Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12837
- Subject:
- XR_001752010.2
- Aligned Length:
- 2543
- Identities:
- 1203
- Gaps:
- 1340
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGCGCGCCGGCCCAGGAGGAAGCGAAGAAATGCCAACTCGACGTCCGCGCAGCCACTCCGGGGACACCAGGGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCGGGGGAGCAGCCTCCGGTCGCCCCAGGAGAACTTGCGGCGCGGGACCCCGCGCTCAGACGGCGCCTCCGAAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCGGCCGTCGGGAGGAGCGCTCCAAAGAACACGGGCGGCGGGAGCGGACGGGCGCGGACACCGGGGCCTCCCGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTGCGGCCAAGCAGAGTTGCCGGGCGCGGGAGCCCAGACCCGGCGGAGGCTGAGTTCCAGGCCGCGCCGAGCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCGTCAGGGTAGCTCACTGGCGCTGCGACGGGGCCGACCAGCGCCTCGGGCTCGGGAATGGCCCCGGGGCCCGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCCGGACCAACGGGCGTAACGGAAGCGCCGAGAGGGGAGGGGCGCGGAGTCCAAGACCCGGGGGCGGGGCGAGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGCGAGGCCGGCTCCCTCTCGCGCTCAGCCGGTCGCACCGTCGCCGCCGCCGCCGCCTCAGACCGCGGGCGCTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGTTGTCACGAGCCGAAGGGAGGGGGAAGGAGCCGGGAGTCTCTGCGCTCCGGCGCGCGGAGACCGCGGCGCTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCGTCACGTGCCCCTCGGTCGACCAATGATCCCCGGCGGGCGCGGTGACGTCAGAGTAGCGGCGTGGCCAGTGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAGCCGGCCCCCGTCACGTGGTCGGGCCCACTCCAATGGGCGGCGCCGGGGCGACTTGCTGTTCCCGGCGGCCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTGCGTCGGCGGTGGTTGGGTGGTAAGATGGCGGCTGTGAGTCTGCGGCTCGGCGACTTGGTGTGGGGGAAACT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CGGCCGATATCCTCCTTGGCCAGGAAAGATTGTTAATCCACCAAAGGACTTGAAGAAACCTCGCGGAAAGAAAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCTTCTTTGTGAAATTTTTTGGAACAGAAGATCATGCCTGGATCAAAGTGGAACAGCTGAAGCCATATCATGCT 962
Query 1 ------------ATGATAAAAATTAACAAGGGTAAACGATTCCAGCAAGCGGTAGATGCTGTCGAAGAGTTCCT 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CATAAAGAGGAAATGATAAAAATTAACAAGGGTAAACGATTCCAGCAAGCGGTAGATGCTGTCGAAGAGTTCCT 1036
Query 63 CAGGAGAGCCAAAGGGAAAGACCAGACGTCATCCCACAATTCTTCTGATGACAAGAATCGACGTAATTCCAGTG 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CAGGAGAGCCAAAGGGAAAGACCAGACGTCATCCCACAATTCTTCTGATGACAAGAATCGACGTAATTCCAGTG 1110
Query 137 AGGAGAGAAGTAGGCCAAACTCAGGTGATGAGAAGCGCAAACTTAGCCTGTCTGAAGGGAAGGTGAAGAAGAAC 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AGGAGAGAAGTAGGCCAAACTCAGGTGATGAGAAGCGCAAACTTAGCCTGTCTGAAGGGAAGGTGAAGAAGAAC 1184
Query 211 ATGGGAGAAGGAAAGAAGAGGGTGTCTTCAGGCTCTTCAGAGAGAGGCTCCAAATCCCCTCTGAAAAGAGCCCA 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 ATGGGAGAAGGAAAGAAGAGGGTGTCTTCAGGCTCTTCAGAGAGAGGCTCCAAATCCCCTCTGAAAAGAGCCCA 1258
Query 285 AGAGCAAAGTCCCCGGAAGCGGGGTCGGCCCCCAAAGGATGAGAAGGATCTCACCATCCCGGAGTCTAGTACCG 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AGAGCAAAGTCCCCGGAAGCGGGGTCGGCCCCCAAAGGATGAGAAGGATCTCACCATCCCGGAGTCTAGTACCG 1332
Query 359 TGAAGGGGATGATGGCCGGACCGATGGCCGCGTTTAAATGGCAGCCAACCGCAAGCGAGCCTGTTAAAGATGCA 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TGAAGGGGATGATGGCCGGACCGATGGCCGCGTTTAAATGGCAGCCAACCGCAAGCGAGCCTGTTAAAGATGCA 1406
Query 433 GATCCTCATTTCCATCATTTCCTGCTAAGCCAAACAGAGAAGCCAGCTGTCTGTTACCAGGCAATCACGAAGAA 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GATCCTCATTTCCATCATTTCCTGCTAAGCCAAACAGAGAAGCCAGCTGTCTGTTACCAGGCAATCACGAAGAA 1480
Query 507 GTTGAAAATATGTGAAGAGGAAACTGGCTCCACCTCCATCCAGGCAGCTGACAGCACAGCCGTGAATGGCAGCA 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 GTTGAAAATATGTGAAGAGGAAACTGGCTCCACCTCCATCCAGGCAGCTGACAGCACAGCCGTGAATGGCAGCA 1554
Query 581 TCACACCCACAGACAAAAAGATAGGATTTTTGGGCCTTGGTCTCATGGGAAGTGGAATCGTCTCCAACTTGCTA 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TCACACCCACAGACAAAAAGATAGGATTTTTGGGCCTTGGTCTCATGGGAAGTGGAATCGTCTCCAACTTGCTA 1628
Query 655 AAAATGGGTCACACAGTGACTGTCTGGAACCGCACTGCAGAGAAATGTGATTTGTTCATCCAGGAGGGGGCCCG 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 AAAATGGGTCACACAGTGACTGTCTGGAACCGCACTGCAGAGAAATGTGATTTGTTCATCCAGGAGGGGGCCCG 1702
Query 729 TCTGGGAAGAACCCCCGCTGAAGTCGTCTCAACCTGCGACATCACTTTCGCCTGCGTGTCGGATCCCAAGGCGG 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TCTGGGAAGAACCCCCGCTGAAGTCGTCTCAACCTGCGACATCACTTTCGCCTGCGTGTCGGATCCCAAGGCGG 1776
Query 803 CCAAGGAC------------------------------------------------------------------ 810
||||||||
Sbjct 1777 CCAAGGACCTGATAGAAATCAGGAAATGAGCCAAAACAGCAGCAGGATTCTGATCTGAGGTCTGTAGGGCTCCT 1850
Query 811 ---------------------------------------------------CTGGTGCTGGGCCCCAGTGGTGT 833
|||||||||||||||||||||||
Sbjct 1851 GAGCATCTGCCCGGGAGCCTGGGCTATTGCTTCTCCCTTGTGTCCCCACAGCTGGTGCTGGGCCCCAGTGGTGT 1924
Query 834 GCTGCAAGGGATCCGCCCTGGGAAGTGCTACGTGGACATGTCAACAGTGGACGCTGACACCGTCACTGAGCTGG 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 GCTGCAAGGGATCCGCCCTGGGAAGTGCTACGTGGACATGTCAACAGTGGACGCTGACACCGTCACTGAGCTGG 1998
Query 908 CCCAGGTGATTGTGTCCAGGGGGGGGCGCTTTCTGGAAGCCCCCGTCTCAGGGAATCAGCAGCTGTCTAATGAC 981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 CCCAGGTGATTGTGTCCAGGGGGGGGCGCTTTCTGGAAGCCCCCGTCTCAGGGAATCAGCAGCTGTCTAATGAC 2072
Query 982 GGGATGTTGGTGATCTTAGCGGCTGGAGACAGGGGCTTATATGAGGACTGCAGCAGCTGCTTCCAGGCGATGGG 1055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 GGGATGTTGGTGATCTTAGCGGCTGGAGACAGGGGCTTATATGAGGACTGCAGCAGCTGCTTCCAGGCGATGGG 2146
Query 1056 GAAGACCTCCTTCTTCCTAGGTGAAGTGGGCAATGCAGCCAAGATGATGCTGATCGTGAACATGGTCCAAGGGA 1129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 GAAGACCTCCTTCTTCCTAGGTGAAGTGGGCAATGCAGCCAAGATGATGCTGATCGTGAACATGGTCCAAGGGA 2220
Query 1130 GCTTCATGGCCACTATTGCCGAGGGGCTGACCCTGGCCCAGGTGACAGGCCAGTCCCAGCAGACACTCTTGGAC 1203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 GCTTCATGGCCACTATTGCCGAGGGGCTGACCCTGGCCCAGGTGACAGGCCAGTCCCAGCAGACACTCTTGGAC 2294
Query 1204 ATCCTCAATCAGGGACAGTTGGCCAGCATCTTCCTGGACCAGAAGTGCCAAAATATCCTGCAAGGAAACTTTAA 1277
Sbjct 2295 -------------------------------------------------------------------------- 2294
Query 1278 GCCTGATTTCTACCTGAAATACATTCAGAAGGATCTCCGCTTAGCCATTGCGCTGGGTGATGCGGTCAACCATC 1351
Sbjct 2295 -------------------------------------------------------------------------- 2294
Query 1352 CGACTCCCATGGCAGCTGCAGCAAATGAGGTGTACAAAAGAGCCAAGGCGCTGGACCAGTCCGACAACGATATG 1425
Sbjct 2295 -------------------------------------------------------------------------- 2294
Query 1426 TCCGCCGTGTACCGAGCCTACATACAC 1452
Sbjct 2295 --------------------------- 2294
