Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12837
- Subject:
- XR_002957846.1
- Aligned Length:
- 3321
- Identities:
- 1253
- Gaps:
- 2068
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGCGCGCCGGCCCAGGAGGAAGCGAAGAAATGCCAACTCGACGTCCGCGCAGCCACTCCGGGGACACCAGGGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCGGGGGAGCAGCCTCCGGTCGCCCCAGGAGAACTTGCGGCGCGGGACCCCGCGCTCAGACGGCGCCTCCGAAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCGGCCGTCGGGAGGAGCGCTCCAAAGAACACGGGCGGCGGGAGCGGACGGGCGCGGACACCGGGGCCTCCCGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTGCGGCCAAGCAGAGTTGCCGGGCGCGGGAGCCCAGACCCGGCGGAGGCTGAGTTCCAGGCCGCGCCGAGCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCGTCAGGGTAGCTCACTGGCGCTGCGACGGGGCCGACCAGCGCCTCGGGCTCGGGAATGGCCCCGGGGCCCGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCCGGACCAACGGGCGTAACGGAAGCGCCGAGAGGGGAGGGGCGCGGAGTCCAAGACCCGGGGGCGGGGCGAGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGCGAGGCCGGCTCCCTCTCGCGCTCAGCCGGTCGCACCGTCGCCGCCGCCGCCGCCTCAGACCGCGGGCGCTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGTTGTCACGAGCCGAAGGGAGGGGGAAGGAGCCGGGAGTCTCTGCGCTCCGGCGCGCGGAGACCGCGGCGCTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCGTCACGTGCCCCTCGGTCGACCAATGATCCCCGGCGGGCGCGGTGACGTCAGAGTAGCGGCGTGGCCAGTGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAGCCGGCCCCCGTCACGTGGTCGGGCCCACTCCAATGGGCGGCGCCGGGGCGACTTGCTGTTCCCGGCGGCCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTGCGTCGGCGGTGGTTGGGTGGTAAGATGGCGGCTGTGAGTCTGCGGCTCGGCGACTTGGTGTGGGGGAAACT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CGGCCGATATCCTCCTTGGCCAGGAAAGATTGTTAATCCACCAAAGGACTTGAAGAAACCTCGCGGAAAGAAAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCTTCTTTGTGAAATTTTTTGGAACAGAAGATCATGCCTGGATCAAAGTGGAACAGCTGAAGCCATATCATGCT 962
Query 1 ------------ATGATAAAAATTAACAAGGGTAAACGATTCCAGCAAGCGGTAGATGCTGTCGAAGAGTTCCT 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CATAAAGAGGAAATGATAAAAATTAACAAGGGTAAACGATTCCAGCAAGCGGTAGATGCTGTCGAAGAGTTCCT 1036
Query 63 CAGGAGAGCCAAAGGGAAAGACCAGACGTCATCCCACAATTCTTCTGATGACAAGAATCGACGTAATTCCAGTG 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CAGGAGAGCCAAAGGGAAAGACCAGACGTCATCCCACAATTCTTCTGATGACAAGAATCGACGTAATTCCAGTG 1110
Query 137 AGGAGAGAAGTAGGCCAAACTCAGGTGATGAGAAGCGCAAACTTAGCCTGTCTGAAGGGAAGGTGAAGAAGAAC 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AGGAGAGAAGTAGGCCAAACTCAGGTGATGAGAAGCGCAAACTTAGCCTGTCTGAAGGGAAGGTGAAGAAGAAC 1184
Query 211 ATGGGAGAAGGAAAGAAGAGGGTGTCTTCAGGCTCTTCAGAGAGAGGCTCCAAATCCCCTCTGAAAAGAGCCCA 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 ATGGGAGAAGGAAAGAAGAGGGTGTCTTCAGGCTCTTCAGAGAGAGGCTCCAAATCCCCTCTGAAAAGAGCCCA 1258
Query 285 AGAGCAAAGTCCCCGGAAGCGGGGTCGGCCCCCAAAGGATGAGAAGGATCTCACCATCCCGGAGTCTAGTACCG 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AGAGCAAAGTCCCCGGAAGCGGGGTCGGCCCCCAAAGGATGAGAAGGATCTCACCATCCCGGAGTCTAGTACCG 1332
Query 359 TGAAGGGGATGATGGCCGGACCGATGGCCGCGTTTAAATGGCAGCCAACCGCAAGCGAGCCTGTTAAAGATGCA 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TGAAGGGGATGATGGCCGGACCGATGGCCGCGTTTAAATGGCAGCCAACCGCAAGCGAGCCTGTTAAAGATGCA 1406
Query 433 GATCCTCATTTCCATCATTTCCTGCTAAGCCAAACAGAGAAGCCAGCTGTCTGTTACCAGGCAATCACGAAGAA 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GATCCTCATTTCCATCATTTCCTGCTAAGCCAAACAGAGAAGCCAGCTGTCTGTTACCAGGCAATCACGAAGAA 1480
Query 507 GTTGAAAATATGTGAAGAGGAAACTGGCTCCACCTCCATCCAGGCAGCTGACAGCACAGCCGTGAATGGCAGCA 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 GTTGAAAATATGTGAAGAGGAAACTGGCTCCACCTCCATCCAGGCAGCTGACAGCACAGCCGTGAATGGCAGCA 1554
Query 581 TCACACCCACAGACAAAAAGATAGGATTTTTGGGCCTTGGTCTCATGGGAAGTGGAATCGTCTCCAACTTGCTA 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TCACACCCACAGACAAAAAGATAGGATTTTTGGGCCTTGGTCTCATGGGAAGTGGAATCGTCTCCAACTTGCTA 1628
Query 655 AAAATGGGTCACACAGTGACTGTCTGGAACCGCACTGCAGAGAAATGTGATTTGTTCATCCAGGAGGGGGCCCG 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 AAAATGGGTCACACAGTGACTGTCTGGAACCGCACTGCAGAGAAATGTGATTTGTTCATCCAGGAGGGGGCCCG 1702
Query 729 TCTGGGAAGAACCCCCGCTGAAGTCGTCTCAACCTGCGACATCACTTTCGCCTGCGTGTCGGATCCCAAGGCGG 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TCTGGGAAGAACCCCCGCTGAAGTCGTCTCAACCTGCGACATCACTTTCGCCTGCGTGTCGGATCCCAAGGCGG 1776
Query 803 CCAAGGAC------------------------------------------------------------------ 810
||||||||
Sbjct 1777 CCAAGGACGTAAGGACCCCCTCCCTCCCCTCAGCAACTCCGGGTCACAGCCAGGATTGCTGGCTGGCCTCTTCC 1850
Query 811 -------------------------------------------------------------------------- 810
Sbjct 1851 CCTCCTCCCCTGCACACCAAGTGAGTGTCCACATGTGGGGGGCTGAATTTCCCATCAGGGGCCATCTCCCATTG 1924
Query 811 -------------------------------------------------------------------------- 810
Sbjct 1925 TGAAGGGTGTTTGCATTAATTGAATACAGACTTCCTTTAATTCAGATCAAAGAATGAACACTACTAGGGCCCTT 1998
Query 811 -------------------------------------------------------------------------- 810
Sbjct 1999 GAAGTCTGTGCTGAAATGTGTCTTGAACAGGCTTCATGTGTTCTTGTTGAACTAGAAGCTTTGGAACTGAATGT 2072
Query 811 -------------------------------------------------------------------------- 810
Sbjct 2073 GCCTTTGGTCCAGGTGCCAAGCTTCTATGTTTAGCTGTCACTGTATTTGTATATTTTAGAAGTTCAAGTGTGGT 2146
Query 811 -------------------------------------------------------------------------- 810
Sbjct 2147 AGTCATCTTATTAAACTGGTGACTAGCCTAATCCAAGTAAATCCAAAGAAGTCCCCAAAGTAAATGCTGAGGTT 2220
Query 811 -------------------------------------------------------------------------- 810
Sbjct 2221 TATTCTTTTAAATGGGGTTTGTTTTTTTTTTTTTTTAAATAAAAAGAAATGCACACACTCACATAGATTCTTTT 2294
Query 811 -------------------------------------------------------------------------- 810
Sbjct 2295 TAAAGATAAATGGGAGCATGCGGGAAGTACTTTTCTATCCCTTGCTTATTTCATTGTTCTTCCCTTTTCAGCTG 2368
Query 811 -------------------------------------------------------------------------- 810
Sbjct 2369 ATAGAAATCAGGAAATGAGCCAAAACAGCAGCAGGATTCTGATCTGAGGTCTGTAGGGCTCCTGAGCATCTGCC 2442
Query 811 ----------------------------------------CTGGTGCTGGGCCCCAGTGGTGTGCTGCAAGGGA 844
||||||||||||||||||||||||||||||||||
Sbjct 2443 CGGGAGCCTGGGCTATTGCTTCTCCCTTGTGTCCCCACAGCTGGTGCTGGGCCCCAGTGGTGTGCTGCAAGGGA 2516
Query 845 TCCGCCCTGGGAAGTGCTACGTGGACATGTCAACAGTGGACGCTGACACCGTCACTGAGCTGGCCCAGGTGATT 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 TCCGCCCTGGGAAGTGCTACGTGGACATGTCAACAGTGGACGCTGACACCGTCACTGAGCTGGCCCAGGTGATT 2590
Query 919 GTGTCCAGGGGGGGGCGCTTTCTGGAAGCCCCCGTCTCAGGGAATCAGCAGCTGTCTAATGACGGGATGTTGGT 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 GTGTCCAGGGGGGGGCGCTTTCTGGAAGCCCCCGTCTCAGGGAATCAGCAGCTGTCTAATGACGGGATGTTGGT 2664
Query 993 GATCTTAGCGGCTGGAGACAGGGGCTTATATGAGGACTGCAGCAGCTGCTTCCAGGCGATGGGGAAGACCTCCT 1066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 GATCTTAGCGGCTGGAGACAGGGGCTTATATGAGGACTGCAGCAGCTGCTTCCAGGCGATGGGGAAGACCTCCT 2738
Query 1067 TCTTCCT------------------------------------------------------------------- 1073
|||||||
Sbjct 2739 TCTTCCTAGGTAACACGCCTGCACCTGTCAGGCCTGGAGCCTGGGGCCACATCTCCTCTGTTTCACACTGATGA 2812
Query 1074 -------------------------------------------------------------------------- 1073
Sbjct 2813 CAGCGTCAGTCCCACACGGCCTTTCTGCCGGGGACCCTGGGGAAGGTTTCCTTTCACCTGCATAGTCAGTGCGT 2886
Query 1074 --------------------------------------------------------AGGTGAAGTGGGCAATGC 1091
||||||||||||||||||
Sbjct 2887 GGAAGGAGGAAGAGCCAGTCTGTCGGGGGCAGGTGAAGGGGGCCTCCCCTGGAGAGAGGTGAAGTGGGCAATGC 2960
Query 1092 AGCCAAGATGATGCTGATCGTGAACATGGTCCAAGGGAGCTTCATGGCCACTATTGCCGAGGGGCTGACCCTGG 1165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 AGCCAAGATGATGCTGATCGTGAACATGGTCCAAGGGAGCTTCATGGCCACTATTGCCGAGGGGCTGACCCTGG 3034
Query 1166 CCCAGGTGACAGGCCAGTCCCAGCAGACACTCTTGGACATCCTCAATCAGGGACAGTTGGCCAGCATCTTCCTG 1239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 CCCAGGTGACAGGCCAGTCCCAGCAGACACTCTTGGACATCCTCAATCAGGGACAGTTGGCCAGCATCTTCCTG 3108
Query 1240 GACCAGAAGTGCCAAAATATCCTGCAAGGAAACTTTAAGCCTGATTTCTACCTGAAATACATTCAGAAGGATCT 1313
||||||||||||||
Sbjct 3109 GACCAGAAGTGCCA------------------------------------------------------------ 3122
Query 1314 CCGCTTAGCCATTGCGCTGGGTGATGCGGTCAACCATCCGACTCCCATGGCAGCTGCAGCAAATGAGGTGTACA 1387
Sbjct 3123 -------------------------------------------------------------------------- 3122
Query 1388 AAAGAGCCAAGGCGCTGGACCAGTCCGACAACGATATGTCCGCCGTGTACCGAGCCTACATACAC 1452
Sbjct 3123 ----------------------------------------------------------------- 3122
