Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12837
- Subject:
- XR_001752008.2
- Aligned Length:
- 4659
- Identities:
- 1433
- Gaps:
- 3225
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGCGCGCCGGCCCAGGAGGAAGCGAAGAAATGCCAACTCGACGTCCGCGCAGCCACTCCGGGGACACCAGGGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCGGGGGAGCAGCCTCCGGTCGCCCCAGGAGAACTTGCGGCGCGGGACCCCGCGCTCAGACGGCGCCTCCGAAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCGGCCGTCGGGAGGAGCGCTCCAAAGAACACGGGCGGCGGGAGCGGACGGGCGCGGACACCGGGGCCTCCCGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTGCGGCCAAGCAGAGTTGCCGGGCGCGGGAGCCCAGACCCGGCGGAGGCTGAGTTCCAGGCCGCGCCGAGCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCGTCAGGGTAGCTCACTGGCGCTGCGACGGGGCCGACCAGCGCCTCGGGCTCGGGAATGGCCCCGGGGCCCGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCCGGACCAACGGGCGTAACGGAAGCGCCGAGAGGGGAGGGGCGCGGAGTCCAAGACCCGGGGGCGGGGCGAGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGCGAGGCCGGCTCCCTCTCGCGCTCAGCCGGTCGCACCGTCGCCGCCGCCGCCGCCTCAGACCGCGGGCGCTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGTTGTCACGAGCCGAAGGGAGGGGGAAGGAGCCGGGAGTCTCTGCGCTCCGGCGCGCGGAGACCGCGGCGCTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCGTCACGTGCCCCTCGGTCGACCAATGATCCCCGGCGGGCGCGGTGACGTCAGAGTAGCGGCGTGGCCAGTGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAGCCGGCCCCCGTCACGTGGTCGGGCCCACTCCAATGGGCGGCGCCGGGGCGACTTGCTGTTCCCGGCGGCCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTGCGTCGGCGGTGGTTGGGTGGTAAGATGGCGGCTGTGAGTCTGCGGCTCGGCGACTTGGTGTGGGGGAAACT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CGGCCGATATCCTCCTTGGCCAGGAAAGATTGTTAATCCACCAAAGGACTTGAAGAAACCTCGCGGAAAGAAAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCTTCTTTGTGAAATTTTTTGGAACAGAAGATCATGCCTGGATCAAAGTGGAACAGCTGAAGCCATATCATGCT 962
Query 1 ------------ATGATAAAAATTAACAAGGGTAAACGATTCCAGCAAGCGGTAGATGCTGTCGAAGAGTTCCT 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CATAAAGAGGAAATGATAAAAATTAACAAGGGTAAACGATTCCAGCAAGCGGTAGATGCTGTCGAAGAGTTCCT 1036
Query 63 CAGGAGAGCCAAAGGGAAAGACCAGACGTCATCCCACAATTCTTCTGATGACAAGAATCGACGTAATTCCAGTG 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CAGGAGAGCCAAAGGGAAAGACCAGACGTCATCCCACAATTCTTCTGATGACAAGAATCGACGTAATTCCAGTG 1110
Query 137 AGGAGAGAAGTAGGCCAAACTCAGGTGATGAGAAGCGCAAACTTAGCCTGTCTGAAGGGAAGGTGAAGAAGAAC 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AGGAGAGAAGTAGGCCAAACTCAGGTGATGAGAAGCGCAAACTTAGCCTGTCTGAAGGGAAGGTGAAGAAGAAC 1184
Query 211 ATGGGAGAAGGAAAGAAGAGGGTGTCTTCAGGCTCTTCAGAGAGAGGCTCCAAATCCCCTCTGAAAAGAGCCCA 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 ATGGGAGAAGGAAAGAAGAGGGTGTCTTCAGGCTCTTCAGAGAGAGGCTCCAAATCCCCTCTGAAAAGAGCCCA 1258
Query 285 AGAGCAAAGTCCCCGGAAGCGGGGTCGGCCCCCAAAGGATGAGAAGGATCTCACCATCCCGGAGTCTAGTACCG 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AGAGCAAAGTCCCCGGAAGCGGGGTCGGCCCCCAAAGGATGAGAAGGATCTCACCATCCCGGAGTCTAGTACCG 1332
Query 359 TGAAGGGGATGATGGCCGGACCGATGGCCGCGTTTAAATGGCAGCCAACCGCAAGCGAGCCTGTTAAAGATGCA 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TGAAGGGGATGATGGCCGGACCGATGGCCGCGTTTAAATGGCAGCCAACCGCAAGCGAGCCTGTTAAAGATGCA 1406
Query 433 GATCCTCATTTCCATCATTTCCTGCTAAGCCAAACAGAGAAGCCAGCTGTCTGTTACCAGGCAATCACGAAGAA 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GATCCTCATTTCCATCATTTCCTGCTAAGCCAAACAGAGAAGCCAGCTGTCTGTTACCAGGCAATCACGAAGAA 1480
Query 507 GTTGAAAATATGTGAAGAGGAAACTGGCTCCACCTCCATCCAGGCAGCTGACAGCACAGCCGTGAATGGCAGCA 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 GTTGAAAATATGTGAAGAGGAAACTGGCTCCACCTCCATCCAGGCAGCTGACAGCACAGCCGTGAATGGCAGCA 1554
Query 581 TCACACCCACAGACAAAAAGATAGGATTTTTGGGCCTTGGTCTCATGGGAAGTGGAATCGTCTCCAACTTGCTA 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TCACACCCACAGACAAAAAGATAGGATTTTTGGGCCTTGGTCTCATGGGAAGTGGAATCGTCTCCAACTTGCTA 1628
Query 655 AAAATGGGTCACACAGTGACTGTCTGGAACCGCACTGCAGAGAAATGTGATTTGTTCATCCAGGAGGGGGCCCG 728
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1629 AAAATGGGTCACACAGTGACTGTCTGGAACCGCACTGCAGAGAAA------------------GAGGGGGCCCG 1684
Query 729 TCTGGGAAGAACCCCCGCTGAAGTCGTCTCAACCTGCGACATCACTTTCGCCTGCGTGTCGGATCCCAAGGCGG 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1685 TCTGGGAAGAACCCCCGCTGAAGTCGTCTCAACCTGCGACATCACTTTCGCCTGCGTGTCGGATCCCAAGGCGG 1758
Query 803 CCAAGGACCTGGTGCTGGGCCCCAGTGGTGTGCTGCAAGGGATCCGCCCTGGGAAGTGCTACGTGGACATGTCA 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1759 CCAAGGACCTGGTGCTGGGCCCCAGTGGTGTGCTGCAAGGGATCCGCCCTGGGAAGTGCTACGTGGACATGTCA 1832
Query 877 ACAGTGGACGCTGACACCGTCACTGAGCTGGCCCAGGTGATTGTGTCCAGGGGGGGGCGCTTTCTGGAAGCCCC 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1833 ACAGTGGACGCTGACACCGTCACTGAGCTGGCCCAGGTGATTGTGTCCAGGGGGGGGCGCTTTCTGGAAGCCCC 1906
Query 951 CGTCTCAGGGAATCAGCAGCTGTCTAATGACGGGATGTTGGTGATCTTAGCGGCTGGAGACAGGGGCTTATATG 1024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1907 CGTCTCAGGGAATCAGCAGCTGTCTAATGACGGGATGTTGGTGATCTTAGCGGCTGGAGACAGGGGCTTATATG 1980
Query 1025 AGGACTGCAGCAGCTGCTTCCAGGCGATGGGGAAGACCTCCTTCTTCCT------------------------- 1073
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1981 AGGACTGCAGCAGCTGCTTCCAGGCGATGGGGAAGACCTCCTTCTTCCTAGGTAACACGCCTGCACCTGTCAGG 2054
Query 1074 -------------------------------------------------------------------------- 1073
Sbjct 2055 CCTGGAGCCTGGGGCCACATCTCCTCTGTTTCACACTGATGACAGCGTCAGTCCCACACGGCCTTTCTGCCGGG 2128
Query 1074 -------------------------------------------------------------------------- 1073
Sbjct 2129 GACCCTGGGGAAGGTTTCCTTTCACCTGCATAGTCAGTGCGTGGAAGGAGGAAGAGCCAGTCTGTCGGGGGCAG 2202
Query 1074 ------------------------AGGTGAAGTGGGCAATGCAGCCAAGATGATGCTGATCGTGAACATGGTCC 1123
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2203 GTGAAGGGGGCCTCCCCTGGAGAGAGGTGAAGTGGGCAATGCAGCCAAGATGATGCTGATCGTGAACATGGTCC 2276
Query 1124 AAGGGAGCTTCATGGCCACTATTGCCGAGGGGCTGACCCTGGCCCAGGTGACAGGCCAGTCCCAGCAGACACTC 1197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2277 AAGGGAGCTTCATGGCCACTATTGCCGAGGGGCTGACCCTGGCCCAGGTGACAGGCCAGTCCCAGCAGACACTC 2350
Query 1198 TTGGACATCCTCAATCAGGGACAGTTGGCCAGCATCTTCCTGGACCAGAAGTGCCAAAATATCCTGCAAGGAAA 1271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2351 TTGGACATCCTCAATCAGGGACAGTTGGCCAGCATCTTCCTGGACCAGAAGTGCCAAAATATCCTGCAAGGAAA 2424
Query 1272 CTTTAAGCCTGATTTCTACCTGAAATACATTCAGAAGGATCTCCGCTTAGCCATTGCGCTGGGTGATGCGGTCA 1345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2425 CTTTAAGCCTGATTTCTACCTGAAATACATTCAGAAGGATCTCCGCTTAGCCATTGCGCTGGGTGATGCGGTCA 2498
Query 1346 ACCATCCGACTCCCATGGCAGCTGCAGCAAATGAGGTGTACAAAAGAGCCAAGGCGCTGGACCAGTCCGACAAC 1419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 2499 ACCATCCGACTCCCATGGCAGCTGCAGCAAATGAGGTGTACAAAAGAGCCAAGGCGCTGGACCAGTCTGACAAC 2572
Query 1420 GATATGTCCGCCGTGTACCGAGCCTACATACAC----------------------------------------- 1452
|||||||||||||||||||||||||||||||||
Sbjct 2573 GATATGTCCGCCGTGTACCGAGCCTACATACACTAAGCTGTCGACACCCCGCCCTCACCCCTCCAATCCCCCCT 2646
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2647 CTGACCCCCTCTTCCTCACATGGGGTCGGGGGCCTGGGAGTTCATTCTGGACCAGCCCACCTATCTCCATTTCC 2720
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2721 TTTTATACAGACTTTGAGACTTGCCATCAGCACAGCACACAGCAGCACCCTTCCCCTGAGGCCGGTGGGGAGGG 2794
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2795 GACAAGTGTCAGCAGGATTGGCGTGTGGGAAAGCTCTTGAGCTGGGCACTGGCCCCCCGGACGAGGTGGCTGTG 2868
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2869 TGTTCACACACACACACACACACACACACACACACACACACAGGCTCTCGCCCCAGGATAGAAGCTGCCCAGAA 2942
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2943 ACTGCTGCCTGGCTTTTTTTCTTCCGAGCTTGTCTTATCTCAAACCCCTTCCAGTCAAGGAACTAGAATCAGCA 3016
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3017 ACGAGAGTTGGAAGCCTTCCCACAGCTTCCCCCAGAGCGAAGAGGCTGTAGTCATGTCCCCATCCCCCACTGGA 3090
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3091 TTCCCTACAAGGAGAGGCCTTGGGCCCAGATGAGCCAGTACAGACTCCAGACAGAGGGGCCCTTGGGGCCCTCC 3164
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3165 AACCTCAGGTGATGAGCTGAGAAAGATGTTCACGTCTAAGCGTCCAGTGTGCACCCAGCGCTCCATAGACGCCT 3238
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3239 TTGTGAACTGAAAAGAGACTGGCAGAGTCCCGAGAAGATGGGGCCCTGGCTTTCCAGGGAGTGCAGCAAGCAGC 3312
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3313 CGGCCTGCAGGTGAGCATGGAGGCCCGGCCCTCACCGCCTCGAAGCCATGCCCCAGATGCCACTGCCACAGCGG 3386
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3387 GCGCTCGCTCCTCCCTAGGCTGTTTTAGTATTTGGATTTGCATTCCATCCCTTGGGAGGGAGTCCTCAGGGCCA 3460
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3461 CTAGTGATGAGCCAAGAGGAGTGGGGGTTGGGGGCGCTCCTTTCTGTTTCCGTTAGGCCACAGACTCTTCACCT 3534
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3535 GGCTCTGAAGAGCCACTCTTACCTCGGTCCCCTCCCAGTGGTCCCACCTTCTCCACCCTGCCCTGCCAAGTCCC 3608
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3609 CTGCATGCCCACCGCTCTCCATCCTCCCTCCTCTCCCTCTTCCTCCCGTGGAGACAGTATTTCTTTCTGTCTGT 3682
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3683 CCCTTTGGCCCAGACCCAGCCTGACCAACGATGAGCATTTCTTAGGCTCAGCTCTTGATACGGAAACGAGTGTC 3756
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3757 TTCACTCCAGCCAGCATCATGGTCTTCGGTGCTTCCCGGGCCCGGGGTCTGTCGGGAGGGAAGAGAACTGGGCC 3830
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3831 TGACCTACCTGAACTGACTGGCCCTCCGAGGTGGGTCTGGGACATCCTAGAGGCCCTACATTTGTCCTTGGATA 3904
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3905 GGGGACCGGGGGGGGCTTGGAATGTTGCAAAAAAAAAAGTTACCCAAGGGATGTCAGTTTTTTATCCCTCTGCA 3978
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3979 TGGGTTGGATTTTCCAAAATCATAATTTGCAGAAGGAAGGCCAGCATTTACGATGCAATATGTAATTATATATA 4052
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 4053 GGGTGGCCACACTAGGGCGGGGTCCTTCCCCCCTCACAGCTTTGGCCCCTTTCAGAGATTAGAAACTGGGTTAG 4126
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 4127 AGGATTGCAGAAGACGAGTGGGGGGAGGGCAGGGAAGATGCCTGTCGGGTTTTTAGCACAGTTCATTTCACTGG 4200
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 4201 GATTTTGAAGCATTTCTGTCTGAACACAAAGCCTGTTCTAGTCCTGGCGGAACACACTGGGGGTGGGGGCGGGG 4274
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 4275 GAAGATGCGGTAATGAAACCGGTTAGTCAATTTTGTCTTAATATTGTTGACAATTCTGTAAAGTTCCTTTTTAT 4348
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 4349 GAATATTTCTGTTTAAGCTATTTCACCTTTCTTTTGAAATCCTTCCCTTTTAAGGAGAAAATGTGACACTTGTG 4422
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 4423 AAAAAGCTTGTAAGAAAGCCCCTCCCTTTTTTCTTTAAACCTTTAAATGACAAATCTAGGTAATTAAGGTTGTG 4496
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 4497 AATTTTTATTTTTGCTTTGTTTTTAATGAACATTTGTCTTTCAGAATAGGATTGTGTGATAATGTTTAAATGGC 4570
Query 1453 ----------------------------------------------------------------------- 1452
Sbjct 4571 AAAAACAAAACATGATTTTGTGCAATTAACAAAGCTACTGCAAGAAAAATAAAACACTTCTTGGTAACACA 4641
