Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- XR_002957597.1
- Aligned Length:
- 3555
- Identities:
- 188
- Gaps:
- 3341
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCTGCAGGCGCTTGTGCGGGAAGGCGTCTTCCGTGCAGATGTAGACGGCTCCTGGGAAGCAAGAGTGCCTGATG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCCCAGGGGACTCCAGACGGGCCTGTGACTGCCACACAAATCAAGTGCAGATGTCTCCCGCCATTTCTAACTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCTGCCCCTCACAGGTTCTTTGCCCCTCGCCTGGGGAGGGAGGAGGCTGGTGCTTTTTCTCACCCTCCCACTGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAGCCACCTCCGGGGCCAGGTGACCCCTCAGGAGGAATATGGGCTGGGTCTCCACTTCTGACACCCAGGCAAGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACTTCCCCTGTCCTGGGCCCTGGGCTGGAATGGCCACAGATGGGAGGCCTCTCCTGCTCCACCCTGCCCCTCCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCCCCCTGTGAACCTCCGTTCCCCACTGCAGGGCAGGGAGCAAGTGGCAGCATCAGGGCAACGCCTTCTGGAAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGGCCCCTGAGCCCCGACACATGGCCACCCTCAAGGCCCCCACTGAGCAAGCGTTTCCTCTCTTCAAAGCTCCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCAATCTGGGCTCCATGGTGAAATTCAAAAAGCCAGCTTGAAAAGACACGTGTTGGTGAGGATGTGTAGGAGGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGACCCCTGACCCCTGTGCACTGCCGCTAGGAATGTAAAATGGTGCAGCTCGGAAAACAATCGTGGGATGATCG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AATCTTAAAAGGGAAGGCAGTTCTGACACCTGCTCCAGCACGGATGAACCTCGAAAACACAATGCCAATGCAGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAGCCTGTCACGAGACCACGTGCTGTCCGGCTGCACTTGCATGGAGCTCCCAGGACAGGAAGAGTCACAGGTAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGAAAGGGGAGGCAGGCTGCTGGGGGTGGGGGCTGACTGCTCATGGGTAGGGTTTCCTTTTGGGGTGAGGGAAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGTTCTGGAATTGGATAGTGGTGACGGGCACAGAACTTTGTGCTTCTATTAAAAGCCACTGAATTTATTTATTT 962
Query 1 ---------------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTC 53
| |||.||||.||||||||||||.||||||||.|||||...|||||||||||
Sbjct 963 TATTTTAATTTTTGAGAGACAA--GAGACTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGTGCGATCTCGGCTC 1034
Query 54 ACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTAC-AGGCAC 126
|||||||||||||||||.||.|.|||||.||||||||||||||.||||.|.|||||||||||||||| ||||..
Sbjct 1035 ACTGCAACCTCTGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTTCTGAGTAGCTGGGATTACAAGGCGT 1108
Query 127 ACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTC 200
.|||.||||.||||.||||| |||||||||||||||||||||..|||||||||||||||||.|||||||.||
Sbjct 1109 GCGCTACCACGCCCAGCTAA---TTTTTGTATTTTTAGTAGAGACTGGGTTTCACCATGTTGGTCAGGCTGCTC 1179
Query 201 TCGAACTCCTGACCTCAAG------------------------------------------------------- 219
|||||||||||||.|||.|
Sbjct 1180 TCGAACTCCTGACTTCATGATCCGCCTGCCTCAGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGGTA 1253
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1254 CTGCGCCTATCAGGCCGAACTGTACACTTTTAGAGGGAATTTTATGGCATGTAAATTACATCTCAATTTAAAAA 1327
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1328 ACAGGAAGGCTTAGGGGGACTGATTTGAGTAATAATAAAACTCCAGTTTCCTGCAAAACAAAAACAAAAAGACA 1401
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1402 AGGCCGGCGAGCTCTCTAAGCACTGACTATGCCAGGAAGGCTGCCCAGCCAGGACCCCGTGGCCCACGGGGCGT 1475
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1476 CGTCCTGTTCCTGCAGTGGCACATGCAGTTGTGGGAGAGCCAGTGCCCCCACGCCGTGTCATGCAGCCTGTTTG 1549
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1550 TGAGTGTCCGCGTAACCTTTAATTCTGAGCTGATTTTGCTTTGACAGAATTTCAAACGTAAAGAAGAGTTGCAA 1623
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1624 AAATGGGTCAGGAACCCCCCGCCCCATTCTGTGTCAGAACTAAGCTTCTGAGAAGCATCTGGCCCGCTTGAGGC 1697
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1698 CAGGAACGTATAAATACTGCCTTGGGAGGCCACATCCCTTTTGTGGCTGGTTCCCTTCCCCACCAGTGTCCCCA 1771
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1772 GCAGTGACTGTGCCCCTAGTCAGGAGCCACAGGAAGGTCGGGGCCCTGGGCTTCCTCCGTCCTGTTGGCTGGAG 1845
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1846 AGAGGCTGGGCTGGAAGGCTCGGAAGCAGGTGGAACCGGTCAAGCAGCGTGTTTTTGTTGGGGTGACGTTATGT 1919
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1920 AGGGGCTGCACAGTCATGGGGACATCGTGAAGCTGGCAGGAGGGTGGCTGTGGACAGCCCAGCGGTGGGCGGGG 1993
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1994 CCCCAGCAGGCCTGGGAGAGCCTCACGCGGCTTAAGCACGGGAGTCGGAATCACTTCAGAGCCCGCCTGCCGCT 2067
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2068 TTCTTTTCAAAATTCGGGCCTTTAGATTGGATCCAGGAAAGGAAGTCATTTCCCCAGGAAAGCACATCTGACCC 2141
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2142 CTAACCTTGCATGTGGTCACGGTGGCCGTGGGGCCCCCTCCCTTCCCCTGGCCCGCAAGGCTGGACTGTGCTGT 2215
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2216 CATCCCGCAGCAGTCACTGGGCTGGGCACAGCTGGGGGATTCAGGGAGGGTGTCCTAAGGCTTCTGTGTCCCTG 2289
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2290 GGTATCGGGGAGTGTGGGCTTCACTGAAAAGGCCAACGGGGTGGAAGCTGAGGGGGAGTCATTGCACAAATCAG 2363
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2364 ATTTGCACGAAGCCTGGCACGGAGGACGCTGGAGAATGAGGGCGGCTCCCGTCCCGTTCCTGAGCACGCTCGAG 2437
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2438 TCCCGCCTCCACCTCACAGCAGCTCTTCCGTGCGGTAAGCGGGAGACTCCCATTTTCAAGGCCAACTCCTGTCC 2511
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2512 TCCCGGCTTCTGGCTGTCTCCAGGCTCATCCCCAAGACCAGCCGCAGGGACTCAGGCACCTGACAAGAGGGTGC 2585
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2586 CCTCCCCTGGGCTGCAGGGACAAAAATGCCTGTGGCGTGAGCAGACCCCAGCTGGGCTCTCAGGAGACCCCTCA 2659
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2660 CCCTCCACCCGACACGGAGGCTCAGGAGACCCCTCACCCTCCACCCAGCACTGAAGCTCAGGCAGGCACAGCAC 2733
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2734 ACCCTGGGTCCTGGGGATGACGCTGACCTGAGGGTGGCAGAGGTGAGGTTCCCAGCCACACCGCTGCTGGCAGG 2807
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2808 TCAGGCCCGTGAGGAGGTGGCTGGCTGGGCCTGTGGGTCCAGGGCCTGGGGTCCGGCCCTGTGTGGGAAGTGAG 2881
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2882 CCTAGCAGATGTGCTCGGAGGTGCCACCGATGAAAAAATACTGCCACTCTGTTCACGTGGAGTTTAAGACAACG 2955
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2956 TGGGAATCGCATGTTGACACCAGGGAATTAGTTTAAAAGTTAAGGAGCTACTGAGAAACATCTCTCCTCCTCAC 3029
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3030 AGCTCACAGTTTAAAACTACGTGAACTTTTAACACCTGAGAGACCCAGGCAGGCATGCTCTGAACGCTTTAGTC 3103
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3104 CAATGCAGGGAACCCTCGTTTCACAGACAGAGCGTACAGGCTCACGGGGCCGCGCCAGGAGCATACCTGGCCTG 3177
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3178 GCGGCGGGGCACCCGGGGAAAGGCTGTGCTGCCCTCCCTGCGTTGCTGGCTCTGTGGACTCTGGGCTTGGCAGC 3251
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3252 TGTGCGGAACGTGGGCCGGCATCGCTGTGCTCAGCCAGCGACCCCTGGGGGCCTAGCTCTGCTGAGGGCCGGCT 3325
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3326 GCCTGGTGGTGGGGTTCGTACCCTCCCACCCCTCCTGCTGTCAGCTGAGCCCAGCCTCACTTCCCCCTCCCTGT 3399
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3400 TCTGGAAGGAGCGAGGGCAATCAGGGTGAGAAGGAGGGAGACGCAATGGTAGGAACAGCGCAAGAGGCGGCCAC 3473
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3474 TGCCCCACCTCAACGGAAAGCTGTCCCACACAAAGCAGGGGCCGCCCACCTGCCCAGACCCCACGGAAGGGGTG 3547
Query 220 --- 219
Sbjct 3548 GCC 3550
