Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- XR_931812.3
- Aligned Length:
- 4029
- Identities:
- 188
- Gaps:
- 3814
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TAGGCTGGAGTAGAGTGGTGTGATCTTGGCTCACTGCAACCTCCGTCTCCCAGGTTCAAGCGATTCTCCTGCCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAGCCTCCCTAGTAGCTGAGATTACAGATGTGTGCCACCACGCCTGGCTAATTTTTGTATGTTTAGTAGAAACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGTTTCACCATGTTGGCCAGGATGGTCTCGATCTCCCAACCTCAAGCGATCTGCCTGCCTTAGCCTCCCAAAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGCTGGGATTACAGGTGTGAGCCACTGCACCTGGCGGAAGTTCTTAACTTTAATGTAATCCAGTTTATCAGAAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTTCCTTCATGGTTAGTCTCTTTTGGAGTTGTTGTTGTTGTGTTTTTTTAAATTTAATTTATTTATTTATTTAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTATTTATTTGAGACAGTGTCTCATTTTGTTGCCCAGGCTGGAGTGCAACCTGGGCTCACAGCTCACTCATCTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACTGCAGCCTCATCCTCCCAGGCTTAAGCAATCCTCCTACTTCAGCCTCCCGAGTAGCTGGGGCTGTAGGTGTA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGCCACCATACCTGGCTAGTTTTGTATTTTTTGTAGAGATAGGGGTCTTGCTTTGTTGCCCATGCTCATCTCAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCTCCTGGCCTCAACTGATCCTCCTGCCTGGGCCTCTCAAAGTGCTGGGATTATAGGCATGAGCCAACGTGCCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGCCCGTTAGCCCTTTTGTAACTTAAGAAATGTTTTGACTATTACAAGGCCATGAATATAGTCTTTCATTTTTA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCTTTGAGTTTTATTATTTTACCTTTTACATTTAAATCTACAGTCCACCTGGAATTGATTTTTAGGTATGACAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAGGTAGAGGTCAATATTGTTTTTGTTTTTTTTTTTCCCCAGATGGATATCAAATTAATCCAGAACAATTTATT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TAAAAGACTTTCCCTTTCCAGCTACTCTACAGAGCCAATTTTGTCATAAGTCAAAGATTCATGTGTGGATATGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTCTGGACTTTCTTTTTTGTCCTGTTGGTCTCTTTGTAAGTCTTTAAGTCACTCTCTTCATTCTCATAACTTGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGGTCTTGCTATCTGATAGTGAAAGTCTTCCACTGTGTTGCTTCTCCAAGAGTCTCTTGGCTTTTCCTGGTCCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTGCATTTCATTTAATTTTAGAATTAGCTTGCCAATTTCTACCAAAAAAAAAAGTGATGGAATTTTGATACATG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGATGAATAAATTAATTGGAGGAGAACTGCTATCTTTACAAGATTCAGTTTTACAATCCTTGAACGTGGTATGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCCTCCATTTAACCAAATGTTTTATAGTTTTCCGTGTAGCGGTCTCATACATCTTGTGTTAGATTTAGTCCTAG 1332
Query 1 ----------------------------------------------------------------ATGGAGTCTC 10
|..|.||.||
Sbjct 1333 AGAACTATACTAATATAAATGGTAACTTTTTAAATTTTCCTTTTTTTTTTTTTTTTTTTTTGAGACAGCGTTTC 1406
Query 11 ATTC-TGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAG-GTCAAGC 82
.||| |||.||||||.||||||||.|.|.|..||||||.|||||||||||||||||||||| |.|| .||||||
Sbjct 1407 CTTCTTGTTGCCCAGGCTGGAGTGCAATTGTGTGATCTTGGCTCACTGCAACCTCTGCCTC-CCAGATTCAAGC 1479
Query 83 GATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGT 156
||||||||||||||.|.||||..|||||||||||||.|||||||.|.|.|||||||||.||||| |||||||
Sbjct 1480 GATTCTCCTGCCTCAGTCTCCCAAGTAGCTGGGATTTCAGGCACCCACCACCATGCCCAGCTAA---TTTTTGT 1550
Query 157 ATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG----------- 219
||||||||||||||.||||||||||||||||||||||.||||||||.||||||||||||||||
Sbjct 1551 ATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGACTGGTCTCCAACTCCTGACCTCAAGATAATCCTCCC 1624
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1625 ACCTCGACTTCCCCAAGTGCTGGGATTTGGGATTACAGGTGTGAGCCACTGCACCTGGCCTAAAATGTTCCATT 1698
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1699 TCTAATAAAATTTTTAGAAGAGTCCATTTACATGATTTACTATTTATATAGAGAGATGTAATTCCTTTTTTTTT 1772
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1773 TCCTTTTTCTTTCTTCTTTTTTTTTTTGAGACAGCATCTTGCTCCGTTGTCAGGCTGGAGTGCAGCAGCATGAT 1846
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1847 CTCGGCCACTGTGTGATGTGTTAGAGATACTCTTTATTAGTTAAGAAAATTCCCTTCTCTTCCTAAGTTGCTGA 1920
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1921 AAGGGTATGGGTATTGATTTTGTCATGTTTTTTTCTGCATCTATGAAGCTATATAATTATATAATTTTTCATCT 1994
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1995 TTATTGATATTTATCTTTATTCCCATTTATTGATTTGGGGATGTTAAGTCAATCTGTCTTTCCTGAAATAAACT 2068
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2069 TAACTTGACAGTGTTATATTATTCTACCCATAATTATTTTTAAGATTTTTTTTGCATCTGTGTTCATGAGAGAT 2142
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2143 TGGTTTCTAATTTTCTTATCAAGTTTGGTATCAAGGTTATGCTAAAAATCAGCTGGGTGCAGTGGCTCACGCCT 2216
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2217 GTAATCCCAGCATTTTGGGAGGCTGAGGTGGCCGGATCACCTAAGGCCGGGAGTTTGAGACCAGCCTGGCCAAC 2290
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2291 GTGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCTGGGTGTGGTGGCACAAGCCTGTAATTCCAGCTA 2364
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2365 CTTGGGAGGCTGAGGTAGGAGAATCACTTGAACCCAGGAGCTGGAGGTTGCAGTGAGGCAAGATCAGGCTACTG 2438
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2439 CACTCCAGCCTGGGTGACAGAGCGAGACTTCGTCCCAGAAAAAAAAAAAAAAAAAAAGGTTATGCTAAAATCAA 2512
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2513 AATGAGTTAGAAAGTATTTCTTATTTTCTTCTTCCCTGGAAGAGTTTATGTAAATTAATGCTGTTTGTTTCTTA 2586
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2587 AACATTTGGGTGACAATTATTTTGATGAAATGCATGAGAACTAGTTTTGTGGACCATGTTTTGGAAAACAGTGG 2660
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2661 TCTAGAGCATGACTGAAATATGAAATAGTGAATTTCTGTCCGTGTGAATGCTCTTGTTTTTATTCATTTCCTTC 2734
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2735 CTTTATGCAGCACTGGCCCCCTCACCTTTTCCTTTCCAGCTGTTTGGGGCTCAGCTAAGTGACCACACAGGAGA 2808
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2809 GCAGTGAGGCCATTTGAGGCCTGAGCCTGGTCCTCAGGACTCGACTCTCTCTCCCTGCCATCAAGCAGCCTGCC 2882
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2883 CCAGCCCTGCCAGCCATCTCCACACTCCTGACAGAATGAATGCCCTCGATGGTGTTCCTTTCAAGTTGCCCAAG 2956
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2957 GGCTTTGTGATAGGCACAGAGCCTCTCCCTGGGCCAGAACTCAGCGTCCCGGCCTGCGGGGAAGTTCTGCTGGG 3030
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3031 TTCTATGCACGACTTCAGCCTGGAGAGGACGGCACTCTTCTGGGTGGAGGCCGCCGGCCAGGGACCCAGCCCGT 3104
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3105 ACCAGTGCGGTGACCCGGGGACAGCGTCAGCCCCTCCAGCCTGGCTCTTGCTAGTCAGCCCCGAACATGGGCTG 3178
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3179 GCGCCTGCGCCCACCACAATCAGAGACCCGGAGGCCGGACACCAGGAGAGGCCGGAGGAGGAGGGTGAGGACGA 3252
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3253 GGCAGAAGCCTCCTCTGGCAGCGAGGAAGAGCCGGCCCCCAGCAGCCTCCAACCGGGCTCCCCGGCGAGCCCCG 3326
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3327 GCCCCGGCCGTCGCCTGTGCTCGCTGGACGTGCTACGCGGCGTGCGGTTGGAGCTGGCAGGGGCGCGGCGGCGG 3400
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3401 CTCTCCGAGGGGAAGCTGGTCTCCCGGCCCCGCGCCCTCCTGCATGGCCTCCGCGGCCACCGCGCGCTGAGCCT 3474
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3475 GTGCCCGAGCCCTGCGCAGTCCCCCAGGTCTGCATCACCCCCGGGGCCCGCGCCCCAGCACCCCGCCGCCCCCG 3548
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3549 CGTCGCCCCCGCGGCCCTCCACGGCAGGCGCCATCCCCCCGCTGCGGAGCCACAAGCCTACGGTCGCGTCCCTC 3622
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3623 AGCCCGTACACCTGTCTGCCACCTCTTGGGGGGGCACCCCAACCTCTCAACCCCCACAAGTCACACCCTGATAC 3696
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3697 TGCGGCTGACCTGCTGTCCGCCCTGAGCCAGGAGGAGCAAGACCTCATTGGGCCAGTGGTCGCCCTGGGATATC 3770
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3771 CCCTGCGAAGGGCCATCATAGCTCTGCAGAAGACAGGGAGGCAGAGCCTGAGCCAGAGTTCACTCTATTGGAAG 3844
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3845 TATGGCGGAGACTCATGATGACACTCCAAGGACAGCACTCTGAGCCACGCTACTATTTGGAAGCAGGTCTTGAC 3918
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3919 CCCTGATACAAGCCAAGAATTTTCTCAGCTACCTCAGTGCCTGTGACCGCCTGTTACGTCAGGGATATGAGGAA 3992
Query 220 --------------------------------- 219
Sbjct 3993 GGCCTGGTGGATGAGGCCATGGAGATGTTCCAG 4025
