Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- XR_946980.3
- Aligned Length:
- 3052
- Identities:
- 188
- Gaps:
- 2836
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CACGCCGTGAAGTCATAATCCTGTGTCTGTGACACCCTGTCGGTTGCTATGGAAACGACTCGCTGTTAAACACT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCGTTCTCAATGAGGGTTGCAGGGGTTCCGAGGCGGACCTGGGGAGCAGAAACCCCTGTTTAGGGTGAACCGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCGGGCGCCGATGGCCTCTTGGAAGAGGACAGACTAGCAGCTGCGAGGGAGATGGGACTGGGTTTCACCCCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAAGGGCCCCTGGAGACAGCGGGTGAGGGACAGGGGAAGGGGCTGGTGGTCCTCTCTCCCGAGGCCCCGCACCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCACACGGATGACTTGGCACAATAGCTGCTGGGCCAGTGTTGTCGCCTGTGACTGTACTTTAGGGAAACTGACA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGGAGATCATGATGTCGCCATTTTGATGGGGTCCCCAGAGGAGAGATGTCCTCCCCAACGGCTCCTGGACAGGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTGGGGAAAGAGTTCAGATAAGTATCTCTGTGGTCTGGGCTGTCACCTTACAACTGCACAACTCTGGACCTCCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCATCAGAACCACTGGGGCCTAGGTTAATAATACAGATTTTCAGGCTCCAATTTGGACAGACGAAACTGATCTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGGGGTGGGACCCAGGAATCTACGTGTAAACAAGCACCCAGGGGAGTTCTGCTCACTGAAATTTGAGAATCCCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GATTTAGAAGGAGGACTATGCTCTGTGCATGTTCTCTGAAATGTTGGGTCAATCAGGACCTGTCTACTGAAACT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCTCCAACCAGCCAAGGTGCAGAGAAAAGATGCGTGCAGGGCCGAAAACCAGGGTGCTCTGGAGGCAGGGAGCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTCGAGAATGTAAAGCCAGCAAGCTGTTACAGAGTGATTTGCACAGAACAGACACTCAGTTGATATTTGTCAAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTGCTGTGTTTAAGAACCTTGCTGAATTAATTTAAAAGGTATTTTTAAAAGAATGAAATTGAGGAAAAAACCTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAAGGTTCAGAAAATGTGAAGTTCTCATTTACTTGTTTATGAAATTGTTTTTGAGTCCAATAAAGATGCTCAGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TAAAATGGTTTTTTTGTTTTAAATCTCAGAATTAAGTTTCTCTTAGTTTTGGGCAGTTCGGTCCAGCTACTTGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAAAGACAGGCTTCCATATCTCCTGTATGCAGCCCTGAAGGACCCAACAGAAGTAAAATAGTTATTTAAGGAAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCAAAGGACTAGGGACAGGATGCAGATTAAAATGTTTAAGATGATGTCTGCAGATGATGTTTGTAGATGCTTAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GTTTGTTGAATTCTTAGTCTTCCTCACAAAGCAGCTAATTACTTTCAAGACTCTAGTGAGCCTCAATTTACTCC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AATTTATGATTTCCAATGGTTCTGCATAAAACTGGGTTGCCGTTTTATGAAATTGTTTGCATCTGCTTGACGTG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGCGCAAACTTCACAGTGAGGAGATAATGTGAGGGTTTTGCCTTCTTGCAAAACAACTTACATATATATGTGAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AAAACTGGGGTTGGGGTTTGAATTATGTGGACTGCCTGTGCGTAGTAAGCTCTCTGGTCAGTTACCTATTTGGC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTTGTGTGGACACAGCTCTTAGGAGGGAGGGTGGTGGAATTCCTGCTCATTACCTATAGTATCTTGCAGGAGGG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CTGCTGAACGCCGGAGCCTTACAACTGTTAAACTCAGGCAGAGCTCGGGAAATGCTGCCCGGATGGGTGACTGA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGGAGAGGGGCTACCACTCTTCCAGCTAAACTCCGCTCTGGTTGGGACCCAGCAATTATTTTCCATAGCGAAGT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GTTAATAAAATATCTGTTACTCCCAACACAACCTCCTGGGGGAAGGGACCTGTCTGTCTGCTTCAACTTTGGAT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CCTCAGTGCCCACATCAGGATACCTGGCCTGAGAGAGGGTCCTGCCGGTATTACCCTGGAGGAAGGAATGCTGC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ACAGAGGCCGAGAGGAATTTGAACAGACTGGCCTTGCTGGGTTTTTATCTCTTTTTGTCCAATCCCATTTTGAC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ACAGTTGTCCATGCTCCAATCATGCTTATCCAATGAAGTTTCCATAACAGGCCTGAGAGGACAGGGTTCAGGAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CTTCCGGACAGCTGAGCAGGTGGAGGTTCCTGGAGGGTGGTGTGCCAGGGAGGGTGTGGAAGCTCTGCCCCTTC 2146
Query 1 ----------------------------------------------------------------ATGGAGTCTC 10
|.|||||||.
Sbjct 2147 CCCCATACCTTGTCCTATGCATTCCTTTATCTGCATCCTTCATTTTATTTTATTTTTTTTTGAGACGGAGTCTT 2220
Query 11 ATTC-TGTCGCCCAGACTGGAGTGAAGTG--GCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAG 81
..|| |||||.||||.|||||.||.|||| ||..|||||.|||.||||||||||||.|||||.||||.|||||
Sbjct 2221 GCTCTTGTCGTCCAGGCTGGAATGCAGTGGTGCGCGATCTTGGCGCACTGCAACCTCCGCCTCCCGAGTTCAAG 2294
Query 82 CGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTG 155
.|||||||.|||||..||||||.||||||||||||||||||||||.|||.|||||.||.|||||| ||||||
Sbjct 2295 AGATTCTCTTGCCTGAGCCTCCCGAGTAGCTGGGATTACAGGCACCCGCCACCATCCCTGGCTAA---TTTTTG 2365
Query 156 TATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG---------- 219
|||||||||||||||||||||||||||||||||||||||.|.||||.|||||||||||||||.|
Sbjct 2366 TATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGTTAGTCTTGAACTCCTGACCTCAGGTGATCCACCC 2439
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2440 ACCTCAGCCTCCCAAAGTGCTGAGATTACAGGCGTGAGCCACAGTGCCCGGCCTGTATCCTTTATAATATCTTT 2513
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2514 TATAAACAACCAATCAGTAAATGTGTTACTCTGACTTCTGTGAGCTGCTCTAGCAAATTAATCAAATCCACAGA 2587
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2588 AGGGTCATGGGAACCCCAACTTGAAGCCTGTCCGTCAGAAGTTCCAGAGTCCTGGACTTGTGACTGGTGTCTGA 2661
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2662 AGTGGGCAAGTCTTGGGGACTGAGCCCCTAGCCTGTGGGATCTGATGCTATCTCCACATAGATAGCAATGGAAT 2735
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2736 TGAATTGGCGGGCACCTGGCTGGTGTCTGCTGCAGAGCTCATTGTTTGCTTAGTGGTGGAGAGAAGTCTCCCTC 2809
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2810 CACATGTGGTCACAGCATCTTCTGTCTGTGTTGATTGCTTTTGATGTTGATCGAGAGAACAGGAAAAAGCACAT 2883
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2884 TGAATGTCTCAATGATGAAGATGACAATAATCTGGCTTCTAGGTTGTTATGCGGCAGGCAACAGCTGTGCAGAT 2957
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2958 CCTAATAATCTACTCTGGGTGACAGTTTAACACAGGGGTTGGCAAATGTGGCCCACTTCCTATTTTTATAAATA 3031
Query 220 ------------------ 219
Sbjct 3032 AAGTTTTATTGAAACATG 3049
