Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- XR_002958010.1
- Aligned Length:
- 4195
- Identities:
- 188
- Gaps:
- 3979
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TCCGGTGTAACGTTCGGGCTCCGTCTCAGGGGCTGAAGTTTGTGAGGTGTAGTATTGAGTCCTGTTTGAGCTAT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGTTCTCTTTTTCCTGAAAAATGGCACTGTCAAAGAGGGAGCTGGATGAGCTGAAACCATGGATAGAGAAGACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTGAAGAGGGTCCTGGGTTTCTCAGAGCCTACGGTGGTCACAGCAGCATTGAACTGTGTGGGGAAGGGCATGGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAAGAAGAAGGCAGCCGATCATCTGAAACCTTTTCTTGATGATTCTACTCTCCGATTTGTGGACAAACTGTTTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGGCTGTGGAGGAAGGCCGAAGCTCTAGGCATTCCAAGTCTAGCAGTGACAGGAGCAGAAAACGAGAGCTAAAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAGGTGTTTGGTGATGACTCTGAGATCTCTAAAGAATCATCAGGAGTAAAGAAGCGACGAATACCCCGTTTTGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGAGGTGGAAGAAGAGCCAGAGGTGATCCCTGGGCCTCCATCAGAGAGCCCTGGCATGCTGACTAAGCTCCAGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCAAACAGATGATGGAGGCAGCAACACGACAAATCGAGGAGAGGAAAAAACAGCTGAGCTTCATTAGCCCCCCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACACCTCAGCCAAAGACTCCTTCTTCCTCCCAACCAGAACGACTTCCTATTGGCAACACTATTCAGCCCTCCCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGCTGCCACTTTCATGAATGATGCCATTGAGAAGGCAAGGAAAGCAGCTGAACTGCAAGCTCGAATCCAAGCCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGCTGGCACTGAAGCCAGGACTCATCGGCAATGCCAACATGGTGGGCCTGGCTAATCTCCATGCCATGGGCATT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCTCCCCCGAAGGTGGAGTTAAAAGACCAAACGAAACCTACACCACTGATCCTGGATGAGCAAGGGCGCACTGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGATGCAACAGGCAAGGAGATTGAGCTGACACACCGCATGCCTACTCTGAAAGCCAATATTCGTGCTGTGAAGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGGAACAATTCAAGCAACAACTAAAGGAAAAGCCATCAGAAGACATGGAATCCAATACCTTTTTTGACCCCCGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GTCTCCATTGCCCCTTCCCAGCGCCAGAGACGCACTTTTAAATTCCATGACAAGGGCAAATTTGAGAAGATTGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCAGCGATTACGGACAAAGGCTCAACTGGAGAAGCTACAGGCAGAGATTTCACAAGCAGCTCGAAAAACAGGCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCCATACTTCGACTAGGCTTGCCCTCATTGCTCCTAAGAAGGAGCTAAAGGAAGGAGATATTCCTGAAATTGAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGGTGGGACTCTTACATAATCCCCAATGGCTTTGATCTTACAGAGGAAAATCCCAAGAGAGAAGATTATTTTGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AATCACAAATCTTGTTGAACATCCAGCCCAGCTCAATCCTCCAGTTGACAATGACACACCAGTTACTCTGGGAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TATATCTTACCAAGAAGGAACAGAAAAAACTTCGGAGACAAACAAGGAGGGAAGCACAGAAGGAACTACAAGAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AAAGTCAGGCTGGGCCTGATGCCTCCTCCAGAACCCAAAGTGAGAATTTCTAATTTGATGCGAGTATTAGGAAC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGAAGCTGTTCAAGACCCCACGAAGGTAGAAGCCCACGTCAGAGCTCAGATGGCAAAAAGACAGAACCCTGCCT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CTGATCTTCAATGCCTTTCTCACTTGTGGATGTCCTTCCTGTCACGACAGAGCGCATGAAGAGGCCAACGCTGC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CCGAAAACTCACAGCAGAACAGAGAAAGGTCAAGAAAATTAAAAAGCTTAAAGAAGACATTTCACAGGGGGTAC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ACATATCTGTATATAGGTAGGTGTCCATACTGGGCCAAACTTCCCCTTAGAATTACTAAAACATTTTCCAAGTG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CTTGAGGCAGAATCATTGTGGCCTAAAAGCATACCTAACACCAGTTCCTACTCTCTTTTAATGACCCTAGTGTG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GATCAAGAGCTAGTAAATCTTGTAAAATAGCGAGAGTTAATGACTTATGTTTATGGTTACCCAGTTCTTCCCTC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TCAAGTCTTCTTTTTTTTTTTACCAGAATATTAGTTCTGAACAAGTCAATATACTTGTTCAGGCCAAGATGTGA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ACTAAAGATTGTATGTCCTTTGAGAACTATAAAATATCATCCTATTTCTTTTTTTTTTCATCTTTTTTTTTTTA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AATGGTCTGAGTTTGCTTCCAACATCCATGGAAGCATTACAAATTTTCTTTCCTCCGTAGTCATATCCTTACCC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TGATGTATTGCTGTGTTTCATCCTCACTCCAAAATGCATTTTATATGTTGTAAATATTTTTCTACCTTTGTGTT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GATTTAATGTTTTTATTCTTTTATGTTGAGTACATGTGTATCTTCTATTTTTAAAATGTGCTTATTTCTATTAA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CTAGTTCTTTATTATAAAAGTGGTACATTATCACAAAAATAGTGAATGCTTATTAAGATTTAAAAAATTGTCTG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ACAACACAGAAGAATACTTACTCAAAATGTCTCCTTTCTATTCTCTGATCCCTTAGAACCACTCTCTTTAGGTA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 ATTGCTATTAACAGTTTTTCACATATCCTCCTAGAAAATTTTCATGCCTATATAGTGATCCTATATATATATTT 2590
Query 1 -------------------------ATGGAGTCTCATTC-TGTCGCCCAGACTGGAGTGAAGTGGCATGATCTC 48
|.|||||.|||.|| |||.||||||.|.||||||.|.||||..||||||
Sbjct 2591 TATTTATTTATTTATTTATTTTGAGACGGAGTTTCAGTCTTGTTGCCCAGGCAGGAGTGCAATGGCGCGATCTC 2664
Query 49 GGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAG 122
.||.||||||||||||||||||.|.||.||||||.|||||||||||||.||||||.||||||||.|||||||||
Sbjct 2665 AGCGCACTGCAACCTCTGCCTCCCAAGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTAGGATTACAG 2738
Query 123 GCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCT 196
||||.|.|..|||.|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 GCACGCACCCCCACGCCCGGCTAA---TTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCT 2809
Query 197 GGTCTCGAACTCCTGACCTCAAG--------------------------------------------------- 219
|||||..|||||||||||||..|
Sbjct 2810 GGTCTTAAACTCCTGACCTCGTGATCTGCCCACTTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACC 2883
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2884 GCACCCAGCCAAGTAATCCTATATTATAAGAGTCTAAGGGTCTAGAGGACAAAAAGTCTGTAGGTCTTTACATT 2957
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2958 GTCAAGAACAATGAGATTGTAAGTATTTTTGGATGATAGTAAATACCTCTCCCTGACTCTTAGAGTAAACTTTG 3031
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3032 GTTAGTAATGTAATGGTTAATGTAAAGTGCTAGACTTTGAAGAAATGTAAGAGTGTGGAAATATTTCTAGACTC 3105
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3106 ATCAACTCTACCTTTTAAGCATTCATCTATTTGTTTACTCCAGAGGCCTTTGTTTATAGAGAGGAAACCATTTT 3179
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3180 GGATTCATCTTTTTACTTGCCACTCCATTCAGGCAGCTGCTGATGCTAAAATGGAAGACATAACTAAACTTTCC 3253
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3254 CTTCTCCAGAGTTCGAAATTTGAGCAACCCAGCCAAGAAGTTCAAGATTGAAGCCAATGCTGGGCAACTGTACC 3327
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3328 TGACAGGGGTGGTGGTACTGCACAAGGATGTCAACGTGGTAGTAGTGGAAGGGGGTGAGTCTGAAAAACTTGAG 3401
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3402 GGAGACTGTCCCCAGACAACCCTAGGCTTAGAGTGATTAGCATTGTGGGGAGAAAGGAGAAAAAGATCGTATTT 3475
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3476 TAGTGCCATACCTGATATAATATGCTAGGTCTCTGCTTCTGTGTTTTTTGGAGTAGAAGGCCCTAAGATGTGGT 3549
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3550 TCCTGAGATTGCTTCAACTACCACATTAATGTCTGAGCTCAGAGGTTCTTTCTACCCCATCATCTTCCACAGTT 3623
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3624 CTGGCAAAATTATTCTTCTCTGTTTCCAGGCCCCAAGGCCCAGAAGAAATTTAAGCGTCTTATGCTGCATCGGA 3697
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3698 TAAAGTGGGATGAACAGACATCTAACACAAAGGGAGATGGTGAATGGGGATGATGAGGAGTCTGATGAGGAAGC 3771
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3772 TGTGAAGAAAACCAACAAATGTGTACTAGTCTGGGAGGGTACAGCCAAAGACCGGAGCTTTGGAGAGATGAAGT 3845
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3846 TTAAACAGTGTCCTACAGAGAACATGGCTCGTGAGCATTTCAAAAAGCATGGGGCTGAACACTACTGGGACCTT 3919
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3920 GCGCTGAGTGAATCTGTGTTAGAGTCCACTGATTGAGACTACTGCAAGCCCTTGCCTCTCCTCCCTTGCCTTTG 3993
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3994 TCTCTTCAGTCCTCTCACTTATTCTATTTCCCAACCCCCTCCCACTTGTTTGTGTGATCTCAGAACTGTGCCAA 4067
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4068 GCAGACACTGGGACAAAGGGAGAATATCTTGCTCCCCTCCTGAGTCAGCCTGGTGTTGCCCTTTATTCCCCTTA 4141
Query 220 --------------------------------------------------- 219
Sbjct 4142 TGTGCATATGATTAAAGAGTTATTTTTAAACTTGGTGTGATATTTTTCACA 4192
