Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12840
- Subject:
- NM_001286547.3
- Aligned Length:
- 1425
- Identities:
- 879
- Gaps:
- 546
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGATAAACACAGGAACTCAAATGGATTTAGAGGTTAAAGGAGTTGCTGCCACTTCTAGGAGCCAAATTCAGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATTCTTTGGAAGAAAGAAGCCTCTACAACAAAGGTGGACTTCTGAGTCATGGACAAACCAGAATTCTTGCCCAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGTGGTCCCACGACTTGATTTGGGAAGCCTTGTTGACTCTGATGATGAGGATCAGAACATAATACCTGAAAAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTGCCAGCACCAACAGACAAATGTAAACTAAAATATCAGCAATGTAAAACTGAAATTAAAGAGGGCTATAAGCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTATAGTCAGAGAAATGCAGAAAATACAAAATCAAATGTTACACATAAACAGTCTCCAAGAAACAAGATAGATG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAAAGTGTGTGCAAGATGAAGAAGCCAACACAGATGACCTTACGACTCTGGATAGGAAAGCCATCTTACAGCAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGTTATGCAGACAACTCTTGCGATAAACAACAGAGGGCAAGAAAATTGGATGCAGAAATTGTGGCTGCAGAGAA 518
Query 1 ----------------------------ATGATAGACCACTTATCTAGGGCTGTCATCAGTGATCCAGAGCAAA 46
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GAAGAAACAGATTGTTGCAGAGCAAGTGATGATAGACCACTTATCTAGGGCTGTCATCAGTGATCCAGAGCAAA 592
Query 47 ATTTAGCCATTGAGCAAAAAGAAAGTGATCATATCCTTCCAGATTCAAAGATGACACCTCTTCGATTTAGAAAA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATTTAGCCATTGAGCAAAAAGAAAGTGATCATATCCTTCCAGATTCAAAGATGACACCTCTTCGATTTAGAAAA 666
Query 121 AGAACACTACATGAAACAAAGATAAGAACTCATTCTACATTAACTGAAAATGTGCTTTCTCATAAATTACAGTT 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGAACACTACATGAAACAAAGATAAGAACTCATTCTACATTAACTGAAAATGTGCTTTCTCATAAATTACAGTT 740
Query 195 TGATGGTAGGATCGTATCACGAACAAATGTGCTTCCTTTTATTCAAAAAAGCATTTATAGTCATCAGTGTGGAC 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGATGGTAGGATCGTATCACGAACAAATGTGCTTCCTTTTATTCAAAAAAGCATTTATAGTCATCAGTGTGGAC 814
Query 269 GAAGAAAAGGAAAACAATACCGACTTGGTGATTTTTATGTTGGTGCAACCTTGACATTTTTGAGTTCTGATCAT 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GAAGAAAAGGAAAACAATACCGACTTGGTGATTTTTATGTTGGTGCAACCTTGACATTTTTGAGTTCTGATCAT 888
Query 343 CTCAGCCTTCCAGAAAGCATCAAAGAAAACACATTACTTAAACTCCGAATCACAAATATTGATCAAATAGCTTT 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CTCAGCCTTCCAGAAAGCATCAAAGAAAACACATTACTTAAACTCCGAATCACAAATATTGATCAAATAGCTTT 962
Query 417 GGATTCTCTCAAAACTGCTTCTATGGAACAGGAGGATGATATAATCATTCAAGAAACCAATGATAGGCTGGTCT 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GGATTCTCTCAAAACTGCTTCTATGGAACAGGAGGATGATATAATCATTCAAGAAACCAATGATAGGCTGGTCT 1036
Query 491 TCAAAGCAATTCAAGATGTGCTAAAAGAAAAACTACATAAAAGAGGTGTTCGTATTTTGACTGGATTGGGAAAA 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TCAAAGCAATTCAAGATGTGCTAAAAGAAAAACTACATAAAAGAGGTGTTCGTATTTTGACTGGATTGGGAAAA 1110
Query 565 TATTTTCAACAGTTGGACAAGGAAGGAAATGGACTTTTAGATAAGGCAGATTTTAAGCAAGCTCTAAAAGTGTT 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TATTTTCAACAGTTGGACAAGGAAGGAAATGGACTTTTAGATAAGGCAGATTTTAAGCAAGCTCTAAAAGTGTT 1184
Query 639 TCACTTAGAAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCAATGGCAAGGTTG 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TCACTTAGAAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCAATGGCAAGGTTG 1258
Query 713 ATTATGGAGAATTCAAACGTGGTATTATTGGTGAAATGAATGAATACAGGAAATCATATGTTCGAAAGGCCTTT 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 ATTATGGAGAATTCAAACGTGGTATTATTGGTGAAATGAATGAATACAGGAAATCATATGTTCGAAAGGCCTTT 1332
Query 787 ATGAAACTGGATTTCAACAAAAGTGGCAGTGTGCCTATTATAAACATAAGAAAATGTTACTGTGCAAAGAAGCA 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 ATGAAACTGGATTTCAACAAAAGTGGCAGTGTGCCTATTATAAACATAAGAAAATGTTACTGTGCAAAGAAGCA 1406
Query 861 TTCTCAAGTAATTTCAGGT 879
|||||||||||||||||||
Sbjct 1407 TTCTCAAGTAATTTCAGGT 1425