Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- XR_242802.3
- Aligned Length:
- 4477
- Identities:
- 190
- Gaps:
- 4261
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GACGCCGCGCACGCGCAGACCCAGCGCCGAGCCCGAGCCATGGCGTCCGAGCGGCTCCCTAACAGGCCCGCCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCTGCTCGTGGCCAGCGGCGCCGCCGAAGGTGTGTCGGCCCAGTCCTTCCTCCACTGTTTCACGATGGCCAGCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGCCTTCAACCTGCAGGTGGCCACCCCTGGGGGGAAAGCCATGGAATTTGTGGATGTGACTGAGAGCAATGCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGCTGGGTGCAAGACTTCCGCCTCAAGGCTTACGCCAGCCCCGCCAAGCTCGAGTCCATCGATGAACCCATCTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGCCGTCGGCCACGGTGTCGCCGCCCTGTGCTGTGCCACCAACGAGGACAGATCCTGGGTGTTCGACAGCTACA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCCTGACAGGGGGCCTGGGCCTGTCTCAGGAGCCCCCACCCCGCTCCCGCAGCCCTCTGTGTGTGAGCTCGTCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGGCCCCCGGCTTCGCCCGCCTGCCGCTCGTGGTGGAGGACTTCGTGAAGGATTCGGGCGCCTGCTTCAGTGGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAGCCTCGAGGGTGCCCCCTGCACTTACAGAAGATGGGGTGGGGGGCTTCCCTGCTGCAGCCTGGGGGAGAAGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTCCTGGGCCCTGGGTTCTATAGACCCCCATGGCACTGACTCAGACCCAGACAGGCTGACCTACTGCTGACCCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGGAGCCCGCCTGGAGTTCGAGGCTCTCAGTGGGTGAGGTGGACATTGCCTGAGGTTGGTGCCCTCGGTCCTCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCAGCAAGCGAGCCTGACGCTGTCCACGTCGTGCTGGACCGCCACCTGGTCACAGGCCAGAATGCCAGCTCCAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGTCCCGGCCGTGCAGAACCTGCTCTTCCTCTGTGGCAGCCGGTGAGGGCACCAGGGTGGGCACATTCCTGCCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CATCAGAGCTGCACCCGGTGCTTTTGCCCAAGCTTTGACCACACGTCTGTCCTGCAGGAAATGAACCTGCTGGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TAGATGCACCCCCTGAGACAGCCCAGGTGTCTCCAGAGGCAGCCCCGTCTCAGGCTTCAGGGACCCCGCCTCTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCCTCCTGACAAGGGCCCTGGATGGCAGCCTGGTCTGGCCCTGATGGGATTGTTGGAGGCCTCCTGGAATCAGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCTGAGGGGGTGTCGGCTCTCCTGGAGGGTCCAAACCCCCATCCTCCTGCATGTTCTCTGGTAGGAGGCAGAGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAAGACCCCACGTGCCTGGAGAGCTGTGCTAGCTGCTAGGTGGTCCTCGGGAATTCCAGGCTGGGTTTTCTAGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GAGGACTGGTTGTCACGTGTGGTCACTGTTGACTAGACAGAGTCGGCTCGGGGGTCCTCTGTGTGGGTTTGCCC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGCTGTGGCCTGTCTGCCACCCACCACCTCTTTCACTGTTGGTGGGGGCCTTGAGGGGAGGGCCCAGCCGGCGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GAGCTGGCTCAGAACTTTGGCCAAAGGTGAACGGAATTTTTTAGGAGCAGCAGCCTCCTGCCCCAAGGCCGACC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGCACTGGCAGCACTTTCCTGTTGAAGAAATCTTCCTGGCGTGTGGTTTCAAAGTGTAAGCACCTCAGTGATGC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ACCCTGTCCTAAGCATTGAGAGGCACGTTTACTTGTGAATATGAGACCATGAGATTCTCAATGATAGGAAAGTG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CTGTCCCCCACGGCCTTGCACAGTGGCCTCGGGTAGAGCGGCTATCAAGAGCAGACAGTGGTCCAGCCTGCTGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GCACCTGGCCTGGGCTGTGGCCCTCCAGCGGGCTGCCCCCTGGCCCCAGGTTAGGGCGTCCAGGAGAGGCTTAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GCCCTCTACTTCCTCACAGTTCCCCAGTTTGAGCCATCGAAGGCCTTCTTCCTGCCCACCTCCCCGTCTCAGCC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ACAGCCGTTCCCAAGCACCAGCGTGGCTCCTGGTGCCAGTGACCTGCCAGGAGGCCCCTTGTGATTATAAAACC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GTTCAGTTGGGCCGGGCGCAGTGGCTCACACCTGTAACCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AGGTCAGGAGATCGAGACCATCCTGGCTAACATGGTGAAACCCCATCTCTACTAAAAAACAAAAATACAAAAAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TTAGCCTGGCATGGTGGTGGGTGTGTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GGGAGGCAGAGCTTGCAGTGAGCTGAGATCGTGCCACTGCACTCCAGCCTGGGCAATAGAGTGAGACTCCATCT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CAAAAAAAAAACGTTCAGTTGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GGTGGATCATCTGAAGTCAGGAGTTTGGGAAAAGCCTGGCCAACATGGTGAAACTAAAATACAAAAATGAGCCG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GGTGTGGTGTCAGGCGCCTGTATTCCCAGCTACTTGGGAGGCTGAGACGTGAGAATTGCTTGAACCTGGGAGGC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GGAAGTTGCAGTGAGCCAAGATTGCGCCATTGCACTCCAACCTGGGCAATGAGTGAAACTCCGTCTCAAAAATA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AAAAATAATAAAATAAAGCCGTTCAATAAGGAGAATTTGGAAAAAAGTGGAAGAAGGAAGCGCTGCAGCCACAT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CCCCGCCCTGAAGGCTGCGTCCCTCCAGTGCCTCGCAGATTAGTCAGGATGCCCACTTAGCACTGGCCACGGGG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CCTTGCTCTGTCCCGGGTCCACTCTCATCCCCGTGTGGTGATGGACCTCTGTGGACAAATGCTTTTTATTTTAT 2738
Query 1 ------------ATGGAGTCTCATTCT-GTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAAC 61
|||||||.|...||| |||.|||||.||||||||.|||||||..||||.|||||||||||||
Sbjct 2739 TTATTTTTTGAGATGGAGTTTGTCTCTCGTCACCCAGGCTGGAGTGCAGTGGCACAATCTTGGCTCACTGCAAC 2812
Query 62 CTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCA 135
|||||.|||.||.|.||||||||||||||||||||.||||||||||||||||||||||||||....|||.||||
Sbjct 2813 CTCTGTCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCGGAGTAGCTGGGATTACAGGTGTGCGCCACCA 2886
Query 136 TGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCC 209
.|||.|||||| |||||||||||||.|||||||..|.|||||||||||||||||||||||||||||||||||
Sbjct 2887 CGCCTGGCTAA---TTTTTGTATTTTTCGTAGAGACCGAGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCC 2957
Query 210 TGACCTCAAG---------------------------------------------------------------- 219
||||||||||
Sbjct 2958 TGACCTCAAGTGATCCTCCCGCCTCGGCCTCCCAAAGTGTTAGGATTACAGGCGTGAGCCACTGCGCCCGGCGT 3031
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3032 AATTTTTGTTTTTAGTAGAGATGGGGTTTCATCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGAT 3105
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3106 CCATCTTCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCGCCACGTCCGGCTAACAAGTACTTTTTT 3179
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3180 ATTTTTATTTTATTTTTTGGATGGAGTCTCACTCTGTCGCCCAGGCTGGAACACAGTGGCACGATCTCGGCTCA 3253
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3254 CTGCAGCCTCCGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTAGGACTACAGGTGCAC 3327
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3328 ACCACCACACCCAGCTAATTTTTGTATTTTTCCTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTTGGCAG 3401
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3402 GCTGGAGTGCAGTGGCGCGATCTCAGCTCACTGCAACCTCTGCCTCTGCCTCCCAGATTCAAGCTGAGGCAGGT 3475
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3476 GGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAAGATGGTGAAACCCCGTCTCTACTAAAAATACAGA 3549
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3550 AATTAGCCGGGCGCGGTGGTGGGCGCCTGTAATCCCATTTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAAC 3623
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3624 CCAGGAGGCGGAGGTTGCAGTGAGCTGACATCGTGCCACTGCACTCTAGTCTGGGTGACAGAGCAAGACTCCAT 3697
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3698 CTCAAAAAAAAAAAAAAAGAAAATATTGTAAACCTAGTGGCTTATAAACAACAGAAATCAGTTTCAGTTTTGGA 3771
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3772 GGCTGGAAGCCCAAGATGAAAGCACCAGTAGATGCAACCTCTTTTGTGAGGGTGATGGTCCCATGATGAGGCTG 3845
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3846 TGCCCCTGCCCTGTGACCGGATGACCTCCCAAATGCCCCACCTAATACCATCCCCTTGCAGGTGAGGACTTAAG 3919
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3920 CAGGTGGGTTTTGGGGGGACGTGCTCAGGCCACAGCAGGGTGCATGAAGAGCCAGTGAGCCTCATTGAGCCCCT 3993
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3994 CTGGTCAGCCAGATCTGACATTGAGCCCAGCATTGAAGATCAAAGCAGGTGGGGCTTTGGGATGTGAAGTGGGT 4067
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4068 TCTGACGCGGGGCCCCACAGACCTGTCTCCGCGTGAGCTGCCTGCAGGCCCCTGCGTCATTCCTCAGCTGCGTG 4141
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4142 CGAGGCCTCTGGCTTGGAGAGCCTCCCCGCTGTGCACAGTTCTCTCTTTGCCAGGGCAGGGCTTGGGGCAGCAC 4215
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4216 CAGGCTGGGGCAGAGGAGGAAAGCAAGAGGACAGACCTCCAGAAGAGCAGCGGAGGGCGGGTGAGGATTTCCCC 4289
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4290 ATATACCAGTGTGTGTTCATCTACCCATGAGGAATAAAACCATGCAGCAGCATGCAAATGGTGTCCTGGTGTTC 4363
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4364 GCAGCAGAACTGCTCATGGTAATGGATAAGTTGTTTTCATACAGTGGGTTGTCAATATGTTTAATAATTGTTGG 4437
Query 220 ------------------------------------- 219
Sbjct 4438 TATCTATTAATAAGGGCAATATATTCATATGGTGGAT 4474
