
- Aligned Length:
- 3491
- Identities:
- 189
- Gaps:
- 3279
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAAACACGGAGCAAAAAGGCACTCGTCACGGCCCCATACGGCCCCGGGGCTAGTCGCCAGGGTCAAGGGTAGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGAGCCCAGGGTTGCCGAGGCGGAGGACTGAGGCAGGGGCAGCTGAGGTAATCAGTCCAAAAACCAGCGTGCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAGCGTTTCCCCAGGGCTCTGTCCGGACTCTGAAGCACTGCATAAAGGGGTCTGTCTGAGCCCAATTTACTTCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGTGGGGAAGGGAAAGGGAAGACACCACCGGAAGCAAGGAAGGTGCTGTGTAATCATTAAGGAGCGGAGGCTTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGAGCTGCTAAAATGCCGGATTACCTCGGTGCCGATCAGCGGAAGACCAAAGAGGATGAGAAGGACGACAAGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCATCCGAGCTCTGGATGAGGGGGATATTGCCTTGTTGAAAACTTATGGTCAGAGCACTTACTCTAGGCAGATC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAGCAAGTTGAAGATGACATTCAGCAACTTCTCAAGAAAATTAATGAGCTCACTGGTATTAAAGAATCTGACAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGGCCTGGCCCCACCAGCACTCTGGGATTTGGCTGCAGATAAGCAGACACTCCAGAGTGAACAGCCTTTACAGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTGCCAGGTGTACAAAGATAATCAATGCTGATTCGGAGGACCCAAAATACATTATCAACGTAAAGCAGTTTGCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAGTTTGTGGTGGACCTTAGTGATCAGGTGGCACCTACTGACATTGAAGAAGGGATGAGAGTGGGGTAAGATTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTATTTACAATAAATACTTTTCTTTCACTAAGGATACTGTCTCACATTCATATCCTTGGCTTTGTAGTGAATAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATGGACTGAGTTCCTTGGAATACCAAAGGATGATCTAGTAATGTACTATAGTTGAAAATTCTGTCTTCTGCATC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGCTTCCTAACTTCCCATCGGCTTCGCTGACTCCCCTACTCCCACTGTTGTTTATTATGAATGGCTTCAAATTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAGAGTTGAGGTTACCAGTCCATTTAAGGTAACATGGTATAGGTTGGGGGAGTACTTGCTTTAGGATAGTTGTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATGCTAAGTGTGTTAATGTCTATAGAATACATAACAACTCACTTAGTAAATTAAAAAAAAATCTCCCCTCCCTC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTCAAAGGTTTGATTGCTGTTGGATAGGTTGTTTGCGACATTAGACATGTAGTTTAGTATCCTCAGATTTCATG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTCTCTTTATTTCTCTTTATATAATTAGGGACTCTGTCTCTCTCTTGTTTTCTTAAAGTATGGTTTTGGGGATA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AAGGACTAAACATAAAAGCACTTTGAAAGCTTAAAGAATGTATTAATGACTATCTTTTTTACTTCCTTAGCGTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GATAGAAATAAATATCAAATTCACATTCCATTGCCTCCTAAGATTGACCCAACAGTTACCATGATGCAGGTAAG 1406
Query 1 -----------------------------------------------------ATGGAGTCTCATTC-TGTCGC 20
..|||||.|||.|| |||
Sbjct 1407 AAACTATGGGAGGGAAAAGGAAGGCTATGTCTTTTTTTTTTTTTTTTTTTGAGGCGGAGTTTCACTCTTGT--- 1477
Query 21 CCAGACTGGAGT-GAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGC 93
||||.||||||| ||| |||..||||||.||||||||||||||||||||||.||.|.||||||.||||||||||
Sbjct 1478 CCAGGCTGGAGTAGAA-TGGTGTGATCTTGGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGCAATTCTCCTGC 1550
Query 94 CTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAG 167
|||.||||||.||||||||||||||||||||||.|||.||||.||||.||||| ||||||||||||||||||
Sbjct 1551 CTCAGCCTCCCGAGTAGCTGGGATTACAGGCACCCGCCACCACGCCCAGCTAA---TTTTTGTATTTTTAGTAG 1621
Query 168 AGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG---------------------- 219
|||.||.|||||||||||||||||||.|||||.||||||||.||||||||||
Sbjct 1622 AGACGGTGTTTCACCATGTTGGCCAGACTGGTTTCGAACTCATGACCTCAAGTGTTTGGCCTGCCTCAGCCTCC 1695
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1696 CAAAGTGCTGGGATTCCAGGCGTGAGCCACTGAGCCCGGCAGTATTTTATATATATATTTTTTGAGACAGAGTC 1769
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1770 TCAGCCTGTCTTTATTTTACTAGTTTGTTTTTCATTCATTAGTGTCATAACAAGTTAATACAGCAAGTAGTTCC 1843
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1844 AGGGCACTGGGCAATGTATTCAATTTTTATTAAAATTCTCACTTGTGAGTTTTTCTTTTAAGGTATTAGGTCTA 1917
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1918 TTCTATTGAATTTGGACAGTATCCAAAAAGCCTGTGACTGTATGTTGTACATTTCTGTCCCTCTCTTAGGTGGA 1991
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1992 AGAGAAACCTGATGTCACATACAGTGATGTTGGTGGCTGTAAGGAACAGATTGAGAAACTGCGAGAAGTAGTTG 2065
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2066 AAACCCCATTACTTCATCCAGAGAGGTTTGTGAACCTTGGCATTGAGCCTCCCAAGGGCGTGCTGCTCTTTGGT 2139
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2140 CCACCCGGTACAGGCAAGACACTCTGTGCGCGGGCAGTTGCTAATCGGACTGATGCGTGCTTCATTCGAGTTAT 2213
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2214 TGGATCTGAGCTTGTACAGAAATACGTCGGTGAGGGGGCTCGAATGGTTCGTGAACTCTTTGAAATGGCCAGAA 2287
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2288 CAAAAAAAGCCTGCCTTATCTTCTTTGATGAAATTGATGCTATTGGAGGGGCTCGTTTTGATGATGGTGCTGGA 2361
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2362 GGTGACAATGAAGTGCAGAGAACAATGTTGGAACTGATCAATCAGCTTGATGGTTTTGATCCTAGAGGCAATAT 2435
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2436 TAAAGTGCTGATGGCCACTAACAGACCTGATACTTTGGATCCAGCACTGATGAGGCCAGGGAGATTGGATAGAA 2509
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2510 AAATTGAATTTAGCTTGCCCGATCTAGAGGGTCGGACCCACATATTTAAGATTCACGCTCGTTCAATGAGTGTT 2583
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2584 GAAAGAGATATCAGATTTGAACTGTTAGCACGACTGTGTCCAAATAGCACTGGTGCTGAGATTAGAAGCGTCTG 2657
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2658 CACAGAGGCTGGTATGTTTGCCATCAGAGCACGGCGAAAAATTGCTACCGAGAAGGATTTCTTGGAAGCTGTAA 2731
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2732 ATAAGGTCATTAAGTCTTATGCCAAATTCAGTGCTACTCCTCGTTACATGACATACAACTGAACCCTGAAGGCT 2805
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2806 TTCAAGTGAAAACTTTAAATTGGAATCCTAACCTTATATAGACTTGTTAATAACCAATTCATAAACAAATAAAT 2879
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2880 GGCTTCAAAATTGTATGCTTTTTTCCATATCTCTTCTTGTAATATAATAAAAGGTGATTTCTAATGTTATTAGG 2953
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2954 CAGAAAAGCTTGTTAGAATATATTTTGACTATTTTTTTGACCCACACCCGTTTAAGGATTTCACATCATACAAA 3027
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3028 GCGCTTGCTTAGATGGCTTCTATCCTAGGCATATGCTGGCCGGGTGCTCTACATATAAATTCTCATTGTATCCT 3101
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3102 CCCATCTGTCCACTGAGGAAGATTATCAAATGGATCTTCATCCAATGGATGCATAAACTTTCCTACTTACTTGT 3175
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3176 AGTGGCAAAGCTGGCTTTCAAGTACAAGTTTGTTGGCTCCATTACCTATGCTCCTATTATCCGCTTCTGTCCCG 3249
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3250 CAACAAAGTAGCTCACTTAGGCGTATGACCACATGCATTATGATAGTTTCCCACCACCATATTGAATAATAAAA 3323
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3324 GCTTTGGCCAAAGCTTTTTTAAAGTAGGAGAAACATTGGATGTATATGTTTTGCATTGCCATTTGATTTCAAAT 3397
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3398 TAATCAGGAAGAATTAGTGATTTTAATGAGCAGTAAAGTGGTGCAATAAAGCAGAAAGAAAAATGTTCAGCCAG 3471
Query 220 ------------- 219
Sbjct 3472 AAGTGAAAGACTA 3484
