Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12783
Subject:
XR_002957596.1
Aligned Length:
3486
Identities:
188
Gaps:
3272

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCTGCAGGCGCTTGTGCGGGAAGGCGTCTTCCGTGCAGATGTAGACGGCTCCTGGGAAGCAAGAGTGCCTGATG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGCCCAGGGGACTCCAGACGGGCCTGTGACTGCCACACAAATCAAGTGCAGATGTCTCCCGCCATTTCTAACTC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TCTGCCCCTCACAGGGCAGGGAGCAAGTGGCAGCATCAGGGCAACGCCTTCTGGAAATGGCCCCTGAGCCCCGA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CACATGGCCACCCTCAAGGCCCCCACTGAGCAAGCGTTTCCTCTCTTCAAAGCTCCTGCAATCTGGGCTCCATG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GTGAAATTCAAAAAGCCAGCTTGAAAAGACACGTGTTGGTGAGGATGTGTAGGAGGCAGACCCCTGACCCCTGT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GCACTGCCGCTAGGAATGTAAAATGGTGCAGCTCGGAAAACAATCGGTACTTCCTTAAAAAGTTAAACAAATCA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CATGACTCAGCAGCCCCACTCCTAGGTAGATACCCAAGAGAAAGAACGTCCACCGTAGCACGTTTCATGACAGC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CCGGGGGGAGACGGCCCAAAGGCCATCAACTGAGGAGTGGACGAATGAAGTGCGGCCCATCCTTACAGTGGGAT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GATCGAATCTTAAAAGGGAAGGCAGTTCTGACACCTGCTCCAGCACGGATGAACCTCGAAAACACAATGCCAAT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GCAGGAAGCCTGTCACGAGACCACGTGCTGTCCGGCTGCACTTGCATGGAGCTCCCAGGACAGGAAGAGTCACA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GGTAGGGAAAGGGGAGGCAGGCTGCTGGGGGTGGGGGCTGACTGCTCATGGGTAGGGTTTCCTTTTGGGGTGAG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GGAACTGTTCTGGAATTGGATAGTGGTGACGGGCACAGAACTTTGTGCTTCTATTAAAAGCCACTGAATTTATT  888

Query    1  --------------------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTC  48
                                      |  |||.||||.||||||||||||.||||||||.|||||...||||||
Sbjct  889  TATTTTATTTTAATTTTTGAGAGACAA--GAGACTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGTGCGATCTC  960

Query   49  GGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTAC-A  121
            ||||||||||||||||||||||.||.|.|||||.||||||||||||||.||||.|.|||||||||||||||| |
Sbjct  961  GGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTTCTGAGTAGCTGGGATTACAA  1034

Query  122  GGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGC  195
            |||...|||.||||.||||.|||||   |||||||||||||||||||||..|||||||||||||||||.|||||
Sbjct 1035  GGCGTGCGCTACCACGCCCAGCTAA---TTTTTGTATTTTTAGTAGAGACTGGGTTTCACCATGTTGGTCAGGC  1105

Query  196  TGGTCTCGAACTCCTGACCTCAAG--------------------------------------------------  219
            ||.|||||||||||||||.|||.|                                                  
Sbjct 1106  TGCTCTCGAACTCCTGACTTCATGATCCGCCTGCCTCAGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATG  1179

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1180  AGGTACTGCGCCTATCAGGCCGAACTGTACACTTTTAGAGGGAATTTTATGGCATGTAAATTACATCTCAATTT  1253

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1254  AAAAAACAGGAAGGCTTAGGGGGACTGATTTGAGTAATAATAAAACTCCAGTTTCCTGCAAAACAAAAACAAAA  1327

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1328  AGACAAGGCCGGCGAGCTCTCTAAGCACTGACTATGCCAGGAAGGCTGCCCAGCCAGGACCCCGTGGCCCACGG  1401

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1402  GGCGTCGTCCTGTTCCTGCAGTGGCACATGCAGTTGTGGGAGAGCCAGTGCCCCCACGCCGTGTCATGCAGCCT  1475

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1476  GTTTGTGAGTGTCCGCGTAACCTTTAATTCTGAGCTGATTTTGCTTTGACAGAATTTCAAACGTAAAGAAGAGT  1549

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1550  TGCAAAAATGGGTCAGGAACCCCCCGCCCCATTCTGTGTCAGAACTAAGCTTCTGAGAAGCATCTGGCCCGCTT  1623

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1624  GAGGCCAGGAACGTATAAATACTGCCTTGGGAGGCCACATCCCTTTTGTGGCTGGTTCCCTTCCCCACCAGTGT  1697

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1698  CCCCAGCAGTGACTGTGCCCCTAGTCAGGAGCCACAGGAAGGTCGGGGCCCTGGGCTTCCTCCGTCCTGTTGGC  1771

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1772  TGGAGAGAGGCTGGGCTGGAAGGCTCGGAAGCAGGTGGAACCGGTCAAGCAGCGTGTTTTTGTTGGGGTGACGT  1845

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1846  TATGTAGGGGCTGCACAGTCATGGGGACATCGTGAAGCTGGCAGGAGGGTGGCTGTGGACAGCCCAGCGGTGGG  1919

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1920  CGGGGCCCCAGCAGGCCTGGGAGAGCCTCACGCGGCTTAAGCACGGGAGTCGGAATCACTTCAGAGCCCGCCTG  1993

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1994  CCGCTTTCTTTTCAAAATTCGGGCCTTTAGATTGGATCCAGGAAAGGAAGTCATTTCCCCAGGAAAGCACATCT  2067

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2068  GACCCCTAACCTTGCATGTGGTCACGGTGGCCGTGGGGCCCCCTCCCTTCCCCTGGCCCGCAAGGCTGGACTGT  2141

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2142  GCTGTCATCCCGCAGCAGTCACTGGGCTGGGCACAGCTGGGGGATTCAGGGAGGGTGTCCTAAGGCTTCTGTGT  2215

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2216  CCCTGGGTATCGGGGAGTGTGGGCTTCACTGAAAAGGCCAACGGGGTGGAAGCTGAGGGGGAGTCATTGCACAA  2289

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2290  ATCAGATTTGCACGAAGCCTGGCACGGAGGACGCTGGAGAATGAGGGCGGCTCCCGTCCCGTTCCTGAGCACGC  2363

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2364  TCGAGTCCCGCCTCCACCTCACAGCAGCTCTTCCGTGCGGTAAGCGGGAGACTCCCATTTTCAAGGCCAACTCC  2437

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2438  TGTCCTCCCGGCTTCTGGCTGTCTCCAGGCTCATCCCCAAGACCAGCCGCAGGGACTCAGGCACCTGACAAGAG  2511

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2512  GGTGCCCTCCCCTGGGCTGCAGGGACAAAAATGCCTGTGGCGTGAGCAGACCCCAGCTGGGCTCTCAGGAGACC  2585

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2586  CCTCACCCTCCACCCGACACGGAGGCTCAGGAGACCCCTCACCCTCCACCCAGCACTGAAGCTCAGGCAGGCAC  2659

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2660  AGCACACCCTGGGTCCTGGGGATGACGCTGACCTGAGGGTGGCAGAGGTGAGGTTCCCAGCCACACCGCTGCTG  2733

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2734  GCAGGTCAGGCCCGTGAGGAGGTGGCTGGCTGGGCCTGTGGGTCCAGGGCCTGGGGTCCGGCCCTGTGTGGGAA  2807

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2808  GTGAGCCTAGCAGATGTGCTCGGAGGTGCCACCGATGAAAAAATACTGCCACTCTGTTCACGTGGAGTTTAAGA  2881

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2882  CAACGTGGGAATCGCATGTTGACACCAGGGAATTAGTTTAAAAGTTAAGGAGCTACTGAGAAACATCTCTCCTC  2955

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2956  CTCACAGCTCACAGTTTAAAACTACGTGAACTTTTAACACCTGAGAGACCCAGGCAGGCATGCTCTGAACGCTT  3029

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3030  TAGTCCAATGCAGGGAACCCTCGTTTCACAGACAGAGCGTACAGGCTCACGGGGCCGCGCCAGGAGCATACCTG  3103

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3104  GCCTGGCGGCGGGGCACCCGGGGAAAGGCTGTGCTGCCCTCCCTGCGTTGCTGGCTCTGTGGACTCTGGGCTTG  3177

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3178  GCAGCTGTGCGGAACGTGGGCCGGCATCGCTGTGCTCAGCCAGCGACCCCTGGGGGCCTAGCTCTGCTGAGGGC  3251

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3252  CGGCTGCCTGGTGGTGGGGTTCGTACCCTCCCACCCCTCCTGCTGTCAGCTGAGCCCAGCCTCACTTCCCCCTC  3325

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3326  CCTGTTCTGGAAGGAGCGAGGGCAATCAGGGTGAGAAGGAGGGAGACGCAATGGTAGGAACAGCGCAAGAGGCG  3399

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3400  GCCACTGCCCCACCTCAACGGAAAGCTGTCCCACACAAAGCAGGGGCCGCCCACCTGCCCAGACCCCACGGAAG  3473

Query  220  --------  219
                    
Sbjct 3474  GGGTGGCC  3481

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