Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12783
Subject:
XR_002957599.1
Aligned Length:
3122
Identities:
188
Gaps:
2908

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCTGCAGGCGCTTGTGCGGGAAGGCGTCTTCCGTGCAGATGTAGACGGCTCCTGGGAAGCAAGAGTGCCTGATG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGCCCAGGGGACTCCAGACGGGCCTGTGACTGCCACACAAATCAAGTGCAGATGTCTCCCGCCATTTCTAACTC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TCTGCCCCTCACAGCTCCTGCAATCTGGGCTCCATGGTGAAATTCAAAAAGCCAGCTTGAAAAGACACGTGTTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TGGGATGATCGAATCTTAAAAGGGAAGGCAGTTCTGACACCTGCTCCAGCACGGATGAACCTCGAAAACACAAT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GCCAATGCAGGAAGCCTGTCACGAGACCACGTGCTGTCCGGCTGCACTTGCATGGAGCTCCCAGGACAGGAAGA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GTCACAGGTAGGGAAAGGGGAGGCAGGCTGCTGGGGGTGGGGGCTGACTGCTCATGGGTAGGGTTTCCTTTTGG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GGTGAGGGAACTGTTCTGGAATTGGATAGTGGTGACGGGCACAGAACTTTGTGCTTCTATTAAAAGCCACTGAA  518

Query    1  --------------------------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCAT  42
                                            |  |||.||||.||||||||||||.||||||||.|||||...
Sbjct  519  TTTATTTATTTTATTTTAATTTTTGAGAGACAA--GAGACTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGTGC  590

Query   43  GATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGA  116
            ||||||||||||||||||||||||||||.||.|.|||||.||||||||||||||.||||.|.||||||||||||
Sbjct  591  GATCTCGGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTTCTGAGTAGCTGGGA  664

Query  117  TTAC-AGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGG  189
            |||| ||||...|||.||||.||||.|||||   |||||||||||||||||||||..|||||||||||||||||
Sbjct  665  TTACAAGGCGTGCGCTACCACGCCCAGCTAA---TTTTTGTATTTTTAGTAGAGACTGGGTTTCACCATGTTGG  735

Query  190  CCAGGCTGGTCTCGAACTCCTGACCTCAAG--------------------------------------------  219
            .|||||||.|||||||||||||||.|||.|                                            
Sbjct  736  TCAGGCTGCTCTCGAACTCCTGACTTCATGATCCGCCTGCCTCAGCCTCGGCCTCCCAAAGTGCTGGGATTACA  809

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  810  GGCATGAGGTACTGCGCCTATCAGGCCGAACTGTACACTTTTAGAGGGAATTTTATGGCATGTAAATTACATCT  883

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  884  CAATTTAAAAAACAGGAAGGCTTAGGGGGACTGATTTGAGTAATAATAAAACTCCAGTTTCCTGCAAAACAAAA  957

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  958  ACAAAAAGACAAGGCCGGCGAGCTCTCTAAGCACTGACTATGCCAGGAAGGCTGCCCAGCCAGGACCCCGTGGC  1031

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1032  CCACGGGGCGTCGTCCTGTTCCTGCAGTGGCACATGCAGTTGTGGGAGAGCCAGTGCCCCCACGCCGTGTCATG  1105

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1106  CAGCCTGTTTGTGAGTGTCCGCGTAACCTTTAATTCTGAGCTGATTTTGCTTTGACAGAATTTCAAACGTAAAG  1179

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1180  AAGAGTTGCAAAAATGGGTCAGGAACCCCCCGCCCCATTCTGTGTCAGAACTAAGCTTCTGAGAAGCATCTGGC  1253

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1254  CCGCTTGAGGCCAGGAACGTATAAATACTGCCTTGGGAGGCCACATCCCTTTTGTGGCTGGTTCCCTTCCCCAC  1327

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1328  CAGTGTCCCCAGCAGTGACTGTGCCCCTAGTCAGGAGCCACAGGAAGGTCGGGGCCCTGGGCTTCCTCCGTCCT  1401

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1402  GTTGGCTGGAGAGAGGCTGGGCTGGAAGGCTCGGAAGCAGGTGGAACCGGTCAAGCAGCGTGTTTTTGTTGGGG  1475

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1476  TGACGTTATGTAGGGGCTGCACAGTCATGGGGACATCGTGAAGCTGGCAGGAGGGTGGCTGTGGACAGCCCAGC  1549

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1550  GGTGGGCGGGGCCCCAGCAGGCCTGGGAGAGCCTCACGCGGCTTAAGCACGGGAGTCGGAATCACTTCAGAGCC  1623

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1624  CGCCTGCCGCTTTCTTTTCAAAATTCGGGCCTTTAGATTGGATCCAGGAAAGGAAGTCATTTCCCCAGGAAAGC  1697

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1698  ACATCTGACCCCTAACCTTGCATGTGGTCACGGTGGCCGTGGGGCCCCCTCCCTTCCCCTGGCCCGCAAGGCTG  1771

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1772  GACTGTGCTGTCATCCCGCAGCAGTCACTGGGCTGGGCACAGCTGGGGGATTCAGGGAGGGTGTCCTAAGGCTT  1845

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1846  CTGTGTCCCTGGGTATCGGGGAGTGTGGGCTTCACTGAAAAGGCCAACGGGGTGGAAGCTGAGGGGGAGTCATT  1919

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1920  GCACAAATCAGATTTGCACGAAGCCTGGCACGGAGGACGCTGGAGAATGAGGGCGGCTCCCGTCCCGTTCCTGA  1993

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1994  GCACGCTCGAGTCCCGCCTCCACCTCACAGCAGCTCTTCCGTGCGGTAAGCGGGAGACTCCCATTTTCAAGGCC  2067

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2068  AACTCCTGTCCTCCCGGCTTCTGGCTGTCTCCAGGCTCATCCCCAAGACCAGCCGCAGGGACTCAGGCACCTGA  2141

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2142  CAAGAGGGTGCCCTCCCCTGGGCTGCAGGGACAAAAATGCCTGTGGCGTGAGCAGACCCCAGCTGGGCTCTCAG  2215

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2216  GAGACCCCTCACCCTCCACCCGACACGGAGGCTCAGGAGACCCCTCACCCTCCACCCAGCACTGAAGCTCAGGC  2289

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2290  AGGCACAGCACACCCTGGGTCCTGGGGATGACGCTGACCTGAGGGTGGCAGAGGTGAGGTTCCCAGCCACACCG  2363

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2364  CTGCTGGCAGGTCAGGCCCGTGAGGAGGTGGCTGGCTGGGCCTGTGGGTCCAGGGCCTGGGGTCCGGCCCTGTG  2437

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2438  TGGGAAGTGAGCCTAGCAGATGTGCTCGGAGGTGCCACCGATGAAAAAATACTGCCACTCTGTTCACGTGGAGT  2511

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2512  TTAAGACAACGTGGGAATCGCATGTTGACACCAGGGAATTAGTTTAAAAGTTAAGGAGCTACTGAGAAACATCT  2585

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2586  CTCCTCCTCACAGCTCACAGTTTAAAACTACGTGAACTTTTAACACCTGAGAGACCCAGGCAGGCATGCTCTGA  2659

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2660  ACGCTTTAGTCCAATGCAGGGAACCCTCGTTTCACAGACAGAGCGTACAGGCTCACGGGGCCGCGCCAGGAGCA  2733

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2734  TACCTGGCCTGGCGGCGGGGCACCCGGGGAAAGGCTGTGCTGCCCTCCCTGCGTTGCTGGCTCTGTGGACTCTG  2807

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2808  GGCTTGGCAGCTGTGCGGAACGTGGGCCGGCATCGCTGTGCTCAGCCAGCGACCCCTGGGGGCCTAGCTCTGCT  2881

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2882  GAGGGCCGGCTGCCTGGTGGTGGGGTTCGTACCCTCCCACCCCTCCTGCTGTCAGCTGAGCCCAGCCTCACTTC  2955

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2956  CCCCTCCCTGTTCTGGAAGGAGCGAGGGCAATCAGGGTGAGAAGGAGGGAGACGCAATGGTAGGAACAGCGCAA  3029

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3030  GAGGCGGCCACTGCCCCACCTCAACGGAAAGCTGTCCCACACAAAGCAGGGGCCGCCCACCTGCCCAGACCCCA  3103

Query  220  --------------  219
                          
Sbjct 3104  CGGAAGGGGTGGCC  3117

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